Skip to main content
Log in

Isolation of ten microsatellite markers using a pyrosequencing procedure and cross-priming in the Salaria genus

  • Technical Note
  • Published:
Conservation Genetics Resources Aims and scope Submit manuscript

Abstract

Ten new microsatellite markers were isolated from the freshwater blenny, Salaria fluviatilis. These loci were characterised for three distinct populations (Var River and Lake Bourget in France, and Lake Kinneret in Israel). S. fluviatilis populations in the North-West of the Mediterranean Sea are all polymorphic and under Hardy–Weinberg equilibrium. These microsatellite markers are suggested for studying the genetic structure in this area. Seven of the ten microsatellite markers are applicable for all the freshwater blenny populations of the entire Mediterranean basin. Cross-species characterisation was also performed on the peacock blenny, Salaria pavo. Seven of the ten microsatellite loci exhibited successful PCR amplification on this latter species. Polymorphism is observed on four of these seven loci.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  • Almada VC, Robalo JI, Levy A, Freyhof J, Bernardi G, Doadrio I (2009) Phylogenetic analysis of peri-Mediterranean blennies of the genus Salaria: molecular insights on the colonization of freshwaters. Mol Phylogenet Evol 52(2):424–431

    Article  PubMed  CAS  Google Scholar 

  • Briggs JC (2010) A plethora of blennies. Environ Biol Fishes 87:89–92

    Article  Google Scholar 

  • Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol Bioinform Online 1:47–50

    CAS  Google Scholar 

  • IUCN France, MNHN, SFI, ONEMA (2010) La liste rouge des espèces menacées en France—Chapitre Poissons d’eau douce de France métropolitaine. Paris, France

    Google Scholar 

  • Kottelat M (2004) Salaria economidisi, a new species of freshwater fish from Lake Trichonis, Greece, with comments on variation in S. fluviatilis (Teleostei: Blenniidae). Rev Suisse Zool 111(1):121–137

    Google Scholar 

  • Malaussa T, Gilles A, Meglécz E, Blanquart H, Duthoy S, Costedoat C, Dubut V, Pech N, Castagnone-Sereno P, Délye C, Feau N, Frey P, Gauthier P, Guillemaud T, Hazard L, Le Corre V, Lung-Escarmant B, Malé PJG, Ferreira S, Martin JF (2011) High-throughput microsatellite isolation through 454 GS-FLX titanium pyrosequencing of enriched DNA libraries. Mol Ecol Res 11:638–644

    Article  Google Scholar 

  • Neat FC, Lengkeek W, Westerbeek EP, Laarhoven B, Videler JJ (2003) Behavioural and morphological differences between lake and river populations of Salaria fluviatilis. J Fish Biol 63(2):374–387

    Article  Google Scholar 

  • Plaut I (1998) Comparison of salinity tolerance and osmoregulation in two closely related species of blennies from different habitats. Fish Physiol Biochem 19(2):181–188

    Article  CAS  Google Scholar 

  • Vinyoles D, De Sostoa A (2007) Life-history traits of the endangered river blenny Salaria fluviatilis (Asso) and their implications for conservation. J Fish Biol 70(4):1088–1108

    Article  Google Scholar 

  • Zander CD (1986) Blenniidae: 1096–1112. In: Whitehead PJP, Bauchot M-L, Hureau J-C, Nielsen J, Tortonese E (eds) Fishes of the North-eastern Atlantic and the Mediterranean. UNESCO, Paris

    Google Scholar 

Download references

Acknowledgments

We thank several scientists and managers for providing samples: Manuel Valat (FSPPMA, France), Stéphane Lefebvre and Jean-Pierre Bernier (ONEMA, France), Yann Abdallah (MRM, France), Alain Crivelli (Centre de recherche pour la conservation des zones humides méditerranéenne), Menahen Goren (Department of Zoology, Tel Aviv University), technical advisors : Jean-François Martin, Frédérique Cerqueira and Philippe Clair, English correction: Amanda Kusler and grant providers: Fonds Québécois de la Recherche sur la Nature et les Technologies (FQRNT) post-graduate fellowship of M. Laporte and the Natural Sciences and Engineering Research Council (NSERC) research grant of P. Magnan.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Martin Laporte.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Laporte, M., Magnan, P., Justy, F. et al. Isolation of ten microsatellite markers using a pyrosequencing procedure and cross-priming in the Salaria genus. Conservation Genet Resour 4, 151–154 (2012). https://doi.org/10.1007/s12686-011-9496-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12686-011-9496-2

Keywords

Navigation