Volume 55, issue 1, December 2023
95 articles in this issue
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Genetic markers associated with bone composition in Rhode Island Red laying hens
Authors (first, second and last of 11)
- Moh Sallam
- Peter W. Wilson
- Martin Johnsson
- Content type: Research Article
- Open Access
- Published: 29 June 2023
- Article: 44
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Genetic dissection of 26 meat cut, meat quality and carcass traits in four pig populations
Authors (first, second and last of 10)
- Lei Xie
- Jiangtao Qin
- Lusheng Huang
- Content type: Research Article
- Open Access
- Published: 29 June 2023
- Article: 43
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A genome-wide association study for loin depth and muscle pH in pigs from intensely selected purebred lines
Authors (first, second and last of 10)
- Suzanne Desire
- Martin Johnsson
- Melissa K. Jungnickel
- Content type: Research Article
- Open Access
- Published: 15 June 2023
- Article: 42
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Integration of beef cattle international pedigree and genomic estimated breeding values into national evaluations, with an application to the Italian Limousin population
Authors (first, second and last of 8)
- Renzo Bonifazi
- Mario P. L. Calus
- Jérémie Vandenplas
- Content type: Research Article
- Open Access
- Published: 12 June 2023
- Article: 41
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Integrin alpha 6 homozygous splice-site mutation causes a new form of junctional epidermolysis bullosa in Charolais cattle
Authors (first, second and last of 15)
- Mekki Boussaha
- Arnaud Boulling
- Aurélien Capitan
- Content type: Short communication
- Open Access
- Published: 12 June 2023
- Article: 40
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Genetic architecture of acute hyperthermia resistance in juvenile rainbow trout (Oncorhynchus mykiss) and genetic correlations with production traits
Authors (first, second and last of 13)
- Henri Lagarde
- Delphine Lallias
- Florence Phocas
- Content type: Research Article
- Open Access
- Published: 12 June 2023
- Article: 39
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How economic weights translate into genetic and phenotypic progress, and vice versa
Authors (first, second and last of 6)
- Henner Simianer
- Johannes Heise
- Christian Reimer
- Content type: Research Article
- Open Access
- Published: 08 June 2023
- Article: 38
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Efficient large-scale single-step evaluations and indirect genomic prediction of genotyped selection candidates
Authors (first, second and last of 9)
- Jeremie Vandenplas
- Jan ten Napel
- Ismo Strandén
- Content type: Research Article
- Open Access
- Published: 08 June 2023
- Article: 37
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A method for partitioning trends in genetic mean and variance to understand breeding practices
Authors (first, second and last of 5)
- Thiago P. Oliveira
- Jana Obšteter
- Gregor Gorjanc
- Content type: Research Article
- Open Access
- Published: 02 June 2023
- Article: 36
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Genetic analysis of protein efficiency and its association with performance and meat quality traits under a protein-restricted diet
Authors
- Esther Oluwada Ewaoluwagbemiga
- Giuseppe Bee
- Claudia Kasper
- Content type: Research Article
- Open Access
- Published: 02 June 2023
- Article: 35
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A breed-of-origin of alleles model that includes crossbred data improves predictive ability for crossbred animals in a multi-breed population
Authors (first, second and last of 5)
- Ana Guillenea
- Mogens Sandø Lund
- Emre Karaman
- Content type: Research Article
- Open Access
- Published: 15 May 2023
- Article: 34
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The size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattle
Authors
- Audald Lloret-Villas
- Hubert Pausch
- Alexander S. Leonard
- Content type: Research Article
- Open Access
- Published: 11 May 2023
- Article: 33
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Characterization of the genetic pool of the Canadienne dairy cattle breed
Authors (first, second and last of 5)
- Alexandra Carrier
- Isabelle Gilbert
- Claude Robert
- Content type: Research Article
- Open Access
- Published: 09 May 2023
- Article: 32
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SIMplyBee: an R package to simulate honeybee populations and breeding programs
Authors (first, second and last of 5)
- Jana Obšteter
- Laura K. Strachan
- Gregor Gorjanc
- Content type: Software
- Open Access
- Published: 09 May 2023
- Article: 31
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Whole‐genome sequencing identifies interferon-induced protein IFI6/IFI27-like as a strong candidate gene for VNN resistance in European sea bass
Authors (first, second and last of 18)
