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Cloning and characterization of proliferating cell nuclear antigen gene of Alexandrium catenella (Dinoflagellate) with respect to cell growth

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Abstract

Harmful algal blooms (HABs) have been affecting negatively the shellfish and aquaculture industries around the world. Though a lot of efforts have been made to disclose the changes of environmental factors involved and their effects on the HABs events, the molecular mechanism of this process remains unclear. To address this problem, proliferating cell nuclear antigen gene (pcna) was isolated and characterized from Alexandrium catenella. It showed high homology to those of other dinoflagellates (89% and 91% homology to Pfiesteria piscicid and Pyrocystis lunula, respectively), and also 42%–43% homology to those of plant and animals. The expression level of pcna revealed by quantitative real time PCR was the lowest at the late lagging cell growth phase, increased to the highest at the late exponential phase, and then decreased at the stationary phase. Though the cell growth rate was also changing, no positive correlation between pcna expression level and cell growth rate was displayed throughout the whole cell growth stages (r 2=0.024 6). However, the pcna expression level had the similar trend with the change of cell growth rate throughout the whole growing process, e.g., from increasing at the earlier cell growth stage to decreasing at the following stages, though slightly lagging to the latter.

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References

  • Anderson D M. 1989. Toxic algal blooms and red tides: a global perspective. In: Okaichi T, Anderson D M, eds. Red Tides Biology, Environmental Science and Toxicology. New York: Elsevier, 11–16, 489

    Google Scholar 

  • Bravo R, Frank R, Blundell P A, et al. 1987. Cyclin/PCNA is the auxiliary protein of DNA polymerase-d. Nature, 326: 515–517

    Article  Google Scholar 

  • Burgers P M J. 1991. Saccharomyces cerevisiae replication factor C, II: formation and activity of complexes with proliferating cell nuclear antigen and with DNA polymerase D and E. J Biochem, 266: 22698–22706

    Google Scholar 

  • Cann I K, Ishino O S, Hayash I, et al. 1999. Functional interactions of a homolog of proliferating cell nuclear antigen with DNA polymerases in Archaea. J Bacteriol, 181: 6591–6599

    Google Scholar 

  • Celis J E, Madsen P. 1986. Increased nuclear cyclin/PCNA antigen staining of non S-phase transformed humanamnion cells engaged in nucleotide excision DNA repair. FEBS Let, 209: 277–283

    Article  Google Scholar 

  • Cheng Lichuan, Hwang Shengping L, Chang Jeng. 1997. Gene sequence and expression of an analog of proliferating cell nuclear antigen (PCNA) in the alga Tereaselmis chui and detection of the encoded protein with anti-rat PCNA monoclonal antibody. Appl Environ Miocrobiol, 10: 4010–4014

    Google Scholar 

  • Fukuda Y, Endoh H. 2008. Phylogenetic analyses of the dinoflagellate Noctiluca scintillans based on β-tubulin and Hsp90 genes. Euro J Protistol, 44(1): 27–33

    Article  Google Scholar 

  • Jancovich J K, Mao Jinghe, Chinchar V G, et al. 2003. Genomic sequence of a ranavirus (family Iridoviridae) associated with salamander mortalities in North America. Virol, 316: 90–103

    Article  Google Scholar 

  • Kelman Z. 1997. PCNA: structure, functions and interactions. Oncogene, 14: 629–640

    Article  Google Scholar 

  • Kumar S, Tamura K, Nei M, et al. 2004. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics, 5: 150–163

    Article  Google Scholar 

  • Leander B S, Keeling P J. 2004. Early evolution of dinoflagellates and apicomplexans inferred from HSP90 and actin phylogeny. J Phycol, 40: 341–350

    Article  Google Scholar 

  • Leveson A C, Wong J T Y. 1999. PCNA-like proteins in dinoflagellates. J Phycol, 35: 798–805

    Article  Google Scholar 

  • Lin Senjie, Chang Jeng, Capenter E J. 1994. Detection of proliferating cell nuclear antigen analog in four species of marine phytoplankton. J Phycol, 30: 449–456

    Article  Google Scholar 

  • Lin Senjie, Carpenter E J. 1998. Identification and preliminary characterization of PCNA gene in the marine phytoplankton Dunaliella tertiolecta and Isochrysis galbana. Mol Mar Biol Biotech, 7: 62–71

    Google Scholar 

  • Lin Senjie, Corstjens P L A M. 2002. Molecular cloning and expression of the proliferating cell nuclear antigen gene from the coccolithorid Pleurochrysis carterae (Haptophyceae). J Phycol, 38: 164–173

