Volume 81, Issue 8, August 2019
Special Issue: Gillespie and his Algorithms and Special Issue: Multiscale Modelling of Tissue Growth and Shape
Issue Editors:
In this issue (24 articles)
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Special Issue: Gillespie and His Algorithms
Generalizing Gillespie’s Direct Method to Enable Network-Free Simulations
Pages 2822-2848 -
Special Issue: Gillespie and his Algorithms
Stochastic Dynamics of Eukaryotic Flagellar Growth
Pages 2849-2872 -
Special Issue: Gillespie and His Algorithms
The Linear Noise Approximation for Spatially Dependent Biochemical Networks
Pages 2873-2901 -
Special Issue: Gillespie and his Algorithms
Low Variance Couplings for Stochastic Models of Intracellular Processes with Time-Dependent Rate Functions
Pages 2902-2930 -
Special Issue: Gillespie and his Algorithms
Quasi-Monte Carlo Methods Applied to Tau-Leaping in Stochastic Biological Systems
Pages 2931-2959 -
Special Issue: Gillespie and his Algorithms
Spatial Stochastic Intracellular Kinetics: A Review of Modelling Approaches
Pages 2960-3009 -
Special Issue: Gillespie and His Algorithms
Stochastic Simulation of Pattern Formation in Growing Tissue: A Multilevel Approach
Pages 3010-3023 -
Special Issue: Gillespie and His Algorithms
Accuracy Analysis of Hybrid Stochastic Simulation Algorithm on Linear Chain Reaction Systems
Pages 3024-3052 -
Special Issue: Gillespie and His Algorithms
A Critical Comparison of Rejection-Based Algorithms for Simulation of Large Biochemical Reaction Networks
Pages 3053-3073 -
Special Issue: Gillespie and His Algorithms
S-Leaping: An Adaptive, Accelerated Stochastic Simulation Algorithm, Bridging \(\tau \) -Leaping and R-Leaping
Pages 3074-3096 -
Special Issue: Gillespie and His Algorithms
Data-Driven Method for Efficient Characterization of Rare Event Probabilities in Biochemical Systems
Pages 3097-3120 -
Special Issue: Gillespie and His Algorithms
Sensitivity Analysis for Multiscale Stochastic Reaction Networks Using Hybrid Approximations
Pages 3121-3158 -
Special Issue: Gillespie and His Algorithms
Exact Variance-Reduced Simulation of Lattice Continuous-Time Markov Chains with Applications in Reaction Networks
Pages 3159-3184 -
Special Issue: Gillespie and His Algorithms
Multiscale Stochastic Reaction–Diffusion Algorithms Combining Markov Chain Models with Stochastic Partial Differential Equations
Pages 3185-3213 -
Special Issue: Multiscale Modeling of Tissue Growth and Shape
Are Homeostatic States Stable? Dynamical Stability in Morphoelasticity
Pages 3219-3244 -
Special Issue: Multi-scale Modeling of Tissue Growth and Shape
Cell-Based Model of the Generation and Maintenance of the Shape and Structure of the Multilayered Shoot Apical Meristem of Arabidopsis thaliana
Pages 3245-3281 -
Special Issue: Multiscale Modeling of Tissue Growth and Shape
A Diffuse Interface Framework for Modeling the Evolution of Multi-cell Aggregates as a Soft Packing Problem Driven by the Growth and Division of Cells
Pages 3282-3300 -
Special Issue: Multi-scale Modeling of Tissue Growth and Shape
Interplay Between the Persistent Random Walk and the Contact Inhibition of Locomotion Leads to Collective Cell Behaviors
Pages 3301-3321
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