Abstract
Forensic biology is a sub-discipline of biological science with an amalgam of other branches of science used in the criminal justice system. Any nucleated cell/tissue harbouring DNA, either live or dead, can be used as forensic exhibits, a source of investigation through DNA typing. These biological materials of human origin are rich source of proteins, carbohydrates, lipids, trace elements as well as water and, thus, provide a virtuous milieu for the growth of microbes. The obstinate microbial growth augments the degradation process and is amplified with the passage of time and improper storage of the biological materials. Degradation of these biological materials carriages a huge challenge in the downstream processes of forensic DNA typing technique, such as short tandem repeats (STR) DNA typing. Microbial degradation yields improper or no PCR amplification, heterozygous peak imbalance, DNA contamination from non-human sources, degradation of DNA by microbial by-products, etc. Consequently, the most precise STR DNA typing technique is nullified and definite opinion can be hardly given with degraded forensic exhibits. Thus, suitable precautionary measures should be taken for proper storage and processing of the biological exhibits to minimize their decaying process by micro-organisms.
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Abreu, A. E. S., & Vilar, O. M. (2017). Influence of composition and degradation on the shear strength of municipal solid waste. Waste Management, 68, 263–274.
Adrio, J. L., & Demain, A. L. (2014). Microbial enzymes: Tools for biotechnological processes. Biomolecules, 4, 117–139.
Alaeddini, R. (2012). Forensic implications of PCR inhibition—A review. Forensic Science International Genetics, 6, 297–305.
Alaeddini, R., Walsh, S. J., & Abbas, A. (2010). Forensic implications of genetic analyses from degraded DNA-a review. Forensic Science International Genetics, 4, 148–157.
Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., & Walter, P. (2002). Molecular biology of the cell (4th ed.). New York: Garland Science. ISBN 978-0849371615.
Ali, S. M. F., & Tanwir, F. (2012). Oral microbial habitat a dynamic entity. Journal of Oral Biology and Craniofacial Research, 2, 181–187.
Al-Soud, W. A., & Radstrom, P. (2001). Purification and characterization of PCR-inhibitory components in blood cells. Journal of Clinical Microbiology, 39, 485–493.
Alvarez, F. J., Ryman, K., Hooijmaijers, C., Bulone, V., & Ljungdahl, P. O. (2015). Diverse nitrogen sources in seminal fluid act in synergy to induce filamentous growth of Candida albicans. Applied and Environmental Microbiology, 81, 2770–2780.
Anderson, M. T., Byerly, L., Apicella, M. A., & Seifert, H. S. (2016). Seminal plasma promotes Neisseria gonorrhoeae aggregation and biofilm formation. Journal of Bacteriology, 198, 2228–2235.
Ansede, J. H., Friedman, R., & Yoch, D. C. (2001). Phylogenetic analysis of culturable dimethyl sulfide-producing bacteria from a spartina-dominated salt marsh and estuarine water. Applied and Environmental Microbiology, 67, 1210–1217.
Anzai-Kanto, E., Hirata, M. H., Hirata, R. D. C., Nunes, F. D., Melani, R. F. H., & Oliveira, R. N. (2005). DNA extraction from human saliva deposited on skin and its use in forensic identification procedures. Brazilian Oral Research, 19, 216–222.
Ashwini, N. K., Manjunath, M. R., & Kusuma, K. N. (2015). Evidentiary value and effects of contaminants on blood group factors in medico-legal grounds. International Archives of Integrated Medicine, 2, 68–72.
Atique, F. B., & Khalil, M. M. R. (2014). The bacterial contamination of allogeneic bone and emergence of multidrug-resistant bacteria in tissue bank. BioMed Research International. https://doi.org/10.1155/2014/430581.
Banfi, G., Salvagno, G. L., & Lippi, G. (2007). The role of ethylenediamine tetraacetic acid (EDTA) as in vitro anticoagulant for diagnostic purposes. Clinical Chemistry and Laboratory Medicine, 45, 565–576.
