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Computer-Aided Drug Discovery and Development

  • Shuxing ZhangEmail author
Protocol
Part of the Methods in Molecular Biology book series (MIMB, volume 716)

Abstract

Computer-aided approaches have been widely used in pharmaceutical research to improve the efficiency of the drug discovery and development pipeline. To identify and design small molecules as clinically effective therapeutics, various computational methods have been evaluated as promising strategies, depending on the purpose and systems of interest. Both ligand and structure-based drug design approaches are powerful technologies, which can be applied to virtual screening for lead identification and optimization. Here, we review the progress in this field and summarize the application of some new technologies we developed. These state-of-the-art tools have been used for the discovery and development of active agents for various diseases, in particular for cancer therapies. The described protocols are appropriate for all drug discovery stages, but expertise is still needed to perform the studies based on the targets of interest.

Key words

Computer-aided drug discovery High-throughput screening Ligand-based drug design Molecular docking Quantitative structure–activity relationship Structure-based drug design, Virtual screening 

Notes

Acknowledgments

We are grateful to John Morrow for proofreading this chapter, and this work was supported in part by MD Anderson faculty startup fund.

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© Springer Science+Business Media, LLC 2011

Authors and Affiliations

  1. 1.Department of Experimental TherapeuticsM.D. Anderson Cancer CenterHoustonUSA

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