Volume 11, issue 1, December 2010
104 articles in this issue
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The Renilla luciferase gene as a reference gene for normalization of gene expression in transiently transfected cells
Authors (first, second and last of 7)
- Meesbah Jiwaji
- Rónán Daly
- Andrew R Pitt
- Content type: Methodology article
- Open Access
- Published: 31 December 2010
- Article: 103
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A single hydrophobic cleft in the Escherichia coli processivity clamp is sufficient to support cell viability and DNA damage-induced mutagenesis in vivo
Authors
- Mark D Sutton
- Jill M Duzen
- Sarah K Scouten Ponticelli
- Content type: Research article
- Open Access
- Published: 29 December 2010
- Article: 102
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The CTCF insulator protein forms an unusual DNA structure
Authors
- Melissa J MacPherson
- Paul D Sadowski
- Content type: Research article
- Open Access
- Published: 21 December 2010
- Article: 101
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qPCR in gastrointestinal stromal tumors: Evaluation of reference genes and expression analysis of KIT and the alternative receptor tyrosine kinases FLT3, CSF1-R, PDGFRB, MET and AXL
Authors (first, second and last of 9)
- Jana Fassunke
- Marie-Christine Blum
- Sabine Merkelbach-Bruse
- Content type: Research article
- Open Access
- Published: 20 December 2010
- Article: 100
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A thymus-specific noncoding RNA, Thy-ncR1, is a cytoplasmic riboregulator of MFAP4 mRNA in immature T-cell lines
Authors (first, second and last of 7)
- Kazuma Aoki
- Akira Harashima
- Tetsuro Hirose
- Content type: Research article
- Open Access
- Published: 16 December 2010
- Article: 99
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Characterization, phylogeny, alternative splicing and expression of Sox30 gene
Authors (first, second and last of 6)
- Fei Han
- Zhijian Wang
- Deshou Wang
- Content type: Research article
- Open Access
- Published: 11 December 2010
- Article: 98
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Structure and expression of two nuclear receptor genes in marsupials: insights into the evolution of the antisense overlap between the α-thyroid hormone receptor and Rev-erbα
Authors (first, second and last of 4)
- Brandon C Rindfleisch
- M Scott Brown
- Stephen H Munroe
- Content type: Research article
- Open Access
- Published: 10 December 2010
- Article: 97
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Identifying novel genes in C. elegans using SAGE tags
Authors
- Matthew J Nesbitt
- Donald G Moerman
- Nansheng Chen
- Content type: Research article
- Open Access
- Published: 10 December 2010
- Article: 96
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Overexpression of miR-128 specifically inhibits the truncated isoform of NTRK3 and upregulates BCL2 in SH-SY5Y neuroblastoma cells
Authors (first, second and last of 6)
- Monica Guidi
- Margarita Muiños-Gimeno
- Yolanda Espinosa-Parrilla
- Content type: Research article
- Open Access
- Published: 10 December 2010
- Article: 95
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A mechanism for ramified rolling circle amplification
Authors (first, second and last of 4)
- Thomas P Beals
- James H Smith
- David J Lane
- Content type: Research article
- Open Access
- Published: 07 December 2010
- Article: 94
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Cell- and region-specific miR30-based gene knock-down with temporal control in the rat brain
Authors (first, second and last of 4)
- Beihui Liu
- Haibo Xu
- Sergey Kasparov
- Content type: Research article
- Open Access
- Published: 06 December 2010
- Article: 93
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Rrd1 isomerizes RNA polymerase II in response to rapamycin
Authors (first, second and last of 5)
- Nathalie Jouvet
- Jeremie Poschmann
- Dindial Ramotar
- Content type: Research article
- Open Access
- Published: 03 December 2010
- Article: 92
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Essential role for ALCAM gene silencing in megakaryocytic differentiation of K562 cells
Authors (first, second and last of 6)
- Fang Tan
- Samit Ghosh
- Solomon F Ofori-Acquah
- Content type: Research article
- Open Access
- Published: 02 December 2010
- Article: 91
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Selection of reliable reference genes during THP-1 monocyte differentiation into macrophages
Authors
- Marten B Maeß
- Stefanie Sendelbach
- Stefan Lorkowski
- Content type: Research article
- Open Access
- Published: 01 December 2010
- Article: 90
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Subcellular distribution of nuclear import-defective isoforms of the promyelocytic leukemia protein
Authors (first, second and last of 4)
- Ã…sne Jul-Larsen
- Amra Grudic
- Stig O Bøe
- Content type: Research article
- Open Access
- Published: 21 November 2010
- Article: 89
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Expression of 3-hydroxy-3-methylglutaryl-CoA reductase, p-hydroxybenzoate-m-geranyltransferase and genes of phenylpropanoid pathway exhibits positive correlation with shikonins content in arnebia [Arnebia euchroma (Royle) Johnston]
Authors (first, second and last of 9)
- Ravi S Singh
- Rishi K Gara
- Sanjay Kumar
- Content type: Research article
- Open Access
- Published: 21 November 2010
- Article: 88