Barbaro, A., Cormaci, P., & Barbaro, A. (2006). DNA typing from 15-year-old bloodstains. International Congress Series, 1288, 550–552.
Beckett, S. M., Laughton, S. J., Pozza, L. D., McCowage, G. B., Marshall, G., Cohn, R. J., et al. (2008). Buccal swabs and treated cards: Methodological considerations for molecular epidemiologic studies examining pediatric populations. American Journal of Epidemiology, 167, 1260–1267.
Berroteran, A., Perrone, M., Correnti, M., Cavazza, M. E., Tombazzi, C., Goncalvez, R., et al. (2002). Detection of Helicobacter pylori DNA in the oral cavity and gastroduodenal system of a Venezuelan population. Journal of Medical Microbiology, 51, 764–770.
Bianconi, E., Piovesan, A., Facchin, F., Beraudi, A., Casadei, R., Frabetti, F., et al. (2013). An estimation of the number of cells in the human body. Annals of Human Biology, 40, 463–471.
Binte Atique, F. B., & Khalil, M. M. R. (2014). The bacterial contamination of allogeneic bone and emergence of multidrug-resistant bacteria in tissue bank. BioMed Research International. https://doi.org/10.1155/2014/430581.
Booth, T. J. (2016). An investigation into the relationship between funerary treatment and bacterial bioerosion in european archaeological human bone. Archaeometry, 58, 484–499.
Brecher, M. E., & Hay, S. N. (2005). Bacterial contamination of blood components. Clinical Microbiology Reviews, 18, 195–201.
Budowle, B., & van Daal, A. (2009). Extracting evidence from forensic DNA analyses: Future molecular biology directions. BioTechniques, 46, 339–350.
Budowle, B., Schutzer, S. E., Burans, J. P., Beecher, D. J., Cebula, T. A., Chakraborty, R., et al. (2006). Quality sample collection, handling, and preservation for an effective microbial forensics program. Applied and Environmental Microbiology, 72, 6431–6438.
Burg, A., Kahn, R., & Welch, K. (2011). DNA testing of sexual assault evidence: The laboratory perspective. Journal of Forensic Nurshing, 7, 145–152.
Buschlediller, G., Zeronian, S. H., Pan, N., & Yoon, M. Y. (1994). Enzymatic hydrolysis of cotton, linen, ramie, and viscose rayon fabrics. Textile Research Journal, 64, 270–279.
Butler, J. M., Buel, E., Crivellente, F., & McCord, B. R. (2004). Forensic DNA typing by capillary electrophoresis using the ABI Prism 310 and 3100 genetic analyzers for STR analysis. Electrophoresis, 25, 1397–1412.
Byun, R., Nadkarni, M. A., Chhour, K. L., Martin, F. E., Jacques, N. A., & Hunter, N. (2004). Quantitative analysis of diverse Lactobacillus species present in advanced dental caries. Journal of Clinical Microbiology, 42, 3128–3136.
Callewaert, C., De Maeseneire, E., Kerckhof, F. M., Verliefde, A., de Wiele, T. V., & Boon, N. (2014). Microbial odor profile of polyester and cotton clothes after a fitness session. Applied and Environmental Microbiology, 80, 6611–6619.
Campos, P. F., Craig, O. E., Walker, G. T., Peacock, E., Willerslev, E., & Gilbert, M. T. P. (2012). DNA in ancient bone—Where is it located and how should we extract it? Annals of Anatomy, 194, 7–16.
Canny, G. O., & McCormick, B. A. (2008). Bacteria in the Intestine, Helpful Residents or Enemies from Within? Infection and Immunity, 76, 3360–3373.
Carrion, O., Curson, A. R. J., Kumaresan, D., Fu, Y., Lang, A. S., Mercade, E., et al. (2015). A novel pathway producing dimethylsulphide in bacteria is widespread in soil environments. Nature Communications, 6, 6579. https://doi.org/10.1038/ncomms7579.
