Skip to main content
Log in

Map-based cloning and expression analysis of BMR-6 in sorghum

  • RESEARCH ARTICLE
  • Published:
Journal of Genetics Aims and scope Submit manuscript

Abstract

Brown midrib mutants in sorghum are associated with reduced lignin content and increased cell wall digestibility. In this study, we characterized a bmr-6 sorghum mutant, which shows reddish pigment in the midrib and stem after the fifth-leaf stage. Compared to wild type, Kalson lignin content of bmr-6 is decreased significantly. We used histological analysis to determine that the mutant exhibited a modified pattern of lignin staining and found an increased polysaccharide content. We cloned BMR-6 gene, a gene encoded a cinnamyl alcohol dehydrogenase (CAD), using a map-based cloning approach. Genetic complementation confirmed that CAD is responsible for the BMR-6 phenotype. BMR-6 gene was expressed in all tested sorghum tissues, with the highest being in midrib and stem. Transient expression assays in Nicotiana benthamiana leaves demonstrated cytomplasmic localization of BMR-6. We found that the expression level of bmr-6 was significantly decreased in the mutant but expression of SbCAD3 and SbCAD5 were significantly increased. Our results indicate that BMR-6 not only affects the distribution of lignin but also the biosynthesis of lignin in sorghum.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7
Figure 8

Similar content being viewed by others

References

  • Baucher M., Halpin C., Petit-Conil M. and Boerjan W. 2003 Lignin: genetic engineering and impact on pulping. Crit. Rev. Biochem. Mol. Biol. 38, 305–350.

  • Bout S. and Vermerris W. 2003 A candidate-gene approach to clone the sorghum brown midrib gene encoding caffeic acid O-methyltransferase. Mol. Genet. Genomics 269, 205–214.

  • Bukh C., Nord-Larsen P. H. and Rasmussen S. K. 2012 Phylogeny and structure of the cinnamyl alcohol dehydrogenase gene family in Brachypodium distachyon. J. Exp. Bot. 63, 6223–6236.

  • Bouvier d’Yvoire M., Bouchabke-Coussa O., Voorend W., Antelme S., Cézard L., Legée F. et al. 2013 Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J. 73, 496–508.

  • Chen Y., Liu H., Ali F., Scott M. P., Ji Q., Frei U. K. et al. 2012 Genetic and physical fine mapping of the novel brown midrib gene bm6 in maize (Zea mays L.) to a 180 kb region on chromosome 2. Theor. Appl. Genet. 125, 1223–1235.

  • Dauwe R., Morreel K., Goeminne G., Gielen B., Rohde A., Van Beeumen J. et al. 2007 Molecular phenotyping of lignin-modified tobacco reveals associated changes in cell wall metabolism, primary metabolism, stress metabolism and photorespiration. Plant J. 52, 263–285.

  • Dixon R. A, Chen F., Guo D. and Parvathi K. 2001 The biosynthesis of monolignols: a “metabolic grid”, or independent pathways to guaiacyl and syringyl units? Phytochemistry 57, 1069–1084.

  • Eudes A., Pollet B., Sibout R., Do C. T., Seguin A., Lapierre C. et al. 2006 Evidence for a role of AtCAD 1 in lignification of elongating stems of Arabidopsis thaliana. Planta 225, 23–39.

  • Goodin M. M., Dietzgen R. G., Schichnes D., Ruzin S. and Jackson A. O. 2002 pGD vectors: versatile tools for the expression of green and red fluorescent protein fusions in agroinfiltrated plant leaves. Plant J. 31, 375–383.

  • Grabber J. H., Hatfield R. D. and Ralph J. 1998 Diferulate cross-links impede the enzymatic degradation of non-lignified maize walls. J. Sci. Food Agri. 77, 193–200.

  • Halpin C., Holt K., Chojecki J., Oliver D., Chabbert B., Monties B. et al. 1998 Brown-midrib maize (bm1)—a mutation affecting the cinnamyl alcohol dehydrogenase gene. Plant J. 14, 545–553.

  • Haney L. L. H., Hake S. S. H. and Scott M. P. S. 2008 Allelism testing of Maize Coop Stock Center lines containing unknown brown midrib alleles. Crop Sci. 82, 4–5.

  • Hatfield R. D., Jung H. G., Ralph J., Buxton D. R. and Weimer P. J. 1994 A comparison of the insoluble residues produced by the Klason lignin and acid detergent lignin procedures. J. Sci. Food Agri. 65, 51–58.

  • Hirano K., Aya K., Kondo M., Okuno A., Morinaka Y. and Matsuoka M. 2012 OsCAD2 is the major CAD gene responsible for monolignol biosynthesis in rice culm. Plant Cell Rep. 31, 91–101.

  • Kim S. J., Kim M. R., Bedgar D. L., Moinuddin S. G., Cardenas C. L., Davin L. B. et al. 2004 Functional reclassification of the putative cinnamyl alcohol dehydrogenase multigene family in Arabidopsis. Proc. Natl. Acad. Sci. USA 101, 1455–1460.