- Emilie Delpuech
- Marc Vandeputte
- François Allal
- Content type: Research Article
- Open Access
- Published: 04 May 2023
- Article: 30
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On the holobiont ‘predictome’ of immunocompetence in pigs
Authors (first, second and last of 6)
- Joan Calle-García
- Yuliaxis Ramayo-Caldas
- Miguel Pérez-Enciso
- Content type: Research Article
- Open Access
- Published: 01 May 2023
- Article: 29
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Reintroducing genetic diversity in populations from cryopreserved material: the case of Abondance, a French local dairy cattle breed
Authors (first, second and last of 6)
- Alicia Jacques
- Grégoire Leroy
- Gwendal Restoux
- Content type: Research Article
- Open Access
- Published: 19 April 2023
- Article: 28
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Variation in the proportion of the segregating genome shared between full-sibling cattle and sheep
Authors (first, second and last of 4)
- David Kenny
- Donagh P. Berry
- Pierce Rafter
- Content type: Short communication
- Open Access
- Published: 18 April 2023
- Article: 27
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Correction: Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP
Authors (first, second and last of 6)
- Andre Garcia
- Ignacio Aguilar
- Daniela Lourenco
- Content type: Correction
- Open Access
- Published: 17 April 2023
- Article: 26
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Correction: In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants
Authors (first, second and last of 11)
- Tuan V. Nguyen
- Christy J. Vander Jagt
- Iona M. MacLeod
- Content type: Correction
- Open Access
- Published: 11 April 2023
- Article: 25
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A comprehensive analysis of the genetic diversity and environmental adaptability in worldwide Merino and Merino-derived sheep breeds
Authors (first, second and last of 42)
- Simone Ceccobelli
- Vincenzo Landi
- Fabio Pilla
- Content type: Research Article
- Open Access
- Published: 03 April 2023
- Article: 24
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Integrating on-farm and genomic information improves the predictive ability of milk infrared prediction of blood indicators of metabolic disorders in dairy cows
Authors (first, second and last of 6)
- Lucio F. M. Mota
- Diana Giannuzzi
- Alessio Cecchinato
- Content type: Research Article
- Open Access
- Published: 03 April 2023
- Article: 23
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Viral nervous necrosis resistance in gilthead sea bream (Sparus aurata) at the larval stage: heritability and accuracy of genomic prediction with different training and testing settings
Authors (first, second and last of 10)
- Sara Faggion
- Paolo Carnier
- Luca Bargelloni
- Content type: Research Article
- Open Access
- Published: 03 April 2023
- Article: 22
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Genomic prediction in pigs using data from a commercial crossbred population: insights from the Duroc x (Landrace x Yorkshire) three-way crossbreeding system
Authors (first, second and last of 6)
- Siyi Liu
- Tianxiong Yao
- Zhiyan Zhang
- Content type: Research Article
- Open Access
- Published: 28 March 2023
- Article: 21
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Genome-wide mapping of signatures of selection using a high-density array identified candidate genes for growth traits and local adaptation in chickens
Authors (first, second and last of 8)
- Salvatore Mastrangelo
- Slim Ben-Jemaa
- Martino Cassandro
- Content type: Research Article
- Open Access
- Published: 23 March 2023
- Article: 20
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Validation with single-step SNPBLUP shows that evaluations can continue using a single mean of genotyped individuals, even with multiple breeds
Authors (first, second and last of 6)
- Michael Aldridge
- Jeremie Vandenplas
- Mario Calus
- Content type: Research Article
- Open Access
- Published: 22 March 2023
- Article: 19
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A web tool for the global identification of pig breeds
Authors (first, second and last of 7)
- Jian Miao
- Zitao Chen
- Yuchun Pan
- Content type: Research Article
- Open Access
- Published: 21 March 2023
- Article: 18
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Genomic evaluation for two-way crossbred performance in cattle
Authors (first, second and last of 5)
- Quanshun Mei
- Huiming Liu
- Ole F Christensen
- Content type: Research Article
- Open Access
- Published: 17 March 2023
- Article: 17
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Single-step genome-wide association analyses of claw horn lesions in Holstein cattle using linear and threshold models
Authors (first, second and last of 12)
- Bingjie Li
- Matthew Barden
- Georgios Banos
- Content type: Research Article
- Open Access
- Published: 10 March 2023
- Article: 16