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Translational independence between overlapping genes for a restriction endonuclease and its transcriptional regulator
Authors
- Meenakshi K Kaw
- Robert M Blumenthal
- Content type: Research article
- Open Access
- Published: 19 November 2010
- Article: 87
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Germline transformation of the stalk-eyed fly, Teleopsis dalmanni
Authors
- Ian A Warren
- Kevin Fowler
- Hazel Smith
- Content type: Methodology article
- Open Access
- Published: 16 November 2010
- Article: 86
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A tryptophan-rich peptide acts as a transcription activation domain
Authors (first, second and last of 4)
- Chen-Huan Lin
- Grace Lin
- Chien-Chia Wang
- Content type: Research article
- Open Access
- Published: 16 November 2010
- Article: 85
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Targeting of highly conserved Dengue virus sequences with anti-Dengue virus trans-splicing group I introns
Authors (first, second and last of 5)
- James R Carter
- James H Keith
- Malcolm J Fraser Jr
- Content type: Research article
- Open Access
- Published: 15 November 2010
- Article: 84
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Identification of amino acid residues in protein SRP72 required for binding to a kinked 5e motif of the human signal recognition particle RNA
Authors
- Elena Iakhiaeva
- Alexei Iakhiaev
- Christian Zwieb
- Content type: Research article
- Open Access
- Published: 13 November 2010
- Article: 83
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Single-cell qPCR on dispersed primary pituitary cells -an optimized protocol
Authors
- Kjetil Hodne
- Trude M Haug
- Finn-Arne Weltzien
- Content type: Methodology article
- Open Access
- Published: 12 November 2010
- Article: 82
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Regulation of PURA gene transcription by three promoters generating distinctly spliced 5-prime leaders: a novel means of fine control over tissue specificity and viral signals
Authors (first, second and last of 7)
- Margaret J Wortman
- Laura K Hanson
- Edward M Johnson
- Content type: Research article
- Open Access
- Published: 09 November 2010
- Article: 81
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Sex-biased transcription enhancement by a 5' tethered Gal4-MOF histone acetyltransferase fusion protein in Drosophila
Authors (first, second and last of 7)
- Anja H Schiemann
- Fang Li
- Maxwell J Scott
- Content type: Research article
- Open Access
- Published: 09 November 2010
- Article: 80
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Regulation of CEACAM1 transcription in human breast epithelial cells
Authors (first, second and last of 4)
- Marieta Gencheva
- Charng-Jui Chen
- John E Shively
- Content type: Research article
- Open Access
- Published: 04 November 2010
- Article: 79
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Identification of a variant form of tyrosine phosphatase LYP
Authors (first, second and last of 6)
- Shaofeng Wang
- Hongbo Dong
- Zhizhuang J Zhao
- Content type: Research article
- Open Access
- Published: 02 November 2010
- Article: 78
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A direct comparison of strategies for combinatorial RNA interference
Authors (first, second and last of 4)
- Luke S Lambeth
- Nick J Van Hateren
- Venugopal Nair
- Content type: Methodology article
- Open Access
- Published: 11 October 2010
- Article: 77
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Evaluation of endogenous references for gene expression profiling in different tissues of the oriental fruit fly Bactrocera dorsalis (Diptera: Tephritidae)
Authors (first, second and last of 4)
- Guang-Mao Shen
- Hong-Bo Jiang
- Jin-Jun Wang
- Content type: Research article
- Open Access
- Published: 06 October 2010
- Article: 76
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The use of reference gene selection programs to study the silvering transformation in a freshwater eel Anguilla australis: a cautionary tale
Authors
- Alvin N Setiawan
- P Mark Lokman
- Content type: Research article
- Open Access
- Published: 22 September 2010
- Article: 75
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MIQE précis: Practical implementation of minimum standard guidelines for fluorescence-based quantitative real-time PCR experiments
Authors (first, second and last of 8)
- Stephen A Bustin
- Jean-François Beaulieu
- Stefan Toegel
- Content type: Editorial
- Open Access
- Published: 21 September 2010
- Article: 74
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Reference gene selection for quantitative reverse transcription-polymerase chain reaction normalization during in vitro adventitious rooting in Eucalyptus globulus Labill
Authors (first, second and last of 6)
- Márcia R de Almeida
- Carolina M Ruedell
- Arthur G Fett-Neto
- Content type: Research article
- Open Access
- Published: 20 September 2010
- Article: 73
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Effects on mitochondrial transcription of manipulating mTERF protein levels in cultured human HEK293 cells
Authors (first, second and last of 4)
- Anne K Hyvärinen
- Mona K Kumanto
- Howard T Jacobs
- Content type: Research article
- Open Access
- Published: 16 September 2010
- Article: 72
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Molecular cloning and tissue expression of the fatty acid-binding protein (Es-FABP) gene in female Chinese mitten crab (Eriocheir sinensis)
Authors (first, second and last of 7)
