Volume 6, issue 2, February 2005

22 articles in this issue

Articles selected by Faculty of 1000: plant comparative mitochondrial genomics; open source proteomics database; identifying disease-associated enzymes; predicting microRNA targets; genome annotation using polymorphisms
- Content type: Paper report
- Published: 21 January 2005
- Article: 309
Articles selected by Faculty of 1000: nuclear microRNA processing; transposon mutagenesis in Helicobacter; Saccharomyces gene expression regulation; molecular convergent evolution; linkage disequilibrium in dogs
- Content type: Paper report
- Published: 06 January 2005
- Article: 308
Living on the edge

Authors
- Gino Poulin
- Julie Ahringer
- Content type: Meeting report
- Published: 14 January 2005
- Article: 307
Histones: should I stay or should I go?

Authors
- Bing Li
- Chun Ruan
- Jerry L Workman
- Content type: Meeting report
- Published: 14 January 2005
- Article: 306
The vascular endothelial growth factor (VEGF) family: angiogenic factors in health and disease

Authors
- David IR Holmes
- Ian Zachary
- Content type: Protein family review
- Published: 01 February 2005
- Article: 209
A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea

Authors
- Ludmila Chistoserdova
- Julia A Vorholt
- Mary E Lidstrom
- Content type: Minireview
- Published: 01 February 2005
- Article: 208
Insights into vertebrate evolution from the chicken genome sequence

Authors
- Rebecca F Furlong
- Content type: Minireview
- Published: 31 January 2005
- Article: 207
Genome-wide analysis of the context-dependence of regulatory networks

Authors
- Balázs Papp
- Stephen Oliver
- Content type: Minireview
- Published: 27 January 2005
- Article: 206
Temporal and spatial patterning of an organ by a single transcription factor

Authors
- Diya Banerjee
- Frank J Slack
- Content type: Minireview
- Published: 25 January 2005
- Article: 205
Tsunami

Authors
- Gregory A Petsko
- Content type: Comment
- Published: 31 January 2005
- Article: 104
Comparison of the oxidative phosphorylation (OXPHOS) nuclear genes in the genomes of Drosophila melanogaster, Drosophila pseudoobscura and Anopheles gambiae

Authors (first, second and last of 4)
- Gaetano Tripoli
- Domenica D'Elia
- Corrado Caggese
- Content type: Research
- Open Access
- Published: 31 January 2005
- Article: R11
Identifying genetic networks underlying myometrial transition to labor

Authors (first, second and last of 8)
- Nathan Salomonis
- Nathalie Cotte
- Bruce R Conklin
- Content type: Research
- Open Access
- Published: 28 January 2005
- Article: R12
Variation in tissue-specific gene expression among natural populations

Authors
- Andrew Whitehead
- Douglas L Crawford
- Content type: Research
- Open Access
- Published: 26 January 2005
- Article: R13
Accelerated evolution associated with genome reduction in a free-living prokaryote

Authors
- Alexis Dufresne
- Laurence Garczarek
- Frédéric Partensky
- Content type: Research
- Open Access
- Published: 14 January 2005
- Article: R14
Polarized monocyte response to cytokine stimulation

Authors (first, second and last of 8)
- Dirk Nagorsen
- Sara Deola
- Monica C Panelli
- Content type: Research
- Open Access
- Published: 21 January 2005
- Article: R15
Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

Authors (first, second and last of 5)
- Sung E Choe
- Michael Boutros
- Marc S Halfon
- Content type: Research
- Open Access
- Published: 28 January 2005
- Article: R16
Identification of ciliated sensory neuron-expressed genes in Caenorhabditis elegans using targeted pull-down of poly(A) tails

Authors (first, second and last of 4)
- Hirofumi Kunitomo
- Hiroko Uesugi
- Yuichi Iino
- Content type: Method
- Open Access
- Published: 31 January 2005
- Article: R17
Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach

Authors
- Olivier Elemento
- Saeed Tavazoie
- Content type: Method
- Open Access
- Published: 26 January 2005
- Article: R18
A universal method for automated gene mapping

Authors (first, second and last of 7)
- Peder Zipperlen
- Knud Nairz
- Alex Hajnal
- Content type: Method
- Open Access
- Published: 17 January 2005
- Article: R19
Genomic analysis of early murine mammary gland development using novel probe-level algorithms

Authors (first, second and last of 6)
- Stephen R Master
- Alexander J Stoddard
- Lewis A Chodosh
- Content type: Method
- Open Access
- Published: 01 February 2005
- Article: R20
An ontology for cell types

Authors
- Jonathan Bard
- Seung Y Rhee
- Michael Ashburner
- Content type: Method
- Open Access
- Published: 14 January 2005
- Article: R21
This is part of 1 collection:
Ontologies
Phylogeny of the M superhaplogroup inferred from complete mitochondrial genome sequence of Indian specific lineages

Authors (first, second and last of 5)
- Revathi Rajkumar
- Jheelam Banerjee
- VK Kashyap
- Content type: Deposited research article
- Published: 23 December 2004
- Article: P3

Volume 6, issue 2, February 2005

Articles selected by Faculty of 1000: plant comparative mitochondrial genomics; open source proteomics database; identifying disease-associated enzymes; predicting microRNA targets; genome annotation using polymorphisms

Articles selected by Faculty of 1000: nuclear microRNA processing; transposon mutagenesis in Helicobacter; Saccharomyces gene expression regulation; molecular convergent evolution; linkage disequilibrium in dogs

Living on the edge

Histones: should I stay or should I go?

The vascular endothelial growth factor (VEGF) family: angiogenic factors in health and disease

A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea

Insights into vertebrate evolution from the chicken genome sequence

Genome-wide analysis of the context-dependence of regulatory networks

Temporal and spatial patterning of an organ by a single transcription factor

Tsunami

Comparison of the oxidative phosphorylation (OXPHOS) nuclear genes in the genomes of Drosophila melanogaster, Drosophila pseudoobscura and Anopheles gambiae

Identifying genetic networks underlying myometrial transition to labor

Variation in tissue-specific gene expression among natural populations

Accelerated evolution associated with genome reduction in a free-living prokaryote

Polarized monocyte response to cytokine stimulation

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

Identification of ciliated sensory neuron-expressed genes in Caenorhabditis elegans using targeted pull-down of poly(A) tails

Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach

A universal method for automated gene mapping

Genomic analysis of early murine mammary gland development using novel probe-level algorithms

An ontology for cell types

Phylogeny of the M superhaplogroup inferred from complete mitochondrial genome sequence of Indian specific lineages

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