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Fourteen microsatellite loci cross-amplify in all five kiwi species (Apteryx spp.) and reveal extremely low genetic variation in little spotted kiwi (A. owenii)

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Abstract

We present 14 microsatellite loci that were isolated from little spotted kiwi (LSK, Apteryx owenii). All loci cross-amplify in all kiwi species currently recognized except for one locus in a single species. Little spotted kiwi exhibited lower variation at these loci (mean number of alleles, H E) than other kiwi species, despite the markers having been developed for polymorphism in LSK and a far greater number of LSK genotyped than kiwi of other species. Reliable cross-species amplification and polymorphism make these markers promising new tools for the management of New Zealand’s threatened kiwi.

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References

  • Armour JA, Neumann R, Gobert S et al (1994) Isolation of human simple repeat loci by hybridization selection. Hum Mol Genet 3:599–605

    Article  CAS  PubMed  Google Scholar 

  • Bonin A, Bellemain E, Bronken Eidesen P et al (2004) How to track and assess genotyping errors in population genetic studies. Mol Ecol 13:3261–3273

    Article  CAS  PubMed  Google Scholar 

  • Colbourne RM, Robertson HA (1997) Successful translocations of little spotted kiwi (Apteryx owenii) between offshore islands of New Zealand. Notornis 44:253–258

    Google Scholar 

  • Gautschi B, Tenzer I, Müller JP et al (2000a) Isolation and characterization of microsatellite loci in the bearded vulture (Gypaetus barbatus) and cross-amplification in three Old World vulture species. Mol Ecol 9:2193–2195

    Article  CAS  PubMed  Google Scholar 

  • Gautschi B, Widmer A, Koella J (2000b) Isolation and characterization of microsatellite loci in the Dice Snake (Natrix tessellata). Mol Ecol 9:2191–2193

    CAS  PubMed  Google Scholar 

  • Guo SW, Thompson EA (1992) Performing the exact test of Hardy–Weinberg proportions for multiple alleles. Biometrics 48

  • Holm S (1979) A simple sequentially rejective multiple test procedure. Scand J Stat 6:65–70

    Google Scholar 

  • Holzapfel SA, Robertson HA, McLennan JA et al (2008) Kiwi (Apteryx spp.) recovery plan 2008–2018. Department of Conservation, Threatened Species Recovery Plan 60, Wellington, New Zealand

  • Jensen T, Nutt KJ, Seal BS et al (2008) Isolation and characterization of microsatellite loci in the North Island brown kiwi, Apteryx mantelli. Mol Ecol Res 8:399–401

    Article  CAS  Google Scholar 

  • Levene H (1949) On a matching problem arising in genetics. Ann Math Stat 20:91–94

    Article  Google Scholar 

  • Miskelly CM, Dowding JE, Elliott GP et al (2008) Conservation status of New Zealand birds, 2008. Notornis 55:117–135

    Google Scholar 

  • Raymond M, Rousset F (1995) Genepop version 1.2: population genetics software for exact tests and ecumenicism. J Hered 86:248–249

    Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor

    Google Scholar 

  • Schuelke M (2000) An economic method for the fluorescent labeling of PCR fragments. Nat Biotechnol 18:233–234

    Article  CAS  PubMed  Google Scholar 

  • Shepherd LD, Lambert DM (2006) Nuclear microsatellite DNA markers for New Zealand kiwi (Apteryx spp.). Mol Ecol 6:227–229

    Article  CAS  Google Scholar 

Download references

Acknowledgments

Funding was provided by the Bank of New Zealand Save the Kiwi Trust, Victoria University of Wellington, and the New Zealand Department of Conservation (DOC) Research and Development Group. A postdoctoral grant from the Allan Wilson Centre for Molecular Ecology and Evolution supported KMR during the writing of this manuscript. Kiwi tissue samples were provided by DOC. This work took place under permits from the New Zealand Environmental Risk Management Authority (GMD07075) and DOC (WE/325/EXP), and with the support of Waiorua Bay Trust, Kaitiaki o Kapiti Trust, Te Atiawa Manawhenua ki te Tau Ihu Trust, Te Runanga o Ati Awa ki Whakarongotai, and the Wellington Tenths Trust.

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Correspondence to Kristina M. Ramstad.

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Ramstad, K.M., Pfunder, M., Robertson, H.A. et al. Fourteen microsatellite loci cross-amplify in all five kiwi species (Apteryx spp.) and reveal extremely low genetic variation in little spotted kiwi (A. owenii). Conservation Genet Resour 2 (Suppl 1), 333–336 (2010). https://doi.org/10.1007/s12686-010-9233-2

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  • DOI: https://doi.org/10.1007/s12686-010-9233-2

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