- Ya-Nan Gong
- Wei-Wei Li
- Qun Wang
- Content type: Research article
- Open Access
- Published: 16 September 2010
- Article: 71
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High-resolution melting curve analysis for rapid detection of mutations in a Medaka TILLING library
Authors (first, second and last of 11)
- Tomoko Ishikawa
- Yasuhiro Kamei
- Takeshi Todo
- Content type: Research article
- Open Access
- Published: 15 September 2010
- Article: 70
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Identification of two Amino Acids in the C-terminal Domain of Mouse CRY2 Essential for PER2 Interaction
Authors (first, second and last of 7)
- Natali Ozber
- Ibrahim Baris
- Ibrahim H Kavakli
- Content type: Research article
- Open Access
- Published: 14 September 2010
- Article: 69
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Genome-wide search identifies Ccnd2 as a direct transcriptional target of Elf5 in mouse mammary gland
Authors (first, second and last of 9)
- Rosalba Escamilla-Hernandez
- Rumela Chakrabarti
- Satrajit Sinha
- Content type: Research article
- Open Access
- Published: 10 September 2010
- Article: 68
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The chicken miR-150 targets the avian orthologue of the functional zebrafish MYB 3'UTR target site
Authors (first, second and last of 6)
- Audrey Guillon-Munos
- Ginette Dambrine
- Denis Rasschaert
- Content type: Research article
- Open Access
- Published: 02 September 2010
- Article: 67
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EGF regulates survivin stability through the Raf-1/ERK pathway in insulin-secreting pancreatic β-cells
Authors (first, second and last of 9)
- Haijuan Wang
- Katarina Gambosova
- Rachel A Altura
- Content type: Research article
- Open Access
- Published: 31 August 2010
- Article: 66
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Two storage hexamerins from the beet armyworm Spodoptera exigua: Cloning, characterization and the effect of gene silencing on survival
Authors
- Bin Tang
- Shigui Wang
- Fan Zhang
- Content type: Research article
- Open Access
- Published: 31 August 2010
- Article: 65
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L1CAM expression in endometrial carcinomas is regulated by usage of two different promoter regions
Authors (first, second and last of 6)
- Marco Pfeifer
- Uwe Schirmer
- Peter Altevogt
- Content type: Research article
- Open Access
- Published: 27 August 2010
- Article: 64
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Functional and cellular characterization of human Retinoic Acid Induced 1 (RAI1) mutations associated with Smith-Magenis Syndrome
Authors (first, second and last of 8)
- Paulina Carmona-Mora
- Carolina A Encina
- Katherina Walz
- Content type: Research article
- Open Access
- Published: 25 August 2010
- Article: 63
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Mutational analysis of an archaeal minichromosome maintenance protein exterior hairpin reveals critical residues for helicase activity and DNA binding
Authors (first, second and last of 4)
- Aaron S Brewster
- Ian M Slaymaker
- Xiaojiang S Chen
- Content type: Research article
- Open Access
- Published: 18 August 2010
- Article: 62
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EF1α and RPL13a represent normalization genes suitable for RT-qPCR analysis of bone marrow derived mesenchymal stem cells
Authors (first, second and last of 7)
- Kevin M Curtis
- Lourdes A Gomez
- Paul C Schiller
- Content type: Methodology article
- Open Access
- Published: 17 August 2010
- Article: 61
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Determination of reference genes for circadian studies in different tissues and mouse strains
Authors (first, second and last of 7)
- Rok Kosir
- Jure Acimovic
- Damjana Rozman
- Content type: Research article
- Open Access
- Published: 16 August 2010
- Article: 60
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Effect of experimental treatment on GAPDH mRNA expression as a housekeeping gene in human diploid fibroblasts
Authors (first, second and last of 4)
- Azalina Zainuddin
- Kien Hui Chua
- Suzana Makpol
- Content type: Research article
- Open Access
- Published: 14 August 2010
- Article: 59
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Homologous illegitimate random integration of foreign DNA into the X chromosome of a transgenic mouse line
Authors
- Bowen Yan
- Defa Li
- Kemian Gou
- Content type: Research article
- Open Access
- Published: 13 August 2010
- Article: 58
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Experimental comparison of relative RT-qPCR quantification approaches for gene expression studies in poplar
Authors
- Nicole Regier
- Beat Frey
- Content type: Research article
- Open Access
- Published: 11 August 2010
- Article: 57
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A method for selecting cis-acting regulatory sequences that respond to small molecule effectors
Authors
- Ãœlar Allas
- Tanel Tenson
- Content type: Methodology article
- Open Access
- Published: 10 August 2010
- Article: 56
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Identification of testis-relevant genes using in silico analysis from testis ESTs and cDNA microarray in the black tiger shrimp (Penaeus monodon)
Authors (first, second and last of 7)
- Thidathip Wongsurawat
- Rungnapa Leelatanawit
- Sirawut Klinbunga
- Content type: Research article
- Open Access
- Published: 09 August 2010
- Article: 55