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Limtongia gen. nov. for Zygozyma smithiae (Lipomycetaceae)

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Abstract

Teleomorphic species of the genus Zygozyma and anamorphic species of the genus Myxozyma were examined phylogenetically. In phylogenetic trees based on 18S rRNA-, 26S rRNA-, mitochondrial small subunit rRNA- and EF-1α-gene sequences and concatenated sequences of the latter four regions, derived from the neighbor-joining method, the four species of the genus Zygozyma constituted four clusters, respectively, with low bootstrap values, indicating that all four species can be distinguished from one another at the generic level. The name of Limtongia was newly suggested for Zygozyma smithiae, and Limtongia smithiae was proposed as new combination.

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References

  • Billon-Grand G (1989) A new ascosporogenous yeast genus: Yamadazyma gen. nov. Mycotaxon 35:201–204

    Google Scholar 

  • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791

    Article  Google Scholar 

  • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120

    Article  PubMed  CAS  Google Scholar 

  • Kock JLF, van der Walt JP, Yamada Y (1995) Smithiozyma gen. nov. (Lipomycetceae). S Afr J Bot 61:232–233

    Google Scholar 

  • Kurtzman CP (1984) Synonymy of the yeast genera Hansenula and Pichia demonstrated through comparisons of deoxyribonucleic acid relatedness. Antonie van Leeuwenhoek 50:209–217

    Article  PubMed  CAS  Google Scholar 

  • Kurtzman CP, Robnett CJ (2003) Phylogenetic relationships among yeasts of the “Saccharomyces complex” determined from multigene sequence analysis. FEMS Yeast Res 3:417–432

    Article  PubMed  CAS  Google Scholar 

  • Kurtzman CP, Suzuki M (2010) Phylogenetic analysis of ascomycete yeasts that form coenzyme Q-9 and the proposal of the new genera Babjeviella, Meyerozyma, Millerozyma, Priceomyces and Scheffersomyces. Mycoscience 51:2–14

    Article  CAS  Google Scholar 

  • Kurtzman CP, Albertyn J, Basehoar-Powers E (2007) Multigene phylogenetic analysis of the Lipomycetaceae and the proposed transfer of Zygozyma species to Lipomyces and Babjevia anomala to Dipodascosis. FEMS Yeast Res 7:1027–1034

    Article  PubMed  CAS  Google Scholar 

  • Kurtzman CP, Robnett CJ, Basehoar-Powers E (2008) Phylogenetic relationships among species of Pichia, Issatchenkia and Williopsis determined from multigene sequence analysis, and the proposal of Barnettozyma gen. nov., Lindnera gen. nov. and Wickerhamomyces gen. nov. FEMS Yeast Res 8:939–954

    Article  PubMed  CAS  Google Scholar 

  • Nakase T, Komagata K (1970) Significance of DNA base composition in the classification of the yeast genus Pichia. J Gen Appl Microbiol 16:511–521

    Article  Google Scholar 

  • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425

    PubMed  CAS  Google Scholar 

  • Smith MTh (1998a) Lipomyces Lodder & Kreger-van Rij. In: Kurtzman CP, Fell JW (eds) The yeasts: a taxonomic study, 4th edn. Elsevier, Amsterdam, pp 248–253

    Chapter  Google Scholar 

  • Smith MTh (1998b) Zygozyma van der Walt & von Arx. In: Kurtzman CP, Fell JW (eds) The yeasts: a taxonomic study, 4th edn. Elsevier, Amsterdam, pp 433–436

    Chapter  Google Scholar 

  • Smith MTh, van der Walt JP, Yamada Y, Batenburg-van der Vegte WH (1989) Zygozyma suomiensis sp. nov. (Lipomycetaceae), a new species from Finland. Antonie van Leeuwenhoek 56:283–288

    Article  PubMed  CAS  Google Scholar 

  • Smith MTh, van der Walt JP, Batenburg-van der Vegte WH (1995) Babjevia gen. nov. - a new genus of the Lipomycetaceae. Antonie van Leeuwenhoek 67:177–179