  • Livak K. J. and Schmittgen T. D. 2001 Analysis of relative gene expression data using real-time quantitative PCR and the 2(−Delta Delta C(T)) method. Methods 25, 402–408.

  • Li X., Yang Y., Yao J., Chen G., Li X., Zhang Q. et al. 2009 Flexible culm 1 encoding a cinnayl-alcohol dehydrogenase controls culm mechanical strength in rice. Plant Mol. Biol. 69, 685–697.

  • Lorenz A. J., Anex R. P., Isci A., Coors J. G, de Leon N. and Weimer P. J. 2009 Forage quality and composition measurements as predictors of ethanol yield from maize (Zea mays L.) stover. Biotechnol. Biofuels. 2, 5.

  • Marita J. M., Vermerris W., Ralph J. and Hatfield R. D. 2003 Variations in the cell wall composition of maize brown midrib mutants. J. Agric. Food Chem. 51, 1313–1321.

  • Oliver A. L., Grant R. J., Pedersen J. F. and O’Rear J. 2004 Comparison of brown midrib-6 and -18 forage sorghum with conventional sorghum and corn silage in diets of lactating dairy cows. J. Dairy Sci. 87, 637–644.

  • Oliver A. L., Pedersen J. F., Grant R. J. and Klopfenstein T. J. 2005 Comparative effects of the sorghum bmr-6 and bmr-12 genes: I. Forage sorghum yield and quality. Crop Sci. 45, 2234– 2239.

  • Paterson A. H., Bowers J. E., Bruggmann R., Bubchak I., Grimwood J., Gundlach H. et al. 2009 The Sorghum bicolor genome and the diversification of grasses. Nature 457, 551–556.

  • Porter K. S., Axtell J. D., Lechtenberg V. L. and Colenbrander V. F. 1978 Phenotype, fiber composition, and in vitro dry matter disappearance of chemically-induced brown midrib (bmr) mutants of sorghum. Crop Sci. 18, 205–208.

  • Ramu P., Deshpande S. P., Senthilvel S., Jayashree B., Billot C., Deu M. et al. 2010 In silico mapping of important genes and markers available in the public domain for efficient sorghum breeding. Mol. Breed. 26, 409–418.

  • Sibout R., Eudes A., Mouille G., Pollet B., Lapierre C., Jouanin L. et al. 2005 CINNAMYL ALCOHOL DEHYDROGENASE-C and -D are the primary genes involved in lignin biosynthesis in the floral stem of Arabidopsis. Plant Cell 17, 2059–2076.

  • Supartana P., Shimizu T., Shioiri H., Nogawa M., Nozue M. and Kojima M. 2005 Development of simple and efficient in planta transformation method for rice (Oryza sativa L.) using Agrobacterium tumefaciens. J. Biosci. Bioeng. 100, 391–397.

  • Vanholme R., Morreel K., Ralph J. and Boerjan W. 2008 Lignin engineering. Curr. Opin. Plant Biol. 11, 278–285.

  • Vignols F., Rigau J., Torres M. A., Capellades M. and Puigdomenech P. 1995 The brown midrib3 (bm3) mutation in maize occurs in the gene encoding caffeic acid O-methyltransferase. Plant Cell 7, 407–416.

  • Yan L., Liu S., Zhao S., Kang Y., Wang D., Gu T. et al. 2012 Identification of differentially expressed genes in sorghum (Sorghum bicolor) brown midrib mutants. Physiol. Plant 146, 375–387.

  • Yan L., Xu C., Kang Y., Gu T., Wang D., Zhao S. et al. 2013 The heterologous expression in Arabidopsis thaliana of sorghum transcription factor SbbHLH1 downregulates lignin synthesis. J. Exp. Bot. 64, 3021–3032.

  • Zhang K., Qian Q., Huang Z., Wang Y., Li M., Hong L. et al. 2006 Gold HULL AND INTERNODE2 encodes a primarily multifunctional cinnamyl-alcohol dehydrogenase in rice. Plant Phsyiol. 140, 972–983.

  • Zhu L., Shan H., Chen S., Jiang J., Gu C., Zhou G. et al. 2013 The heterologous expression of the chrysanthemum R2R3-MYB transcription factor alters lignin composition and represses flavonoid synthesis in Arabidopsis thaliana. PLoS One 8, e65680.

Download references

Acknowledgements

This work was supported by grants from the National Natural Science Foundation (31301383 and 31071470), the Key-construction Subject Plan of Anhui Province, the Anhui Science and Technology University Research Programme (ZRC2013371), and the Planning Subject of ‘the Twelfth Five Year Plan’ in the National Science and Technology for the Rural Development in China (2011BAD17B03).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to QIUWEN ZHAN.

Additional information

Jieqin Li and Lihua Wang contributed equally to this work.

[Li J., Wang L., Zhan Q. and Liu Y. 2015 Map-based cloning and expression analysis of BMR-6 in sorghum. J. Genet. 94, xx–xx]

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

LI, J., WANG, L., ZHAN, Q. et al. Map-based cloning and expression analysis of BMR-6 in sorghum. J Genet 94, 445–452 (2015). https://doi.org/10.1007/s12041-015-0550-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12041-015-0550-9

Keywords

Navigation