Whole-Transcriptome profiling of formalin-fixed, paraffin-embedded renal cell carcinoma by RNA-seq
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Volume 15, issue 1, December 2014
1186 articles in this issue
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Construction of a high-density genetic map based on large-scale markers developed by specific length amplified fragment sequencing (SLAF-seq) and its application to QTL analysis for isoflavone content in Glycine max
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Deciphering regulatory variation of THI genes in alcoholic fermentation indicate an impact of Thi3p on PDC1 expression
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RNA-seq analysis of broiler liver transcriptome reveals novel responses to high ambient temperature
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Small RNA profiling reveals regulation of Arabidopsis miR168 and heterochromatic siRNA415 in response to fungal elicitors
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Comparative genomics reveals molecular features unique to the songbird lineage
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Adaptive genomic structural variation in the grape powdery mildew pathogen, Erysiphe necator
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Next-generation sequencing of flow-sorted wheat chromosome 5D reveals lineage-specific translocations and widespread gene duplications
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Genes suppressed by DNA methylation in non-small cell lung cancer reveal the epigenetics of epithelial–mesenchymal transition
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Dynamics in the resistant and susceptible peanut (Arachis hypogaea L.) root transcriptome on infection with the Ralstonia solanacearum
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The grapevine gene nomenclature system
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Identification of a lineage specific zinc responsive genomic island in Mycobacterium avium ssp. paratuberculosis
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Genomic characterisation of an endometrial pathogenic Escherichia coli strain reveals the acquisition of genetic elements associated with extra-intestinal pathogenicity
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Transcriptomic analysis of the lesser spotted catshark (Scyliorhinus canicula) pancreas, liver and brain reveals molecular level conservation of vertebrate pancreas function
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Edge effects in calling variants from targeted amplicon sequencing
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In vivo genome-wide analysis of multiple tissues identifies gene regulatory networks, novel functions and downstream regulatory genes for Bapx1 and its co-regulation with Sox9 in the mammalian vertebral column
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Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi
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Comparative genomics of Lactobacillus crispatus suggests novel mechanisms for the competitive exclusion of Gardnerella vaginalis
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Novel and unique domains in aminoacyl-tRNA synthetases from human fungal pathogens Aspergillus niger, Candida albicans and Cryptococcus neoformans
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Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population
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Cross-species toxicogenomic analyses and phenotypic anchoring in response to groundwater low-level pollution
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Unique aspects of fiber degradation by the ruminal ethanologen Ruminococcus albus 7 revealed by physiological and transcriptomic analysis
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Label-free proteomic analysis to confirm the predicted proteome of Corynebacterium pseudotuberculosis under nitrosative stress mediated by nitric oxide
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Analysis of the early heterocyst Cys-proteome in the multicellular cyanobacterium Nostoc punctiforme reveals novel insights into the division of labor within diazotrophic filaments
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Evolutionary and structural annotation of disease-associated mutations in human aminoacyl-tRNA synthetases
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Epigenetic signature of birth weight discordance in adult twins
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RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes
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Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor
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Global phenotypic and genomic comparison of two Saccharomyces cerevisiae wine strains reveals a novel role of the sulfur assimilation pathway in adaptation at low temperature fermentations
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Patterns of gene expression associated with recovery and injury in heat-stressed rats
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Characterization of the porcine nutrient and taste receptor gene repertoire in domestic and wild populations across the globe
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Metabolic and co-expression network-based analyses associated with nitrate response in rice
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Transcriptional response of soybean to thiamethoxam seed treatment in the presence and absence of drought stress
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Early adaptation to oxygen is key to the industrially important traits of Lactococcus lactis ssp. cremoris during milk fermentation
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Cross-species transcriptomic analysis elucidates constitutive aryl hydrocarbon receptor activity
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Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress
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Emiliania huxleyi endures N-limitation with an efficient metabolic budgeting and effective ATP synthesis
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Gene expression profiles responses to aphid feeding in chrysanthemum (Chrysanthemum morifolium)
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Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants
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Genomic selection accuracies within and between environments and small breeding groups in white spruce
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De novo prediction of cis-regulatory elements and modules through integrative analysis of a large number of ChIP datasets
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Development of EST-based SNP and InDel markers and their utilization in tetraploid cotton genetic mapping
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Transcriptome structure variability in Saccharomyces cerevisiae strains determined with a newly developed assembly software
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Gene expression profiling by cDNA-AFLP reveals potential candidate genes for partial resistance of ‘Président Roulin’ against Venturia inaequalis
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Role of chromatin and transcriptional co-regulators in mediating p63-genome interactions in keratinocytes
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Concurrent transcriptional profiling of Dirofilaria immitis and its Wolbachia endosymbiont throughout the nematode life cycle reveals coordinated gene expression
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Transcriptional response of Saccharomyces cerevisiae to potassium starvation
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Identifying structural variation in haploid microbial genomes from short-read resequencing data using breseq
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Non-coding RNA gene families in the genomes of anopheline mosquitoes
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