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A Simple Novel Agar Diffusion Method for Isolation of Indigenous Microalgae Chlamydomonas sp. CRP7 and Chlorella sp. CB4 from Operational Swampy Top Soil

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Abstract

A simple agar diffusion method is developed where pure colony of Chlamydomonas sp. CRP7 was isolated from Chlorella sp. CB4 mixtures by passing through agar migration with a light exposure of 6,000 lux for 7 h. The main concept behind it is that Chlamydomonas has flagella and the rhodopsin pigment is attracted towards light. Thus the above two microalgae species can be separated from the mixtures as eye spot serves as a navigator and flagella serves as a propeller for Chlamydomonas spp. Further the genomic DNA was isolated and purified from the above mentioned two species after the separation from the mixtures. PCR amplification was carried out for ITS1, 5.8S and ITS2 regions. The amplified products were sequenced and the sequence analysis confirmed that they belong to Chlamydomonas sp. and Chlorella sp. This is an important augmentation for isolation and separation of microalgae.

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References

  1. Stanier RY, Kunisawa R, Mandel M, Cohen-Bazire G (1971) Purification and properties of unicellular blue-green algae (Order Chroococcales). Bacteriol Rev 35:171–205

    PubMed  CAS  Google Scholar 

  2. Mcdaniel HR, Miiddlebrook JB, Bowman RO (1961) Isolation of pure cultures of algae from contaminated cultures. Appl Microbiol 10:223

    Google Scholar 

  3. Bischoff HW, Bold HC (1963) Phycological studies. IV. Some soil algae from enchanted rock and related algal species. Univ Texas Publ No 6318:1–95

    Google Scholar 

  4. Nguyen TNM, Berzano M, Gualerzi CO, Spurio R (2011) Development of molecular tools for the detection of freshwater diatoms. J Microbiol Methods 84:33–40

    Article  PubMed  CAS  Google Scholar 

  5. Tolvanen, KES, Karp Matti T (2011) Molecular methods for characterizing mixed microbial communities in hydrogen-fermenting systems. Int J Hydrogen Energy 36:5280–5288

    Article  CAS  Google Scholar 

  6. Boyer SL, Flechtner VR, Johansen JR (2001) Is the 16S–23S rRNA Internal Transcribed Spacer Region a good tool for use in molecular systematics and population genetics? A case study in Cyanobacteria. Mol Biol Evol 18:1057–1069

    Article  PubMed  CAS  Google Scholar 

  7. Rivas R, Velázquez E, Zurdo-Piñeiro JL, Mateos PF, Molina EM (2004) Identification of microorganisms by PCR amplification and sequencing of a universal amplified ribosomal region present in both prokaryotes and eukaryotes. J Microbiol Methods 56:413–426

    Article  PubMed  CAS  Google Scholar 

  8. Gorman DS and Levine RP (1965) Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardii. Proc Natl Acad Sci USA 54:1665–1669

    Article  PubMed  CAS  Google Scholar 

  9. Alvarez EV, Lago-Leston, A, Pearson GA, Serrao EA, Procaccini G, Duarte CM, Marba N (2006) Genomic DNA isolation from green and brown algae (Caulerpales and Fucales) for microsatellite library construction. J Phycol 42:741–745

    Article  Google Scholar 

  10. Timmins M, Thomas-Hall SR, Darling A, Zhang E, Hankamer B, Marx UC, Schenk PM (2009) Phylogenetic and molecular analysis of hydrogen-producing green algae. J Exp Bot 60:1691–1702

    Article  PubMed  CAS  Google Scholar 

  11. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance and Maximum Parsimony Methods. Mol Biol Evol 28:2731–2739

    Article  PubMed  CAS  Google Scholar 

  12. Proschold T, Harris EH, Coleman AW (2005) Portrait of a species: Chlamydomonas reinhardtii.170:1601–1610

    CAS  Google Scholar 

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Acknowledgments

This work was done under the Innovative Project Scheme of BIT, Mesra (No. GO/Con Ord/2011-12/4563). Authors acknowledge the Department of Agriculture, Government of Jharkhand for providing infrastructure facilities. CB acknowledges the financial support as JRF from BIT, Mesra

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Correspondence to Pratyoosh Shukla.

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Banerjee, C., Bandopadhyay, R. & Shukla, P. A Simple Novel Agar Diffusion Method for Isolation of Indigenous Microalgae Chlamydomonas sp. CRP7 and Chlorella sp. CB4 from Operational Swampy Top Soil. Indian J Microbiol 52, 710–712 (2012). https://doi.org/10.1007/s12088-012-0295-6

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  • DOI: https://doi.org/10.1007/s12088-012-0295-6

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