Casqueiro, J., Casqueiro, J., & Alves, C. (2012). Infections in patients with diabetes mellitus: A review of pathogenesis. Indian Journal of Endocrinology and Metabolism, 16, S27–S36.
Chaturvedi, U., Tiwari, A. K., Ratta, B., Ravindra, P. V., Rajawat, Y. S., Palia, S. K., et al. (2008). Detection of canine adenoviral infections in urine and faces by the polymerase chain reaction. Journal of Virology Methods, 149, 260–263.
Cogen, A. L., Nizet, V., & Gallo, R. L. (2008). Skin microbiota: A source of disease or defence? Brazilian Journal of Dermatology, 158, 442–455.
Corrons, J. L. V., Briggs, C., Lopez, R. S., Albarede, S., de la Salle, B., Meatrii, Z. F., et al. (2014). Effect of EDTA-anticoagulated whole blood storage on cell morphology examination. A need for standardization. International Journal of Laboratory Hematology, 36, 222–226.
Damann, F. E., Williams, D. E., & Layton, A. C. (2015). Potential use of bacterial community succession in decaying human bone for estimating postmortem interval. Journal of Forensic Sciences, 60, 844–850.
Damgaard, P. B., Margaryan, A., Schroeder, H., Orlando, L., Willerslev, E., & Allentoft, M. E. (2015). Improving access to endogenous DNA in ancient bones and teeth. Scientific Report, 5, 11184.
De Marco, J. L., Inglis, M. C. V., & Felix, C. R. (2003). Production of hydrolytic enzymes by Trichoderma isolates with antagonistic activity against Crinipellis perniciosa, the causal agent of witches broom of cocoa. Brazilian Journal of Microbiology, 34, 33–38.
de Vos, V. M. (2015). Microbial biofilms and the human intestine microbiome. Biofilms and Microbiomes. https://doi.org/10.1038/npjbiofilms.2015.5.
Dewhirst, F. E., Chen, T., Izard, J., Paster, B. J., Tanner, A. C. R., Yu, W. H., et al. (2010). The human oral microbiome. Journal of Bacteriology, 192, 5002–5017.
Diegoli, T. M. (2015). Forensic typing of short tandem repeat markers on the X and Y chromosomes. Forensic Science International: Genetics, 18, 140–151.
Dissing, J., Søndervang, A., & Lund, S. (2010). Exploring the limits for the survival of DNA in blood stains. Journal of Forensic and Legal Medicine, 17, 392–396.
Dolnık, V. (1999). DNA sequencing by capillary electrophoresis (review). Journal of Biochemical and Biophysical Methods, 41, 103–119.
Enwuru, C. A., Iwalokun, B., Enwuru, V. N., Ezechi, O., & Oluwadun, A. (2016). The effect of presence of facultative bacteria species on semen and sperm quality of men seeking fertility care. African Journal of Urology, 22, 213–222.
Erkmen, O., Bozoglu, T. F. (Eds.) (2016). Food preservation by reducing water activity. In Food microbiology: Principles and practices. Wiley: Chichester.
Feng, X. (2009). Chemical and biochemical basis of cell-bone matrix interaction in health and disease. Current Chemical Biology, 3, 189–196.
Fleming, R. I., & Harbison, S. (2010). The use of bacteria for the identification of vaginal secretions. Forensic Science International Genetics, 4, 311–315.
Frank, D. N., St Amand, A. L., Feldman, R. A., Boedeker, E. C., Harpaz, N., & Pace, N. R. (2007). Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proceedings of National Academy of Science USA, 104, 13780–13785.
Ghatak, S., Muthukumaran, R. B., & Nachimuthu, S. K. (2013). A simple method of genomic DNA extraction from human samples for PCR-RFLP analysis. Journal of Biomolecular Techniques, 24, 224–231.
