Volume 10, issue 1, December 2015
126 articles in this issue
-
-
Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
Authors (first, second and last of 12)
- William B Whitman
- Tanja Woyke
- Nikos C Kyrpides
- Content type: Commentary
- Open Access
- Published: 17 May 2015
- Article: 26
-
Meeting report: Identifying practical applications of ontologies for biodiversity informatics
Authors (first, second and last of 7)
- John Deck
- Robert Guralnick
- John Wieczorek
- Content type: Meeting report
- Open Access
- Published: 17 May 2015
- Article: 25
-
High-quality permanent draft genome sequence of Bradyrhizobium sp. Th.b2, a microsymbiont of Amphicarpaea bracteata collected in Johnson City, New York
Authors (first, second and last of 12)
- Rui Tian
- Matthew Parker
- Wayne Reeve
- Content type: Short genome report
- Open Access
- Published: 16 May 2015
- Article: 24
-
High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov.
Authors (first, second and last of 15)
- Simon J McIlroy
- Alla Lapidus
- Per H Nielsen
- Content type: Short genome report
- Open Access
- Published: 27 February 2015
- Article: 23
-
Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E
Authors (first, second and last of 8)
- Li Lin
- Chunyan Wei
- Qianli An
- Content type: Short genome report
- Open Access
- Published: 08 May 2015
- Article: 22
-
High quality draft genome sequence of Leucobacter chironomi strain MM2LBT (DSM 19883T) isolated from a Chironomus sp. egg mass
Authors (first, second and last of 13)
- Sivan Laviad
- Alla Lapidus
- Malka Halpern
- Content type: Short genome report
- Open Access
- Published: 08 May 2015
- Article: 21
-
Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards
Authors (first, second and last of 14)
- Petra ten Hoopen
- Stéphane Pesant
- Guy Cochrane
- Content type: Commentary
- Open Access
- Published: 08 May 2015
- Article: 20
-
Large-scale contamination of microbial isolate genomes by Illumina PhiX control
Authors (first, second and last of 5)
- Supratim Mukherjee
- Marcel Huntemann
- Amrita Pati
- Content type: Commentary
- Open Access
- Published: 30 March 2015
- Article: 18
-
Genome sequence of the Roseovarius mucosus type strain (DSM 17069T), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii
Authors (first, second and last of 7)
- Thomas Riedel
- Stefan Spring
- Hans-Peter Klenk
- Content type: Short genome report
- Open Access
- Published: 19 March 2015
- Article: 17
-
High quality draft genome of Lactobacillus kunkeei EFB6, isolated from a German European foulbrood outbreak of honeybees
Authors (first, second and last of 7)
- Marvin Djukic
- Anja Poehlein
- Rolf Daniel
- Content type: Short genome report
- Open Access
- Published: 19 February 2015
- Article: 16
-
Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S
Authors (first, second and last of 8)
- Tobias Goris
- Bastian Hornung
- Gabriele Diekert
- Content type: Short genome report
- Open Access
- Published: 24 February 2015
- Article: 15
-
A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey
Authors (first, second and last of 9)
- Wayne Reeve
- Julie Ardley
- Nikos C Kyrpides
- Content type: Commentary
- Open Access
- Published: 09 February 2015
- Article: 14
-
High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512
Authors (first, second and last of 13)
- Sofie E De Meyer
- Elena Fabiano
- Wayne Reeve
- Content type: Short genome report
- Open Access
- Published: 11 April 2015
- Article: 13
-
Draft genome sequence of Mesotoga strain PhosAC3, a mesophilic member of the bacterial order Thermotogales, isolated from a digestor treating phosphogypsum in Tunisia
Authors (first, second and last of 11)
- Wajdi Ben Hania
- Khaled Fadhlaoui
- Gaël Erauso
- Content type: Short genome report
- Open Access
- Published: 01 May 2015
- Article: 12
-
Draft genome sequences for the obligate bacterial predators Bacteriovorax spp. of four phylogenetic clusters
Authors (first, second and last of 9)
- Huan Chen
- Lauren M Brinkac
- Jonathan H Badger
- Content type: Short genome report
- Open Access
- Published: 24 March 2015
- Article: 11
-
Complete genome sequence of Pseudomonas fluorescens strain PICF7, an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae
Authors (first, second and last of 7)
- Pedro Manuel MartÃnez-GarcÃa
- David Ruano-Rosa
- Jesús Mercado-Blanco
- Content type: Short genome report
- Open Access
- Published: 06 February 2015
- Article: 10
-
High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil
Authors (first, second and last of 11)
- Fan Zhang
- Sanbao Su
- Yuehui She
- Content type: Short genome report
- Open Access
- Published: 27 February 2015
- Article: 9
-
High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
Authors (first, second and last of 19)
- Supratim Mukherjee
- Alla Lapidus
- Amrita Pati
- Content type: Extended genome report
- Open Access
- Published: 09 February 2015
- Article: 8
-
Complete genome sequence and description of Salinispira pacifica gen. nov., sp. nov., a novel spirochaete isolated form a hypersaline microbial mat
Authors (first, second and last of 9)
- Wajdi Ben Hania
- Manon Joseph
- Stefan Spring
- Content type: Extended genome report
- Open Access
- Published: 09 February 2015
- Article: 7
-
Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12
Authors
- Jianda Ji
- Rui Zhang
- Nianzhi Jiao
- Content type: Short genome report
- Open Access
- Published: 21 January 2015
- Article: 6
-
Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147T
Authors (first, second and last of 6)
- Marcus Persicke
- Andreas Albersmeier
- Christian Rückert
- Content type: Short genome report
- Open Access
- Published: 21 January 2015
- Article: 5
-
Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen
Authors (first, second and last of 4)
- Maja Nielsen
- Lars Schreiber
- Andreas Schramm
- Content type: Short genome report
- Open Access
- Published: 21 January 2015
- Article: 4
-
Complete genome sequence of the fish pathogen Flavobacterium psychrophilum ATCC 49418T
Authors (first, second and last of 5)
- Anson KK Wu
- Andrew M Kropinski
- Janet I MacInnes
- Content type: Short genome report
- Open Access
- Published: 21 January 2015
- Article: 3
-
Genome sequence and description of the mosquitocidal and heavy metal tolerant strain Lysinibacillus sphaericus CBAM5
Authors
- Tito David Peña-Montenegro
- LucÃa Lozano
- Jenny Dussán
- Content type: Extended genome report
- Open Access
- Published: 20 January 2015
- Article: 2
-
Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China
Authors (first, second and last of 18)
- Xiao-Yang Gao
- Xiao-Yang Zhi
- Wen-Jun Li
- Content type: Short genome report
- Open Access
- Published: 20 January 2015
- Article: 1