Volume 7, supplement issue 1, December 2007
First International Conference on Phylogenomics
- Issue editors
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- Hervé Philippe
- Mathieu Blanchette
16 articles in this issue
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SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics
Authors
- Béatrice Roure
- Naiara Rodriguez-Ezpeleta
- Hervé Philippe
- Content type: Software
- Open Access
- Published: 08 February 2007
- Article: S2
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Inferring angiosperm phylogeny from EST data with widespread gene duplication
Authors
- Michael J Sanderson
- Michelle M McMahon
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S3
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Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model
Authors
- Nicolas Lartillot
- Henner Brinkmann
- Hervé Philippe
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S4
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Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data
Authors (first, second and last of 4)
- Le Bao
- Hong Gu
- Joseph P Bielawski
- Content type: Methodology
- Open Access
- Published: 08 February 2007
- Article: S5
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Rapid divergence of codon usage patterns within the rice genome
Authors
- Huai-Chun Wang
- Donal A Hickey
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S6
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Phylogenetic signal and functional categories in Proteobacteria genomes
Authors
- Iñaki Comas
- Andrés Moya
- Fernando González-Candelas
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S7
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The role of laterally transferred genes in adaptive evolution
Authors
- Pradeep Reddy Marri
- Weilong Hao
- G Brian Golding
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S8
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Detecting non-coding selective pressure in coding regions
Authors
- Hui Chen
- Mathieu Blanchette
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S9
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Identifying dramatic selection shifts in phylogenetic trees
Authors
- Karin S Dorman
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S10
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Long-wavelength sensitive visual pigments of the guppy (Poecilia reticulata): six opsins expressed in a single individual
Authors
- Cameron J Weadick
- Belinda SW Chang
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S11
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FlowerPower: clustering proteins into domain architecture classes for phylogenomic inference of protein function
Authors
- Nandini Krishnamurthy
- Duncan Brown
- Kimmen Sjölander
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S12
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RNase MRP and the RNA processing cascade in the eukaryotic ancestor
Authors (first, second and last of 4)
- Michael D Woodhams
- Peter F Stadler
- Lesley J Collins
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S13
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Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human
Authors
- Zhaolei Zhang
- Andy Wing Chun Pang
- Mark Gerstein
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S14
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Evolution of motif variants and positional bias of the cyclic-AMP response element
Authors (first, second and last of 6)
- Brandon Smith
- Hung Fang
- Marianna Sikorska
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S15
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Assembly rules for protein networks derived from phylogenetic-statistical analysis of whole genomes
Authors
- Mark Pagel
- Andrew Meade
- Daniel Scott
- Content type: Research
- Open Access
- Published: 08 February 2007
- Article: S16