Gill, P., Jeffreys, A. J., & Werrett, D. J. (1985). Forensic application of DNA ‘fingerprints. Nature, 318, 577–579.
Gingras, F., Paqueta, C., Bazineta, M., Grangera, D., Marcoux-Legaulta, K., Fiorilloa, M., et al. (2009). Biological and DNA evidence in 1000 sexual assault cases. Forensic Science International: Genetics Supplement Series, 2, 138–140.
Girish, K. L., Rahman, F. S., & Tippu, S. R. (2010). Dental DNA fingerprinting in identification of human remains. Journal of Forensic Dental Sciences, 2, 63–68.
Grice, E. A., & Segre, J. A. (2011). The skin microbiome. Nature Review. Microbiology, 9, 244–253.
Harrington, D. J. (1996). Bacterial collagenases and collagen-degrading enzymes and their potential role in human disease. Infection and Immunity, 64, 1885–1891.
Hasan, N. A., Young, B. A., Minard-Smith, A. T., Saeed, K., Li, H., Heizer, E. M., et al. (2014). Microbial community profiling of human saliva using shotgun metagenomic sequencing. PLoS ONE. https://doi.org/10.1371/journal.pone.0097699.
Hirayama, K., Baranczewski, P., Akerlund, J. E., Midtvedt, T., Moller, L., & Rafter, J. (2000). Effects of human intestinal flora on mutagenicity of and DNA adduct formation from food and environmental mutagens. Carcinogenesis, 21, 2105–2111.
Hoffmann, G. R. (1980). Genetic effects of dimethyl sulfate, diethyl sulfate, and related compounds. Mutation Research, 75, 63–129.
Hoskins, L. C., & Boulding, E. T. (1976). Degradation of human blood group antigens in human colon ecosystems. The Journal of Clinical Investigation, 57, 63–73.
Hyde, E. R., Haarmann, D. P., Lynne, A. M., Bucheli, S. R., & Petrosino, J. F. (2013). The living dead: Bacterial community structure of a cadaver at the onset and end of the bloat stage of Decomposition. PLoS ONE, 8(10), e77733. https://doi.org/10.1371/journal.pone.0077733.
Inami, K., Mine, Y., Tatsuzaki, J., Mori, C., & Mochizuki, M. (2017). Isolation and characterization of antimutagenic components of Glycyrrhiza aspera against N-methyl-N-nitrosourea. Genes and Environment. https://doi.org/10.1186/s41021-016-0068-2.
Iwamura, E. S. M., Vieira, J. A. S., & Muñoz, D. R. (2004). Human identification and analysis of DNA in bones. Revista Do Hospital Das Clinicas, 59, 383–388.
Jakubowska, J., Maciejewska, A., & Pawłowski, R. (2012). Comparison of three methods of DNA extraction from human bones with different degrees of degradation. International Journal of Legal Medicine, 126, 173–178.
Jans, M. M. E. (2008). Microbial bioerosion of bone-a review. In M. Wisshak, & L. Tapanila (Eds.), Current Developments in Bioerosion. Erlangen Earth Conference Series. https://doi.org/10.1007/978-3-540-77598-0_20, © Springer, Berlin 2008.
Javurek, A. B., Spollen, W. G., Ali, A. M. M., Johnson, S. A., Lubahn, D. B., Bivens, N. J., et al. (2016). Discovery of a novel seminal fluid microbiome and influence of estrogen receptor alpha genetic status. Scientific Reports. https://doi.org/10.1038/srep23027.
Jena, N. R. (2012). DNA damage by reactive species: Mechanisms, mutation and repair. Journal of BioScience, 37, 503–517.
Jignal, P., Shaikh, M. G., & Darshan, M. (2014). Forensic conception: DNA typing of FTA spotted samples. Journal of Applied Biology and Biotechnology, 2, 21–29.
Jones, R. M., Mercante, J. W., & Neish, A. S. (2012). Reactive oxygen production induced by the gut microbiota: Pharmacotherapeutic implications. Current Medicinal Chemistry, 19, 1519–1529.
