Abstract
Potato yellow mosaic virus (PYMV) is one of the most important begomoviruses infecting tomatoes in the Caribbean basin. Viruses of this group are transmitted by whiteflies of the Bemisia tabaci cryptic species complex. Within this complex, the whitefly referred to as Middle East-Asia Minor 1 (MEAM1) is globally spread and recognised as a highly efficient begomovirus vector. This study reports the whole genome of a PYMV isolate infecting tomatoes in Táchira state, Venezuela. The DNA-A of this isolate shared the highest nucleotide identity (93.5%) with a PYMV isolate from Solanum americanum. The PYMV isolate described here revealed a putative recombination event involving PYMV and tomato chlorotic leaf distortion virus. Additionally, the PYMV transmission by the whitefly MEAM1 was evaluated. At 60 days post inoculation, the transmission efficiency was 83.6, 88.2 and 100% when using one, five and 20 adults per plants, respectively.
References
Brown JK, Zerbini FM, Navas-Castillo J, Moriones E, Ramos-Sobrinho R, Silva JCF, Fiallo-Olivé E, Briddon RW (2015) Revision of Begomovirus taxonomy base on pairwise sequence comparisons. Arch Virol 160:1593–1619
Chirinos DT, Geraud-Pouey F, Romay G, Güerere P, Franco MA, Galindo-Castro I (2012) Evaluación de genotipos comerciales de tomate por su resistencia a Begomovirus. Interciencia 37:451–456
Chirinos DT, Geraud-Pouey F, Romay G, Fernandez C, Bastidas L, Flores L, Güerere P (2014) Infección en begomovirus en plantas de tomate propagandas bajo diferentes condiciones de protección física de semilleros. Bioagro 26:57–62
Cohen S, Duffus JE, Larsen RC, Liu HY, Flock RA (1983) Purification, serology, and vector relationships of Squash leaf curl virus, a whitefly-transmitted geminivirus. Phytopathology 73:1669–1673
Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797
Geraud-Pouey F, Chirinos DT, Galindo-Castro I, Franco MA, Santana MA, Gillis A, Romay G (2016) Occurrence of six begomoviruses infecting tomato fields in Venezuela and genetic characterization of Potato yellow mosaic virus isolates. J Phytopathol 164:697–703
Geraud-Pouey F, Chirinos DT, Romay G, Santana MA, Bastidas L, Flores L (2009) Transmisión del TYLCV a diferentes materiales de tomate (Lycopersicon esculentum Miller) mediado por el Biotipo B del complejo Bemisia tabaci (Gennadius) en Venezuela. Bioagro 21:21–33
Gilbertson RL, Rojas MR, Russell DR, Maxwell DP (1991) Use of the asymmetric polymerase chain reaction and DNA sequencing to determine genetic variability of bean golden mosaic geminivirus in the Dominican Republic. J Gen Virol 72:2843–2848
Güerere P, Chirinos DT, Geraud-Pouey F, Moriones E, Santana MA, Franco MA, Galindo-Castro I, Romay G (2012) Experimental transmission of the mild strain of Tomato yellow leaf curl virus (TYLCV) to Amaranthus dubius by Bemisia tabaci (Hemiptera:Aleyrodidae). Phytoparasitica 40:369–373
Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018) MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Molecular Biology Evolution 35:1547–1549
Lefeuvre P, Lett JM, Reynaud B, Martin DP (2007) Avoidance of protein fold disruption in natural virus recombinants. PLoS Pathogen 3:e181
Martin D, Murrell B, Golden M, Khoosa A, Muhire B (2015) RDP4: Detection and analysis of recombination patterns in virus genomes. Virus Evolution 1:vev003
Muhire BM, Varsani A, Martin DP (2014) SDT: a virus classification tool based on pairwise sequence alignment and identity calculation. PLoS One 9:e108277
Nava AR, Patte CP, Hiebert E, Polston JE (2006) Detection and variability of Begomoviruses in tomato from the Andean States of Venezuela. Plant Dis 90:61–66
Roberts EJF, Buck KW, Coutts RHA (1986) A new geminivirus infecting potatoes in Venezuela. Plant Dis 70:603
Rojas MA, Gilbertson RL, Russell DR, Maxwell DP (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminiviruses. Plant Dis 77:340–347
Rojas MR, Macedo MA, Maliano MR, Soto-Aguilar M, Souza JO, Briddon RW, Kenyon L, Bustamante RFR, Zerbini FM, Adkins S, Legg JP, Kvarnheden A, Wintermantel WM, Sudarshana MR, Peterschmitt M, Lapidot M, Martin DP, Moriones E, Inoue-Nagata AK, Gilbertson RL (2018) World management of geminiviruses. Annual Review of Phytopathology 56:637–677
Romay G, Chirinos DT, Geraud-Pouey F, Torres M, Bragard C (2016) First report of Potato yellow mosaic virus infecting Solanum americanum in Venezuela. New Disease Reports 34:20
Romay G, Geraud-Pouey F, Chirinos DT, Morales F, Herrera E, Fernández C, Martínez AK (2010) Transmisión del Tomato Venezuela Virus por Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae), en Maracaibo, Venezuela. Neotropical Entomology 39:266–274
Romay G, Geraud-Pouey F, Chirinos DT, Santana MA, Galindo-Castro I, Márquez LM (2011) Microsatellites reveal widespread predominance of an invasive over an indigenous Bemisia tabaci (Gennadius) in Venezuela. Phytoparasitica 39:419–428
Urbino C, Polston JE, Patte CP, Caruana M (2004) Characterization and genetic diversity of Potato yellow mosaic virus from the Caribbean. Arch Virol 149:417–424
Zambrano K, Geraud-Pouey F, Chirinos D, Romay G, Marys E (2011) Tomato chlorotic leaf distortion virus, a new bipartite begomovirus infecting Solanum lycopersicum. and Capsicum chinense in Venezuela. Arch Virol 56:2263–22636
Zerbini FM, Briddon RW, Idris A, Martin DP, Moriones E, Navas-Castillo J, Rivera-Bustamante R, Roumagnac P, Varsani A, ICTV Report Consortium (2017) ICTV Virus Taxonomy Profile: Geminiviridae. J Gen Virol 98:131–133
Acknowledgments
This work was partly funded by the Venezuelan Ministry of Higher Education, Science and Technology award number FONACIT-G-2000001610. G.R was the recipient of a Move-In Louvain fellowship from the UCLouvain.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest.
The authors declare no conflict of interest.
Ethical approval.
This article does not contain any studies with human participants or animals performed by any of the authors.
Additional information
Section Editor: Juliana Freitas-Astua
Rights and permissions
About this article
Cite this article
Chirinos, D.T., Geraud-Pouey, F., Fernandez, C.E. et al. Genomic characterization and transmission efficiency by its vector Bemisia tabaci of a novel recombinant strain of potato yellow mosaic virus. Trop. plant pathol. 45, 91–95 (2020). https://doi.org/10.1007/s40858-019-00316-w
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s40858-019-00316-w