Volume 6, supplement issue 1, December 2005
Genetic Analysis Workshop 14: Microsatellite and single-nucleotide polymorphism
- Issue editors
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- Joan E Bailey-Wilson
- Laura Almasy
- Mariza de Andrade
- Julia Bailey
- Heike Bickeböller
- Heather J Cordell
- E Warwick Daw
- Lynn Goldin
- Ellen L Goode
- Courtney Gray-McGuire
- Wayne Hening
- Gail Jarvik
- Brion S Maher
- Nancy Mendell
- Andrew D Paterson
- John Rice
- Glen Satten
- Brian Suarez
- Veronica Vieland
- Marsha Wilcox
- Heping Zhang
- Andreas Ziegler
- Jean W MacCluer
162 articles in this issue
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On normality, ethnicity, and missing values in quantitative trait locus mapping
Authors
- Aurélie Labbe
- Hanna Wormald
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S52
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Application of a rank-based genetic association test to age-at-onset data from the Collaborative Study on the Genetics of Alcoholism study
Authors (first, second and last of 4)
- Yi-Ju Li
- Eden R Martin
- Andrew S Allen
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S53
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Critical values and variation in type I error along chromosomes in the COGA dataset using the applied pseudo-trait method
Authors (first, second and last of 5)
- George J Papanicolaou
- Cristina M Justice
- Alexander F Wilson
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S54
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Surrogate phenotype definition for alcohol use disorders: a genome-wide search for linkage and association
Authors (first, second and last of 6)
- Albert Rosenberger
- Nico Janicke
- Heike Bickeböller
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S55
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Application of the regression of offspring on mid-parent method to detect associations between single-nucleotide polymorphisms and the beta 2 electroencephalogram phenotype in the COGA data
Authors
- Marie-Hélène Roy-Gagnon
- Rasika A Mathias
- Alexander F Wilson
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S56
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A comparison of discrete versus continuous environment in a variance components-based linkage analysis of the COGA data
Authors (first, second and last of 6)
- Kevin R Viel
- Diane M Warren
- Laura Almasy
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S57
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A variance component analysis on recombination rate in the COGA pedigrees
Authors
- Lin Wang
- Xin Xu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S58
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Linkage and association analysis in pedigrees from different populations
Authors
- Joseph Beyene
- Jun Yan
- Celia MT Greenwood
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S59
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Locally weighted transmission/disequilibrium test for genetic association analysis
Authors (first, second and last of 7)
- Li Hsu
- Xuesong Yu
- Hua Tang
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S60
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Optimizing the evidence for linkage by permuting marker order
Authors (first, second and last of 4)
- Gyungah Jun
- Yeunjoo Song
- Robert C Elston
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S61
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Comparison of family-based association tests in chromosome regions selected by linkage-based confidence intervals
Authors (first, second and last of 6)
- Juan Pablo Lewinger
- Sophia SF Lee
- Shelley B Bull
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S62
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Fine mapping – 19th century style
Authors
- John Molitor
- Keyan Zhao
- Paul Marjoram
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S63
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Potts model for haplotype associations
Authors
- Elena V Moltchanova
- Janne Pitkäniemi
- Laura Haapala
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S64
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Comparison of genotype- and haplotype-based approaches for fine-mapping of alcohol dependence using COGA data
Authors
- Dushanthi Pinnaduwage
- Laurent Briollais
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S65
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Will the real disease gene please stand up?
Authors (first, second and last of 5)
- Neil Shephard
- Sally John
- Eleftheria Zeggini
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S66
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Fine-mapping using the weighted average method for a case-control study
Authors (first, second and last of 4)
- Kijoung Song
- Mohammed S Orloff
- Robert C Elston
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S67
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Application of family-based association testing to assess the genotype-phenotype association involved in complex traits using single-nucleotide polymorphisms
Authors
- Ming-Hsi Wang
- Mitchell Guo
- Yin Y Shugart
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S68
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Robust testing of haplotype/disease association
Authors
- Andrew S Allen
- Glen A Satten
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S69
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Haplotype-sharing analysis using Mantel statistics for combined genetic effects
Authors (first, second and last of 5)
- Lars Beckmann
- Christine Fischer
- Jenny Chang-Claude
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S70
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A comparison of five methods for selecting tagging single-nucleotide polymorphisms
Authors (first, second and last of 5)
- Kelly M Burkett
- Mercedeh Ghadessi
- Denise Daley
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S71
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Strategies for selecting subsets of single-nucleotide polymorphisms to genotype in association studies
Authors
- Joe M Butler
- D Timothy Bishop
- Jennifer H Barrett
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S72
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Identification of tag single-nucleotide polymorphisms in regions with varying linkage disequilibrium
Authors (first, second and last of 12)
- Priya Duggal
- Elizabeth M Gillanders
- Joan E Bailey-Wilson
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S73
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Fine-scale mapping in case-control samples using locus scoring and haplotype-sharing methods
Authors
- Keith Humphreys
- Mark M Iles
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S74
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Haplotype-sharing analysis for alcohol dependence based on quantitative traits and the Mantel statistic
Authors (first, second and last of 4)
- Andre Kleensang
- Daniel Franke
- Andreas Ziegler
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S75