Jorde, L. B., & Wooding, S. P. (2004). Genetic variation, classification and ‘race’. Nature Genetics, 36, S28–S33.
Kang, J. G., Kim, S. H., & Ahn, T. Y. (2006). Bacterial diversity in the human saliva from different ages. Journal of Microbiology, 44, 572–576.
Killick, S. R., Leary, C., Trussell, J., & Guthrie, K. A. (2011). Sperm content of pre-ejaculatory fluid. Human Fertility, 14, 48–52.
Kornberg, A., & Baker, T. (1992). DNA replication (2d ed., pp. 771–773). New York: W. H. Freeman and Company.
Kotabagi, R. B., Charati, S. C., & Jayachandar, D. (2005). Clinical autopsy vs medicolegal autopsy. Medical Journal Armed Forces India, 61, 258–263.
Kulkarni, U. K., Gosavi, N. R., & Kulkarni, K. V. (2016). Effect of ageing and environment of north Maharashtra on ABO grouping substances of blood stain. Journal of Pharmaceutical, Chemical and Biological Sciences, 3, 608–611.
Leach, S. A., & Critchley, P. (1966). Bacterial degradation of glycoprotein sugars in human saliva. Nature. https://doi.org/10.1038/209506a0.
Lee, H. C., & Ladd, C. (2001). Preservation and collection of biological evidence. Croatian Medical Journal, 42, 225–228.
Liang, W., Li, Z., & Zhang, L. (2016). Research progress in forensic body fluids identification based on nucleic acid molecules. International Journal of Forensic Science, 1, 1–5.
Loreille, O. M., Diegoli, T. M., Irwin, J. A., Coble, M. D., & Parsons, T. J. (2007). High efficiency DNA extraction from bone by total demineralization. Forensic Science International Genetics, 1, 191–195.
Ma, B., Forney, L. J., & Ravel, J. (2012). The vaginal microbiome: Rethinking health and diseases. Annual Review in Microbiology, 66, 371–389.
Magalhães, T., Dinis-Oliveira, R. J., Silva, B., Corte-Real, F., & Vieira, D. N. (2015). Biological evidence management for DNA analysis in cases of sexual assault. The Scientific World Journal. https://doi.org/10.1155/2015/365674.
Maher, N., Dillon, H. K., Vermund, S. H., & Unnasch, T. R. (2001). Magnetic bead capture eliminates PCR inhibitors in samples collected from the air borne environment, permitting detection of Pneumocystis carinii DNA. Applied and Environmental Microbiology, 67, 449–452.
Martín, R., Miquel, S., Ulmer, J., Kechaou, N., Langella, P., & Humarán, L. G. B. (2013). Role of commensal and probiotic bacteria in human health: A focus on inflammatory bowel disease. Microbial Cell Factories, 12, 71.
McClintock, J. T. (2014). Forensic analysis of biological evidence: A laboratory guide for serological and DNA typing. CRC Press, 6000 Broken Sound Parkway NW Suite 300. pp. 176.
McDonald, C., Allen, J., Brailsford, S., Roy, A., Ball, J., Moule, R., et al. (2017). Bacterial screening of platelet components by national health service blood and transplant, an effective risk reduction measure. Transfusion, 57, 1122–1131.
Moretti, E., Capitani, S., Figura, N., Pammolli, A., Federico, M. G., Giannerini, V., et al. (2009). The presence of bacteria species in semen and sperm quality. Journal of Assisted Reproduction and Genetics, 26, 47–56.
Nicholas, S., & Jakubovics, N. S. (2015). Saliva as the sole nutritional source in the development of multispecies communities in dental plaque. In T. Conway & P. Cohen (Eds.), Metabolism and bacterial pathogenesis (pp. 263–277). Washington, DC: ASM Press.
Nielsen, P. V., & Haasum, I. (1997). Packaging conditions hindering fungal growth on cheese. Scandinavian Dairy Information, 4, 22–25.