    Article  Google Scholar 

  • Lise C B, Xavier M, Preben D T. 2008. Molecular characterization and chromosomal assignment of equine cartilage derived retinoic acid sensitive protein (CDRAP)/melanoma inhibitory activity (MIA). Gene, 407(1–2): 98–104

    Google Scholar 

  • Long Hua, Zhou Yan, Yu Jun, et al. 2008. Analyses on harmful algal blooms in Zhejiang coastal waters from 2001 to 2007. Marine Environ Science (in Chinese), 27(A01): 1–4

    Google Scholar 

  • Markley N A, Bonham-Smith P C, Moloney M M. 1992. Molecular cloning and expression of a cDNA encoding the proliferating cell nuclear antigen from Brassica napus (oilseed rape). Genome, 36: 459–466

    Article  Google Scholar 

  • Matsumoto K, Moriuchi T, Koji T, et al. 1987. Molecular cloning of cDNA coding for rat proliferating cell nuclear antigen (PCNA)/cyclin. EMBO Journal, 6: 637–642

    Google Scholar 

  • Murray M, Thompson W. 1980. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research, 8: 4321–4325

    Article  Google Scholar 

  • Okamoto O K, Hastings J W. 2003. Novel dinoflagellate clock-related genes identified through microarray analysis. J Phycol, 3: 519–526

    Article  Google Scholar 

  • Pfaffl M W. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucl Acids Res, 29: e45

    Article  Google Scholar 

  • Prelich G, Tan K, Kostura M, et al. 1987. Functional identity of proliferating cell nuclear antigen and a DNA polymerase auxiliary protein. Nature, 326: 517–520

    Article  Google Scholar 

  • Sambrook J, Fritsch E F, Maniatis T. 1989. Molecular Cloning: A Laboratory Manual (Chinese edition). 2nd ed. New York: Cold Spring Harbor Laboratory Press

    Google Scholar 

  • Sarkar R R, Chattopadhayay J. 2003. Occurrence of planktonic blooms under environmental fluctuations and its possible control mechanism-mathematical models and experimental observations. J Theoretical Biol, 4: 501–516

    Article  Google Scholar 

  • Stephanie K B, Teresa L. 2007. Gene regulation in the marine diatom Thalassiosira pseudonana upon exposure to polycyclic aromatic hydrocarbons (PAHs). Gene, 396(2): 293–302

    Article  Google Scholar 

  • Suzuka I, Daidoji H, Matsuoka M, et al. 1989. Gene for proliferating-cell nuclear antigen (DNA polymerase d auxiliary protein) is present in both mammalian and higher plant genomes. Process of National Academic for Science USA, 86: 3189–3193

    Article  Google Scholar 

  • Taylor F J R. 1993. The species problem and its impact on harmful phytoplankton studies. In: Smayda T J, Shimizu Y, eds. Toxicphytoplankton blooms in the sea. New York: Elsevier Science Publishers, 81–86

    Google Scholar 

  • Thompson J D, Higgins D G, Gibson T J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res, 22: 4673–4680

    Article  Google Scholar 

  • Wood A, Garg P, Burger M J P. 2007. A Ubiquitinbinding Motif in the Translesion DNA Polymerase Rev1 Mediates its Essential Functional Interaction with Ubiquitinated PCNA in Response to DNA Damage. J Biol Chem, 5: 1–14

    Google Scholar 

  • Yamaguchi M, Nishida Y, Moriuchi T, et al. 1990. Drosophila proliferating cell nuclear antigen (cyclin) gene: structure, expression during development, and specific binding of homeodomain proteins to its 58-flanking region. Molecular Cell Biology, 10: 872–879

    Google Scholar 

  • Zhang Huan, Hou Yubo, Lin Senjie. 2006. Isolation and characterization of proliferation cell nuclear antigen from the Dinoflagellate Pfiesteria piscicida. J Eukaryotic Microbiol, 2: 142–150

    Article  Google Scholar 

  • Zhang Chuansong, Wang Jiangtao, Wang Dedi, et al. 2008. The preliminary analysis of nutrients in harmful algal blooms in the East China Sea in the spring and summer of 2005. Acta Oceanol Sinica (in Chinese), 30(3): 153–159

    Google Scholar 

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Correspondence to Zhenghong Sui.

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Foundation item: The Nature Science Foundation of Qingdao, China under contract No. 05-1-JC-87; International Foundation for Science under contract No.AA/16180 awarded to Sui Zhenghong.

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Huang, J., Liang, S., Sui, Z. et al. Cloning and characterization of proliferating cell nuclear antigen gene of Alexandrium catenella (Dinoflagellate) with respect to cell growth. Acta Oceanol. Sin. 29, 90–96 (2010). https://doi.org/10.1007/s13131-010-0040-0

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  • DOI: https://doi.org/10.1007/s13131-010-0040-0

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