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Comparisons of methods for linkage analysis and haplotype reconstruction using extended pedigree data
Authors (first, second and last of 7)
- Shili Lin
- Jie Ding
- Yan Xu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S76
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Haplotypic structure of the X chromosome in the COGA population sample and the quality of its reconstruction by extant software packages
Authors (first, second and last of 7)
- Fabio Marroni
- Chiara Toni
- Silvano Presciuttini
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S77
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Comparison of type I error for multiple test corrections in large single-nucleotide polymorphism studies using principal components versus haplotype blocking algorithms
Authors (first, second and last of 5)
- Kristin K Nicodemus
- Wenlei Liu
- M Daniele Fallin
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S78
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Haplotype sharing correlation of alcohol dependence on chromosomes 1–6 in 93 nuclear families
Authors
- Dajun Qian
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S79
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Accuracy of haplotype estimation in a region of low linkage disequilibrium
Authors (first, second and last of 4)
- Christy L Avery
- Lisa J Martin
- Kari E North
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S80
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An exploration of sex-specific linkage disequilibrium on chromosome X in Caucasians from the COGA study
Authors
- Miranda E Cox
- Joel K Campbell
- Carl D Langefeld
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S81
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Bias of allele-sharing linkage statistics in the presence of intermarker linkage disequilibrium
Authors
- Ellen L Goode
- Michael D Badzioch
- Gail P Jarvik
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S82
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Examining the effect of linkage disequilibrium on multipoint linkage analysis
Authors (first, second and last of 4)
- Qiqing Huang
- Sanjay Shete
- Christopher I Amos
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S83
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The efficacy of short tandem repeat polymorphisms versus single-nucleotide polymorphisms for resolving population structure
Authors (first, second and last of 7)
- John SK Kauwe
- Sarah Bertelsen
- Brian K Suarez
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S84
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Evaluation of linkage disequilibrium and its effect on non-parametric multipoint linkage analysis using two high density single-nucleotide polymorphism mapping panels
Authors
- Sarah Shaw Murray
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S85
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Linkage disequilibrium across two different single-nucleotide polymorphism genome scans
Authors (first, second and last of 5)
- Juan Manuel Peralta
- Thomas D Dyer
- Laura Almasy
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S86
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Modeling the effect of a genetic factor for a complex trait in a simulated population
Authors (first, second and last of 6)
- Mathieu Bourgey
- Anne-Louise Leutenegger
- Françoise Clerget-Darpoux
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S87
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Identification of polymorphisms explaining a linkage signal: application to the GAW14 simulated data
Authors
- Ming-Huei Chen
- Paul Van Eerdewegh
- Josée Dupuis
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S88
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A comparison in association and linkage genome-wide scans for alcoholism susceptibility genes using single-nucleotide polymorphisms
Authors
- Yen-Feng Chiu
- Su-Yun Liu
- Ya-Yu Tsai
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S89
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Impact of non-ignorable missingness on genetic tests of linkage and/or association using case-parent trios
Authors
- Chao-Yu Guo
- Jing Cui
- L Adrienne Cupples
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S90
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The quantitative trait linkage disequilibrium test: a more powerful alternative to the quantitative transmission disequilibrium test for use in the absence of population stratification
Authors (first, second and last of 5)
- Lorena M Havill
- Thomas D Dyer
- John Blangero
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S91
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Analysis of binary traits: testing association in the presence of linkage
Authors
- Gudrun Jonasdottir
- Juni Palmgren
- Keith Humphreys
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S92
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Selection of single-nucleotide polymorphisms in disease association data
Authors (first, second and last of 5)
- Jungnam Joo
- Xin Tian
- Nancy L Geller
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S93
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Microsatellite linkage analysis, single-nucleotide polymorphisms, and haplotype associations with ECB21 in the COGA data
Authors
- Aldi T Kraja
- Ingrid B Borecki
- Michael A Province
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S94
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A regression based transmission/disequilibrium test for binary traits: the power of joint tests for linkage and association
Authors
- Emma K Larkin
- Kevin C Cartier
- Courtney Gray-McGuire
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S95
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Comparison of linkage and association strategies for quantitative traits using the COGA dataset
Authors (first, second and last of 8)
- Matthew B McQueen
- Amy Murphy
- Kristel Van Steen
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S96
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Identifying genetic variation affecting a complex trait in simulated data: a comparison of meta-analysis with pooled data analysis
Authors (first, second and last of 4)
- Xiaodong Wu
- Donghui Kan
- Xiaofeng Zhu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S97
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Comparing strategies for association mapping in samples with related individuals
Authors
- Catherine Bourgain
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S98
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Using mixture models to characterize disease-related traits
Authors (first, second and last of 5)
- Tao Duan
- Stephen J Finch
- Nancy R Mendell
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S99
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Linkage disequilibrium mapping via cladistic analysis of phase-unknown genotypes and inferred haplotypes in the Genetic Analysis Workshop 14 simulated data
Authors
- Caroline Durrant
- Andrew P Morris
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S100