Okazaki, M., Yoshida, Y., Yamaguchi, S., Kaneno, M., & Elliott, J. C. (2001). Affinity binding phenomena of DNA onto apatite crystals. Biomaterials, 22, 2459–2464.
Opota, O., Jaton, K., & Greub, G. (2015). Microbial diagnosis of bloodstream infection: Towards molecular diagnosis directly from blood. Clinical Microbiology & Infection, 21, 323–331.
Orgel, J. P. R. O., Irving, T. C., Miller, A., & Wess, T. J. (2005). Microfibrillar structure of type I collagen in situ. Proceedings of National Academy of Science USA, 103, 9001–9005.
Orgel, J. P. R. O., Miller, A., Irving, T. C., Fischetti, R. F., Hammersley, A. P., & Wess, T. J. (2001). The in situ supermolecular structure of type I collagen. Structure, 9, 1061–1069.
Owen, D. H., & Katz, D. E. (2005). A review of the physical and chemical properties of human semen and the formulation of a semen simulant. Journal of Andrology, 26, 459–469.
Pan, K., Deng, D., & Li, T. (1995). Preliminary studies on microbe-mediated N-nitrosamide synthesis. Chinese Journal of Preventive Medicine, 29, 222–224.
Phillips, M. L. (2008). Crime scene genetics: Transforming forensic science through molecular technologies. BioScience, 58, 484–489.
Pishchany, G., & Skaar, E. P. (2012). Taste for blood: Hemoglobin as a nutrient source for pathogens. PLoS Pathogens, 8, e1002535.
Putkonen, M. T., Palo, J. U., Cano, J. M., Hedman, M., & Sajantila, A. (2010). Factors affecting the STR amplification success in poorly preserved bone samples. Investigative Genetics. https://doi.org/10.1186/2041-2223-1-9.
Qin, J. J., Li, R. Q., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., et al. (2010). A human gut microbial gene catalogue established by metagenomic sequencing. Nature, 464, 59–70.
Raffi, R. O., Moghissi, K. S., & Sacco, A. G. (1977). Proteins of human vaginal fluid. Fertility and Sterility, 28, 1345–1348.
Rahman, N. A., Das, S., Chaudhari, V. A., Nandagopal, S., & Badhe, B. (2017). Blending of rodenticide and battery acid – a rare and fatal suicide mix. Egyptian Journal of Forensic Science, 7, 8.
Ranneklev, S. B., & Baath, E. (2001). Temperature-driven adaptation of the bacterial community in peat measured by using thymidine and leucine incorporation. Applied and Environmental Microbiology, 67, 1116–1122.
Raut, S., Sen, S. K., Kabir, N. A., Satpathy, S., & Raut, S. (2012). Isolation and characterization of protease producing bacteria from upper respiratory tract of wild chicken. Biotransformation, 8, 326–330.
Roewer, L. (2009). Y chromosome STR typing in crime casework. Forensic Science, Medicine and Pathology, 5, 77–84.
Roewer, L. (2013). DNA fingerprinting in forensics: Past, present and future. Investigative Genetics, 4, 22.
Russell, F. M., Biribo, S. S. N., Selvaraj, G., Oppedisano, F., Warren, S., Seduadua, A., et al. (2006). As a bacterial culture medium, citrated sheep blood agar is a practical alternative to citrated human blood agar in laboratories of developing countries. Journal of Clinical Microbiology, 44, 3346–3351.
Saeid, A., Labuda, M., Chojnacka, K., & Gorecki, H. (2014). Valorization of bones to liquid phosphorus fertilizer by microbial solubilization. Waste Biomass Valorization, 5, 265–272.
Saunders, C. W., Scheynius, A., & Heitman, J. (2012). Malassezia fungi are specialized to live on skin and associated with dandruff, eczema, and other skin diseases. PLoS Pathogens, 8, e1002701. https://doi.org/10.1371/journal.ppat.1002701.