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Effect of environmental variance-based resilience selection on the gut metabolome of rabbits
Authors (first, second and last of 5)
- Cristina Casto-Rebollo
- María José Argente
- Noelia Ibáñez-Escriche
- Content type: Research Article
- Open Access
- Published: 09 March 2023
- Article: 15
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Selective genotyping strategies for a sib test scheme of a broiler breeder program
Authors (first, second and last of 5)
- Charlie A. de Hollander
- Vivian P. Breen
- Mario PL. Calus
- Content type: Research Article
- Open Access
- Published: 07 March 2023
- Article: 14
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Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines
Authors (first, second and last of 8)
- Simon Boitard
- Laurence Liaubet
- Marie-José Mercat
- Content type: Research Article
- Open Access
- Published: 02 March 2023
- Article: 13
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Adjusted fence height: an improved phenotype for the genetic evaluation of show jumping performance in Warmblood horses
Authors (first, second and last of 6)
- Léa Chapard
- Anna Van Thillo
- Steven Janssens
- Content type: Research Article
- Open Access
- Published: 23 February 2023
- Article: 12
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Genomic selection models substantially improve the accuracy of genetic merit predictions for fillet yield and body weight in rainbow trout using a multi-trait model and multi-generation progeny testing
Authors (first, second and last of 6)
- Andre Garcia
- Shogo Tsuruta
- Tim Leeds
- Content type: Research Article
- Open Access
- Published: 09 February 2023
- Article: 11
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Selection index theory for populations under directional and stabilizing selection
Authors
- Robin Wellmann
- Content type: Research Article
- Open Access
- Published: 03 February 2023
- Article: 10
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In it for the long run: perspectives on exploiting long-read sequencing in livestock for population scale studies of structural variants
Authors (first, second and last of 11)
- Tuan V. Nguyen
- Christy J. Vander Jagt
- Iona M. MacLeod
- Content type: Review
- Open Access
- Published: 31 January 2023
- Article: 9
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Nest preference and laying duration traits to select against floor eggs in laying hens
Authors (first, second and last of 5)
- Lorry Bécot
- Nicolas Bédère
- Pascale Le Roy
- Content type: Research Article
- Open Access
- Published: 25 January 2023
- Article: 8
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Reducing computational demands of restricted maximum likelihood estimation with genomic relationship matrices
Authors
- Karin Meyer
- Content type: Short communication
- Open Access
- Published: 25 January 2023
- Article: 7
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Reliabilities of estimated breeding values in models with metafounders
Authors (first, second and last of 5)
- Matias Bermann
- Ignacio Aguilar
- Andres Legarra
- Content type: Research Article
- Open Access
- Published: 23 January 2023
- Article: 6
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Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry
Authors (first, second and last of 5)
- Zhou Wu
- Mirte Bosse
- Richard P. M. A. Crooijmans
- Content type: Research Article
- Open Access
- Published: 20 January 2023
- Article: 5
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Estimation of genotype by temperature-humidity index interactions on milk production and udder health traits in Montbeliarde cows
Authors (first, second and last of 6)
- Aurélie Vinet
- Sophie Mattalia
- Didier Boichard
- Content type: Research Article
- Open Access
- Published: 19 January 2023
- Article: 4
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Unraveling the phenotypic and genomic background of behavioral plasticity and temperament in North American Angus cattle
Authors (first, second and last of 7)
- Amanda B. Alvarenga
- Hinayah R. Oliveira
- Luiz F. Brito
- Content type: Research Article
- Open Access
- Published: 19 January 2023
- Article: 3
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Predicting the impact of genotype-by-genotype interaction on the purebred–crossbred genetic correlation from phenotype and genotype marker data of parental lines
Authors (first, second and last of 6)
- Pascal Duenk
- Yvonne C. J. Wientjes
- Mario P. L. Calus
- Content type: Research Article
- Open Access
- Published: 13 January 2023
- Article: 2
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A computationally efficient method for approximating reliabilities in large-scale single-step genomic prediction
Authors (first, second and last of 7)
- Hongding Gao
- Andrei A. Kudinov
- Ismo Strandén
- Content type: Research Article
- Open Access
- Published: 05 January 2023
- Article: 1