    Article  PubMed  CAS  Google Scholar 

  • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  PubMed  CAS  Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882

    Article  PubMed  CAS  Google Scholar 

  • van der Walt JP, von Arx JA, Ferreira NP, Richard PDG (1987) Zygozyma gen. nov., a new genus of the Lipomycetaceae. Syst Appl Microbiol 9:115–120

    Google Scholar 

  • van der Walt JP, Smith MTh, Yamada Y, Richard PDG (1989) Zygozyma arxii sp. n. (Lipomycetaceae), a new species from southern Africa. Syst Appl Microbiol 12:288–290

    Google Scholar 

  • van der Walt JP, Wingfield MJ, Yamada Y (1990) Zygozyma smithiae sp. n. (Lipomycetaceae), a new ambrosia yeast from southern Africa. Antonie van Leeuwenhoek 58:95–98

    Article  PubMed  Google Scholar 

  • van der Walt JP, Wingfield MJ, Smith MTh, Batenburg-van der Vegte WH (1991) Septal micropores in Zygozyma and their taxonomic significance. Antonie van Leeuwenhoek 59:77–80

    Article  PubMed  Google Scholar 

  • Yamada Y (1986) The coenzyme Q system in strains of species in the anamorphic yeast genus Myxozyma. J Gen Appl Microbiol 32:259–261

    Article  CAS  Google Scholar 

  • Yamada Y, Kondo K (1972) Taxonomic significance of the coenzyme Q system in yeasts and yeast-like fungi (2). In Fermentation Technology Today: Proceedings of the IVth International Fermentation Symposium, ed. Terui G, Society of Fermentation Technology, Osaka, Japan, pp 781–784

  • Yamada Y, Nakase T (1985) Waltomyces, a new ascosporogenous yeast genus for the Q10-equipped species, slime-producing organisms whose asexual reproduction is by multilateral budding and whose ascospores have smooth surfaces. J Gen Appl Microbiol 31:491–492

    Article  Google Scholar 

  • Yamada Y, Nogawa C (1990) The molecular phylogeny of the lipomycetaceous yeasts based on partial sequences of 18S and 26S ribosomal ribonucleic acids. In Abstracts: The 4th International Mycological Congress, Regensburg, Germany, August 28–September 3, eds. Reisinger A, Bresinsky A, University of Regensburg, Regensburg, p. 63

  • Yamada Y, Nogawa C (1995a) The phylogeny of the Lipomycetaceous yeasts based on the partial sequences of 18S and 26S ribosomal RNAs. Bull Fac Agric Shizuoka Univ 45:13–23

    CAS  Google Scholar 

  • Yamada Y, Nogawa C (1995b) Kawasakia gen. nov. for Zygozyma arxii, the Q9-equipped species in the genus Zygozyma (Lipomycetaceae). Bull Fac Agric Shizuoka Univ 45:31–34

    CAS  Google Scholar 

  • Yamada Y, Okada T, Ueshima O, Kondo K (1973) Coenzyme Q system in the classification of the ascosporogenous yeast genera Hansenula and Pichia. J Gen Appl Microbiol 19:189–208

    Article  CAS  Google Scholar 

  • Yamada Y, Nakase T, van der Walt JP (1986) The coenzyme Q system in strains of species in ascosporogenous yeast genera Lipomyces and Waltomyces. Trans Mycol Soc Japan 27:313–319

    Google Scholar 

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Acknowledgments

The authors would like to express their sincere thanks to Dr. Hiroshi Oyaizu, Professor, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan for having given instruction in partial base sequencing of 18S and 26S rRNAs in 1988.

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Correspondence to Yuzo Yamada.

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Jindamorakot, S., Am-in, S., Yukphan, P. et al. Limtongia gen. nov. for Zygozyma smithiae (Lipomycetaceae). Ann Microbiol 61, 689–693 (2011). https://doi.org/10.1007/s13213-010-0182-5

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  • DOI: https://doi.org/10.1007/s13213-010-0182-5

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