Schrader, C., Schielke, A., Ellerbroek, L., & Johne, R. (2012). PCR inhibitors- occurrence, properties and removal. Journal of Applied Microbiology, 113, 1014–1026.
Sentamilselvi, G., Janaki, C., & Murugusundram, S. (2009). Trichomycoses. International Journal of Trichology, 1, 100–107.
Shields, R. C., Mokhtar, N., Ford, M., Hall, M. J., Burgess, G., ElBadawey, M. R., et al. (2013). Efficacy of a marine bacterial nuclease against biofilm forming microorganisms isolated from chronic rhinosinusitis. PLoS ONE, 8, e55339. https://doi.org/10.1371/journal.pone.0055339.
Shrivastava, P., Jain, T., & Trivedi, V. B. (2016). DNA fingerprinting: A substantial and imperative aid to forensic investigation. European Journal of Forensic Science, 3, 23–30.
Skinner-Adams, T. S., Stack, C. M., Trenholme, K. R., Brown, C. L., Grembecka, J., Lowther, J., et al. (2010). Plasmodium falciparum neutral aminopeptidases: New targets for antimalarials. Trends in Biochemial Sciences, 35, 53–61.
Slots, J., & Slots, H. (2000). Bacterial and viral pathogens in saliva: Disease relationship and infectious risk. Periodontology, 55, 48–69.
Szostak-Kotowa, J. (2004). Biodeterioration of textiles. International Biodeterioration and Biodegradation, 53, 165–170.
Tamariz, J., Voynarovska, K., Prinz, M., & Caragine, T. (2006). The application of ultraviolet irradiation to exogenous source of DNA in plasticware and water for the amplification of low copy number DNA. Journal of Forensic Science, 51, 790–794.
Taoukis, P., Breene, W., & Labuza, T. P. (1988). Intermediate moisture foods. Advances in Cereal Science and Technology, 9, 91–128.
Tiwari, M. (2011). Science behind human saliva. Journal of Natural Science, Biology and Medicine, 2, 53–58.
Tridico, S. R., Murray, D. C., Addison, J., Kirkbride, K. P., & Bunce, M. (2014). Metagenomic analyses of bacteria on human hairs: A qualitative assessment for applications in forensic science. Investigative Genetics. https://doi.org/10.1186/s13323-014-0016-5.
Tropeano, M., Vázquez, S., Coria, S., Turjanski, A., Cicero, D., Bercovich, A., et al. (2013). Extracellular hydrolytic enzyme production by proteolytic bacteria from the Antarctic. Polish Polar Research. https://doi.org/10.2478/popore-2013-0014.
Tuli, H. S., Chaudhary, P., Beniwal, V., & Sharma, A. K. (2015). Microbial pigments as natural color sources: Current trends and future perspectives. Journal of Food Science and Technology, 52, 4669–4678.
Ungria, M. C. A. D. (2003). Forensic DNA analysis in criminal investigations. Philippine Journal of Science, 132, 13–19.
van Belkum, A., Scherer, S., van Alphen, L., & Verbrugh, H. (1998). Short-sequence DNA repeats in prokaryotic genomes. Microbiology and Molecular Biology Reviews, 62, 275–293.
van Oorschot, R. A. H., Ballantyne, K. N., & Mitchell, R. J. (2010). Forensic trace DNA: A review. Investigative Genetics, 1, 14.
Vanek, D., Saskova, L., Votrubova, J., & Emmerova, B. (2015). Factors influencing the reliability of DNA typing results for bone samples. Forensic Science International: Genetics Supplement Series, 5, e667–e668.
Varsha, (2006). DNA fingerprinting in the criminal justice system: An overview. DNA and Cell Biology, 25, 181–188.
Vuichard, S., Borer, U., Bottinelli, M., Cossu, C., Malik, N., Meier, V., et al. (2011). Differential DNA extraction of challenging simulated sexual-assault samples: A Swiss collaborative study. Investigative Genetics. https://doi.org/10.1186/2041-2223-2-11.
