Abstract
A wide use of indexing algorithms for bio-medical images is done by the researchers. This paper proposes a novel feature based algorithm for indexing in brain tumor MR images which helps to compare and analyze the extent of disease amongst a database. After the detection of cancer by using various filters and operations, we use features like centroid, length of the parameter, number of connected components and Laplacian of Gaussian for indexing. This enables us to extract similar images in the database as well as to analyze the impact of disease in the unknown sample.
Similar content being viewed by others
References
Polakowski WE, Cournoyer DA, Rogers SK, DeSimio MP, Ruck DW, Hoffmeister JW, Raines RA (1997) Computer-aided breast cancer detection and diagnosis of masses using difference of Gaussians and derivative-based feature saliency. IEEE Trans Med Imaging 16(6):811–819
Xu Y, Zhu JY, Chang E, Tu Z (2012) Multiple clustered instance learning for histopathology cancer image classification, segmentation and clustering. In: Computer vision and pattern recognition (CVPR), 2012 IEEE conference. IEEE, pp 964–971
Ojala T, Pietikäinen M, Harwood D (1996) A comparative study of texture measures with classification based on featured distributions. Pattern Recognit 29(1):51–59
Tan X, Triggs B (2010) Enhanced local texture feature sets for face recognition under difficult lighting conditions. IEEE Trans Image Process 19(6):1635–1650
Guo Z, Zhang L, Zhang D (2010) Rotation invariant texture classification using LBP variance (LBPV) with global matching. Pattern Recognit 43(3):706–719
Murala S, Wu QJ (2014) MRI and CT image indexing and retrieval using local mesh peak valley edge patterns. Signal Process Image Commun 29(3):400–409
Vipparthi SK, Murala S, Gonde AB, Wu QJ (2016) Local directional mask maximum edge patterns for image retrieval and face recognition. IET Comput Vis 10(3):182–192
Vipparthi SK, Murala S, Nagar SK, Gonde AB (2015) Local Gabor maximum edge position octal patterns for image retrieval. Neurocomputing 167:336–345
Scott G, Shyu CR (2007) Knowledge-driven multidimensional indexing structure for biomedical media database retrieval. IEEE Trans Inf Technol Biomed 11(3):320–331
Akakin HC, Gurcan MN (2012) Content-based microscopic image retrieval system for multi-image queries. IEEE Trans Inf Technol Biomed 16(4):758–769
Quddus A, Basir O (2012) Semantic image retrieval in magnetic resonance brain volumes. IEEE Trans Inf Technol Biomed 16(3):348–355
Unay D, Ekin A, Jasinschi R (2008) Medical image search and retrieval using local binary patterns and KLT feature points. In: 2008 15th IEEE international conference on image processing. IEEE, pp 997–1000
Murala S, Wu QJ (2014) Local mesh patterns versus local binary patterns: biomedical image indexing and retrieval. IEEE J Biomed Health Inform 18(3):929–938
Vipparthi SK, Nagar SK (2015) Directional local ternary patterns for multimedia image indexing and retrieval. Int J Signal Imaging Syst Eng 8(3):137–145
Do MN, Vetterli M (2002) Wavelet-based texture retrieval using generalized Gaussian density and Kullback–Leibler distance. IEEE Trans Image Process 11(2):146–158
Gibbs P, Turnbull LW (2003) Textural analysis of contrast-enhanced MR images of the breast. Magn Reson Med 50(1):92–98
Rao LK, Rao DV (2015) Local quantized extrema patterns for content-based natural and texture image retrieval. Hum Centric Comput Inf Sci 5(1):1
Deep G, Kaur L, Gupta S (2016) Directional local ternary quantized extrema pattern: a new descriptor for biomedical image indexing and retrieval. Eng Sci Technol 19:1895–1909
Deep G, Kaur L, Gupta S (2016) Biomedical image indexing and retrieval descriptors: a comparative study. Proc Comput Sci 85:954–961
Nakayama R, Abe H, Shiraishi J, Doi K (2011) Evaluation of objective similarity measures for selecting similar images of mammographic lesions. J Digit Imaging 24(1):75–85
