1. Introduction to Special Issue “Methods for Analysis of Graphs and Networks and Their Applications in Biosciences”

   • Hongzhe Li

   OriginalPaper 22 March 2012 Pages: 1 - 2

2. An Efficient Optimization Algorithm for Structured Sparse CCA, with Applications to eQTL Mapping

   • Xi Chen
   • Han Liu

   OriginalPaper 21 December 2011 Pages: 3 - 26

3. A Two-Step Penalized Regression Method with Networked Predictors

   • Chong Luo
   • Wei Pan
   • Xiaotong Shen

   OriginalPaper 04 January 2012 Pages: 27 - 46

4. Network Based Prediction Model for Genomics Data Analysis

   • Ying Huang
   • Pei Wang

   OriginalPaper 09 February 2012 Pages: 47 - 65

   

5. Adaptive Thresholding for Reconstructing Regulatory Networks from Time-Course Gene Expression Data

   • Ali Shojaie
   • Sumanta Basu
   • George Michailidis

   OriginalPaper 22 December 2011 Pages: 66 - 83

6. A Latent Eigenprobit Model with Link Uncertainty for Prediction of Protein–Protein Interactions

   • Xiaoyu Jiang
   • Eric D. Kolaczyk

   OriginalPaper 20 December 2011 Pages: 84 - 104

7. A Bayesian Approach to Pathway Analysis by Integrating Gene–Gene Functional Directions and Microarray Data

   • Yifang Zhao
   • Ming-Hui Chen
   • Lynn Kuo

   OriginalPaper 29 December 2011 Pages: 105 - 131

8. New Approaches to Principal Component Analysis for Trees

   • Burcu Aydın
   • Gábor Pataki
   • J. S. Marron

   OriginalPaper 08 February 2012 Pages: 132 - 156

   

9. Frequent Pattern Discovery in Multiple Biological Networks: Patterns and Algorithms

   • Wenyuan Li
   • Haiyan Hu
   • Xianghong Jasmine Zhou

   OriginalPaper Open access 29 December 2011 Pages: 157 - 176

10. Surveying Hard-to-Reach Groups Through Sampled Respondents in a Social Network

    • Tyler H. McCormick
    • Ran He
    • Tian Zheng

    OriginalPaper 04 April 2012 Pages: 177 - 195