Wain, J., Bay, P. V. B., Vinh, H., Duong, N. M., Diep, T. S., Walsh, A. L., et al. (2001). Quantitation of bacteria in bone marrow from patients with typhoid fever: Relationship between counts and clinical features. Journal of Clinical Microbiology, 39, 1571–1576.
Wen, Q., Chen, Z., Zhao, Y., Zhang, H., & Feng, Y. (2010). Biodegradation of polyacrylamide by bacteria isolated from activated sludge and oil-contaminated soil. Journal of Hazardous Materials, 175, 955–959.
Wickström, C., Herzberg, M. C., Beighton, D., & Svensäter, G. (2009). Proteolytic degradation of human salivary MUC5B by dental biofilms. Microbiology, 155, 2866–2872.
Wilson, M. L., & Weinstein, M. P. (1994). General principles in the laboratory detection of bacteremia and fungemia. Clinics in Laboratory Medicine, 14, 69–82.
Wu, Y., Ackerman, J. L., Chesler, D. A., Graham, L., Wang, Y., & Glimcher, M. J. (2003). Density of organic matrix of native mineralized bone measured by water and fat-suppressed proton projection MRI. Magnetic Resonance in Medicine, 50, 59–68.
Wurmb-Schwark, N., Heinrich, A., Freudenberg, M., Gebuhr, M., & Schwark, T. (2008). The impact of DNA contamination of bone samples in forensic case analysis and anthropological research. Legal Medicine, 10, 125–130.
Yang, C., Liu, Z., Tian, M., Xu, P., Li, B., Yang, Q., et al. (2016). Relationship between serum albumin levels and infections in newborn late preterm infants. Medical Science Monitor, 22, 92–98.
Yeap, S. S., Beaumont, M., Bennett, A., Keating, N. A., White, D. A., & Hosking, D. J. (1998). Genetic and environmental factors affecting bone mineral density in large families. Postgraduate Medical Journal, 74, 349–354.
Yu, F., Fu, R., Xie, Y., & Chen, W. (2015). Isolation and characterization of polyacrylamide-degrading bacteria from dewatered sludge. International Journal of Environmental Research and Public Health, 12, 4214–4230.
Zupanič Pajnič, I. (2016). Extraction of DNA from human skeletal material. In W. Goodwin (Ed.), Forensic DNA typing protocols 1420 (2nd ed.). New York: Springer. https://doi.org/10.1007/978-1-4939-3597-0_7.
Zupanič Pajnič, I., Gornjak Pogorelc, B., & Balažic, J. (2010). Molecular genetic identification of skeletal remains from the Second World War Konfin I mass grave in Slovenia. International Journal of Legal Medicine, 124, 307–317.
Zupanič Pajnič, I., Petaros, A., Balažic, J., & Geršak, K. (2016). Searching for the mother missed since the Second World War. Journal of Forensic and Legal Medicine, 44, 138–142.
Zupanič Pajniča, I., Debska, M., Pogorelc, B. G., Mohorčič, B. G., Balažic, J., Zupanc, T., et al. (2016). Highly efficient automated extraction of DNA from old and contemporary skeletal remains. Journal of Forensic and Legal Medicine, 37, 78–86.
Zurick, K. M., Qin, C., & Bernards, M. T. (2013). Mineralization induction effects of osteopontin, bone sialoprotein and dentin phosphoprotein on a biomimetic collagen substrate. Journal of Biomedical and Materials Research A, 101, 1571–1581.
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Dash, H.R., Das, S. Microbial Degradation of Forensic Samples of Biological Origin: Potential Threat to Human DNA Typing. Mol Biotechnol 60, 141–153 (2018). https://doi.org/10.1007/s12033-017-0052-5
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DOI: https://doi.org/10.1007/s12033-017-0052-5