Antani S, Long LR, Thoma GR (2004) Content-based image retrieval for large biomedical image archives. In: Proceedings of 11th world congress on medical informatics (MEDINFO), pp 7–11
Kasturi R, Jain R (2002) A survey on the use of pattern recognition methods for abstraction, indexing and retrieval of images and video. Pattern Recognit 35(4):945–965
Tutac AE, Racoceanu D, Putti T, Xiong W, Leow WK, Cretu V (2008) Knowledge-guided semantic indexing of breast cancer histopathology images. In: 2008 international conference on biomedical engineering and informatics, vol 2. IEEE, pp 107–112
Dimitrovski I, Kocev D, Kitanovski I, Loskovska S, Džeroski S (2015) Improved medical image modality classification using a combination of visual and textual features. Comput Med Imaging Graph 39:14–26
Wang F (2015) Adaptive semi-supervised recursive tree partitioning: the ART towards large scale patient indexing in personalized healthcare. J Biomed Inform 55:41–54
Manjunath KN, Renuka A, Niranjan UC (2007) Linear models of cumulative distribution function for content-based medical image retrieval. J Med Syst 31(6):433–443
Rahman MM, Antani SK, Thoma GR (2011) A learning-based similarity fusion and filtering approach for biomedical image retrieval using SVM classification and relevance feedback. IEEE Trans Inf Technol Biomed 15(4):640–646
Müller H, Kalpathy-Cramer J, Eggel I, Bedrick S, Radhouani S, Bakke B, Hersh W et al (2009) Overview of the CLEF 2009 medical image retrieval track. In: Workshop of the cross-language evaluation forum for European languages. Springer, Berlin, pp 72–84
Panda A, Mishra TK, Phaniharam VG (2019) Automated brain tumor detection using discriminative clustering based MRI segmentation. In: Smart innovations in communication and computational sciences. Springer, Singapore, pp 117–126
Srivastava V, Purwar RK, Jain A (2019) A dynamic threshold-based local mesh ternary pattern technique for biomedical image retrieval. Int J Imaging Syst Technol 29(2):168–179
Srivastava V, Purwar RK (2019) Classification of CT scan images of lungs using deep convolutional neural network with external shape-based features. J Digit Imaging. https://doi.org/10.1007/s10278-019-00245
Mohsen H, El-Dahshan ESA, El-Horbaty ESM, Salem ABM (2018) Classification using deep learning neural networks for brain tumors. Future Comput Inform J 3(1):68–71
Mallick PK, Ryu SH, Satapathy SK, Mishra S, Nguyen GN, Tiwari P (2019) Brain MRI image classification for cancer detection using deep wavelet autoencoder-based deep neural network. IEEE Access 7:46278–46287
Heikkilä M, Pietikäinen M, Schmid C (2009) Description of interest regions with local binary patterns. Pattern Recognit 42(3):425–436
Becker M, Bleser G, Pagani A, Stricker D, Wuest H (2007) An architecture for prototyping and application development of visual tracking systems. In: 2007 3DTV conference. IEEE, pp 1–4
Velmurugan K, Santhosh Baboo S (2011) Content-based image retrieval using SURF and colour moments. Glob J Comput Sci Tech
Carson C, Belongie S, Greenspan H, Malik J (2002) Blobworld: image segmentation using expectation-maximization and its application to image querying. IEEE Trans Pattern Anal Mach Intell 24(8):1026–1038
Acknowledgements
We extend our gratitude to authorities of Deen Dayal Upadhyay Hospital, New Delhi for their help and support by providing live MR images for different patients suffering from this deadly disease. Also we would like to thank Visveswaraya Ph.D. Fellowship for their support throughout the research.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Purwar, R.K., Srivastava, V. A novel feature based indexing algorithm for brain tumor MR-images. Int. j. inf. tecnol. 12, 1005–1011 (2020). https://doi.org/10.1007/s41870-019-00412-9
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s41870-019-00412-9