1. Automated Removal of Noisy Data in Phylogenomic Analyses

   • Vadim V. Goremykin
   • Svetlana V. Nikiforova
   • Olaf R. P. Bininda-Emonds

   OriginalPaper 26 October 2010 Pages: 319 - 331

   

2. Genetic and Evolutionary Correlates of Fine-Scale Recombination Rate Variation in Drosophila persimilis

   • Laurie S. Stevison
   • Mohamed A. F. Noor

   OriginalPaper 02 October 2010 Pages: 332 - 345

   

3. Revisiting the Thermodynamic Theory of Optimal ATP Stoichiometries by Analysis of Various ATP-Producing Metabolic Pathways

   • Sarah Werner
   • Gabriele Diekert
   • Stefan Schuster

   OriginalPaper 05 October 2010 Pages: 346 - 355

   

4. Loss of Octarepeats in Two Processed Prion Pseudogenes in the Red Squirrel, Sciurus vulgaris

   • Ole Madsen
   • Timothy T. Kortum
   • Wilfried W. de Jong

   OriginalPaper Open access 28 September 2010 Pages: 356 - 363

   

5. Evaluation of Models of the Mechanisms Underlying Intron Loss and Gain in Aspergillus Fungi

   • Lei-Ying Zhang
   • Yu-Fei Yang
   • Deng-Ke Niu

   OriginalPaper 23 September 2010 Pages: 364 - 373

   

6. Evolution of Dopamine-Related Systems: Biosynthesis, Degradation and Receptors

   • Xianghui Ma
   • Zhiwen Wang
   • Xinbo Zhang

   OriginalPaper 02 October 2010 Pages: 374 - 384

   

7. Comparative Genomics of Marine Mussels (Mytilus spp.) Gender Associated mtDNA: Rapidly Evolving atp8

   • Beata Śmietanka
   • Artur Burzyński
   • Roman Wenne

   OriginalPaper 08 October 2010 Pages: 385 - 400

   

8. A Tandem Duplication of Manganese Superoxide Dismutase in Nosema bombycis and Its Evolutionary Origins

   • Heng Xiang
   • Guoqing Pan
   • Zhonghuai Xiang

   OriginalPaper 23 October 2010 Pages: 401 - 414

   

9. Intronic AT Skew is a Defendable Proxy for Germline Transcription but does not Predict Crossing-Over or Protein Evolution Rates in Drosophila melanogaster

   • Claudia C. Weber
   • Laurence D. Hurst

   OriginalPaper 12 October 2010 Pages: 415 - 426

   

10. Evolution of Conserved Non-Coding Sequences Within the Vertebrate Hox Clusters Through the Two-Round Whole Genome Duplications Revealed by Phylogenetic Footprinting Analysis

    • Masatoshi Matsunami
    • Kenta Sumiyama
    • Naruya Saitou

    OriginalPaper 28 October 2010 Pages: 427 - 436

    

11. Lack of Evidence for Sign Epistasis Between Beneficial Mutations in an RNA Bacteriophage

    • Andrea J. Betancourt

    OriginalPaper 12 October 2010 Pages: 437 - 443

    

12. Selection and the Cell Cycle: Positive Darwinian Selection in a Well-Known DNA Damage Response Pathway

    • Mary J. O’Connell

    OriginalPaper 04 November 2010 Pages: 444 - 457