Volume 6, supplement issue 1, December 2005
Genetic Analysis Workshop 14: Microsatellite and single-nucleotide polymorphism
- Issue editors
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- Joan E Bailey-Wilson
- Laura Almasy
- Mariza de Andrade
- Julia Bailey
- Heike Bickeböller
- Heather J Cordell
- E Warwick Daw
- Lynn Goldin
- Ellen L Goode
- Courtney Gray-McGuire
- Wayne Hening
- Gail Jarvik
- Brion S Maher
- Nancy Mendell
- Andrew D Paterson
- John Rice
- Glen Satten
- Brian Suarez
- Veronica Vieland
- Marsha Wilcox
- Heping Zhang
- Andreas Ziegler
- Jean W MacCluer
162 articles in this issue
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Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14
Authors (first, second and last of 28)
- Howard J Edenberg
- Laura J Bierut
- Henri Begleiter
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S2
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Construction of the model for the Genetic Analysis Workshop 14 simulated data: genotype-phenotype relationships, gene interaction, linkage, association, disequilibrium, and ascertainment effects for a complex phenotype
Authors (first, second and last of 7)
- David A Greenberg
- Junying Zhang
- Sudhir Marathe
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S3
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Genome scan linkage analysis comparing microsatellites and single-nucleotide polymorphisms markers for two measures of alcoholism in chromosomes 1, 4, and 7
Authors (first, second and last of 6)
- Guanjie Chen
- Adebowale Adeyemo
- Charles Rotimi
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S4
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Comparison of single-nucleotide polymorphisms and microsatellites in detecting quantitative trait loci for alcoholism: The Collaborative Study on the Genetics of Alcoholism
Authors (first, second and last of 4)
- Helen Kim
- Carolyn M Hutter
- Karen L Edwards
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S5
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The effect of linkage disequilibrium on linkage analysis of incomplete pedigrees
Authors
- Douglas F Levinson
- Peter Holmans
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S6
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Comparison of the power between microsatellite and single-nucleotide polymorphism markers for linkage and linkage disequilibrium mapping of an electrophysiological phenotype
Authors
- Hsiu-Fen Lin
- Suh-Hang Hank Juo
- Rong Cheng
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S7
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Genome-wide linkage analysis for alcohol dependence: a comparison between single-nucleotide polymorphism and microsatellite marker assays
Authors (first, second and last of 6)
- Qianli Ma
- Yi Yu
- Marsha A Wilcox
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S8
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Whole-genome association studies of alcoholism with loci linked to schizophrenia susceptibility
Authors
- Junghyun Namkung
- Youngchul Kim
- Taesung Park
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S9
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Linkage analysis of complex diseases using microsatellites and single-nucleotide polymorphisms: application to alcoholism
Authors
- Jérémie Nsengimana
- Hélène Renard
- David Goldgar
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S10
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Comparison of marker types and map assumptions using Markov chain Monte Carlo-based linkage analysis of COGA data
Authors (first, second and last of 9)
- Weiva Sieh
- Saonli Basu
- Ellen M Wijsman
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S11
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Genome-wide linkage analysis of age at onset of alcohol dependence: a comparison between microsatellites and single-nucleotide polymorphisms
Authors (first, second and last of 4)
- Bamidele O Tayo
- Yulan Liang
- Maurizio Trevisan
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S12
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Comparing single-nucleotide polymorphism marker-based and microsatellite marker-based linkage analyses
Authors
- Ayse Ulgen
- Wentian Li
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S13
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Linkage analysis of the GAW14 simulated dataset with microsatellite and single-nucleotide polymorphism markers in large pedigrees
Authors (first, second and last of 6)
- Xiaohong (Rose) Yang
- Kevin Jacobs
- Lynn R Goldin
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S14
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Whole-genome variance components linkage analysis using single-nucleotide polymorphisms versus microsatellites on quantitative traits of derived phenotypes from factor analysis of electroencephalogram waves
Authors (first, second and last of 6)
- Yi Yu
- Yan Meng
- Marsha A Wilcox
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S15
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Which strategy is better for linkage analysis: single-nucleotide polymorphisms or microsatellites? Evaluation by identity-by-state – identity-by-descent transformation affected sib-pair method on GAW14 data
Authors
- Qingqi Yue
- Victor Apprey
- George E Bonney
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S16
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A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures
Authors (first, second and last of 6)
- Chun Zhang
- Simon Cawley
- Giulia C Kennedy
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S17
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Detection of susceptibility loci by genome-wide linkage analysis
Authors (first, second and last of 4)
- Marie-Claude Babron
- Catherine Bourgain
- Françoise Clerget-Darpoux
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S18
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Linkage mapping of a complex trait in the New York population of the GAW14 simulated dataset: a multivariate phenotype approach
Authors (first, second and last of 5)
- Saurabh Ghosh
- Samsiddhi Bhattacharjee
- Partha P Majumder
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S19
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Investigation of altering single-nucleotide polymorphism density on the power to detect trait loci and frequency of false positive in nonparametric linkage analyses of qualitative traits
Authors (first, second and last of 14)
- Alison P Klein
- Ya-Yu Tsai
- Joan E Bailey-Wilson
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S20
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Interval estimation of disease loci: development and applications of new linkage methods
Authors
- Charalampos Papachristou
- Shili Lin
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S21
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Inclusion of unaffected sibs increases power in model-free linkage analysis of a behavioral trait
Authors (first, second and last of 5)
- Sabine Plancoulaine
- Alexandre Alcaïs
- France Gagnon
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S22
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Local false discovery rate and minimum total error rate approaches to identifying interesting chromosomal regions
Authors (first, second and last of 5)
- Ritwik Sinha
- Moumita Sinha
- Yuqun Luo
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S23
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Resampling methods to reduce the selection bias in genetic effect estimation in genome-wide scans
Authors (first, second and last of 5)
- Long Yang Wu
- Sophia SF Lee
- Shelley B Bull
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S24
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Linkage and association analyses of microsatellites and single-nucleotide polymorphisms in nuclear families
Authors
- Jennifer Lin
- Kuang-Yu Liu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S25
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Comparison of single-nucleotide polymorphisms and microsatellites in inference of population structure
Authors (first, second and last of 5)
- Nianjun Liu
- Liang Chen
- Hongyu Zhao
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S26
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A comparison between microsatellite and single-nucleotide polymorphism markers with respect to two measures of information content
Authors (first, second and last of 4)
- Anbupalam Thalamuthu
- Indranil Mukhopadhyay
- Daniel E Weeks
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S27
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Whole-genome linkage analysis in mapping alcoholism genes using single-nucleotide polymorphisms and microsatellites
Authors (first, second and last of 6)
- Shuang Wang
- Song Huang
- Hongyu Zhao
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S28
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Comparison of microsatellites, single-nucleotide polymorphisms (SNPs) and composite markers derived from SNPs in linkage analysis
Authors (first, second and last of 6)
- Chao Xing
- Fredrick R Schumacher
- Robert C Elston
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S29
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A genome-wide scanning and fine mapping study of COGA data
Authors (first, second and last of 6)
- Hsin-Chou Yang
- Chien-Ching Chang
- Cathy SJ Fann
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S30
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Linkage analysis and association analysis in the presence of linkage using age at onset of COGA alcoholism data
Authors
- Xiaoyun Zhong
- Heping Zhang
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S31
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Single-nucleotide polymorphism versus microsatellite markers in a combined linkage and segregation analysis of a quantitative trait
Authors
- E Warwick Daw
- Simon C Heath
- Yue Lu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S32
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Application of the propensity score in a covariate-based linkage analysis of the Collaborative Study on the Genetics of Alcoholism
Authors (first, second and last of 4)
- Betty Q Doan
- Constantine E Frangakis
- Joan E Bailey-Wilson
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S33
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Multipoint identity-by-descent computations for single-point polymorphism and microsatellite maps
Authors (first, second and last of 7)
- Anthony L Hinrichs
- Sarah Bertelsen
- Brian K Suarez
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S34
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Simulation-based homozygosity mapping with the GAW14 COGA dataset on alcoholism
Authors
- Ondrej Libiger
- Nicholas J Schork
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S35
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Linkage analysis of alcohol dependence using both affected and discordant sib pairs
Authors (first, second and last of 6)
- Pei-Ying Shih
- Tao Wang
- Robert C Elston
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S36
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Multilocus and interaction-based genome scan for alcoholism risk factors in Caucasian Americans: the COGA study
Authors
- Adrienne H Williams
- W Mark Brown
- Carl D Langefeld
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S37
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Recursive partitioning models for linkage in COGA data
Authors (first, second and last of 6)
- Wei Xu
- Chelsea Taylor
- Celia MT Greenwood
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S38
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A Bayesian approach for applying Haseman-Elston methods
Authors (first, second and last of 4)
- Seungtai Yoon
- Young Ju Suh
- Kenny Qian Ye
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S39
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Linkage analysis of GAW14 simulated data: comparison of multimarker, multipoint, and conditional approaches
Authors
- Mathew J Barber
- Eleanor Wheeler
- Heather J Cordell
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S40
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Genome-wide linkage and association mapping of disease genes with the GAW14 simulated datasets
Authors
- Kim W Carter
- Pamela A McCaskie
- Lyle J Palmer
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S41
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Identifying genomic regions for fine-mapping using genome scan meta-analysis (GSMA) to identify the minimum regions of maximum significance (MRMS) across populations
Authors (first, second and last of 4)
- Margaret E Cooper
- Toby H Goldstein
- Mary L Marazita
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S42
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An updated meta-analysis approach for genetic linkage
Authors
- Carol J Etzel
- Mei Liu
- Tracy J Costello
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S43
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Calculation of multipoint likelihoods using flanking marker data: a simulation study
Authors (first, second and last of 6)
- Andrew W George
- LaVonne A Mangin
- Veronica J Vieland
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S44
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Covariate linkage analysis of GAW14 simulated data incorporating subclinical phenotype, sex, population, parent-of-origin, and interaction
Authors (first, second and last of 5)
- Marian L Hamshere
- Stuart MacGregor
- Peter A Holmans
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S45
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Modeling the effect of an associated single-nucleotide polymorphism in linkage studies
Authors (first, second and last of 5)
- Jeanine J Houwing-Duistermaat
- Hae-Won Uh
- Li Hsu
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S46
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A gene-model-free method for linkage analysis of a disease-related-trait based on analysis of proband/sibling pairs
Authors (first, second and last of 4)
- Heejong Sung
- Stephen J Finch
- Nancy R Mendell
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S47
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The role of parametric linkage methods in complex trait analyses using microsatellites
Authors
- Michael D Badzioch
- Ellen L Goode
- Gail P Jarvik
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S48
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Including endophenotypes as covariates in variance component heritability and linkage analysis
Authors
- Julia N Bailey
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S49
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Haseman-Elston weighted by marker informativity
Authors (first, second and last of 4)
- Daniel Franke
- André Kleensang
- Andreas Ziegler
- Content type: Proceedings
- Open Access
- Published: 30 December 2005
- Article: S50