Skip to main content

Advertisement

Log in

Prognostic value of mutational characteristics in gastrointestinal stromal tumors: a single-center experience in 275 cases

  • Original Paper
  • Published:
Medical Oncology Aims and scope Submit manuscript

Abstract

The objective of this study was to investigate the impact of KIT/PDGFRA mutations on the prognosis of gastrointestinal stromal tumors (GISTs). In the present study, genotype analyses were performed based on GIST samples from 275 patients. The relationship between mutation and clinicopathological characteristics were explored. All factors were evaluated for their impacts on relapse-free survival (RFS). Briefly, the results of genotype analyses showed that mutations were identified in 258 (93.8 %) patients, and deletion was the most frequent type of mutation accounting for 47.3 % (122/258) of all mutation cases, followed by substitution (87/258, 33.7 %) and duplication (49/258, 19.0 %). Moreover, for KIT exon 11 mutation, the most frequently involved area was from codon 557 to 560. Deep analyses showed that the mutation types were correlated with tumor location (P = 0.005), tumor size (P = 0.022), mitosis rate (P < 0.001), risk grade (P < 0.001), and relapse (P = 0.004). Furthermore, delW557-K558 correlated with mitosis rate (P = 0.042) and relapse (P = 0.036), and delTyr568/570 correlated with tumor origin (P = 0.018). Most importantly, mitotic rate [HR = 2.901 (95 % CI 1.094–7.695), P = 0.032] and risk grade [HR = 9.629 (95 % CI 1.997–46.416), P = 0.005] would be the representative traditional prognostic factors, and deletion with >3 codons would be an novel independent predictor of poor outcome for RFS in GIST patients with deletion mutation of KIT exon 11 [HR = 7.970 (95 % CI 1.774–35.803), P = 0.007]. All results indicated that mutation determined clinicopathological features and prognosis of GISTs, and more than three codons involvement may be a novel adverse indicator.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  1. ESMO/European Sarcoma Network Working Group. Gastrointestinal stromal tumors: ESMO clinical practice guidelines for diagnosis, treatment and follow-up. Ann Oncol. 2012;23(Suppl 7):vii49–55. doi:10.1093/annonc/mds252.

    Google Scholar 

  2. Paral J, Slaninka I, Kalabova H, Hadzi-Nikolov D. Gastrointestinal stromal tumors: review on morphology, molecular pathology, diagnostics, prognosis and treatment options. Acta Gastro-Enterologica Belgica. 2010;73(3):349–59.

    CAS  PubMed  Google Scholar 

  3. Corless CL, Barnett CM, Heinrich MC. Gastrointestinal stromal tumours: origin and molecular oncology. Nat Rev Cancer. 2011;11(12):865–78. doi:10.1038/nrc3143.

    CAS  PubMed  Google Scholar 

  4. Joensuu H, Eriksson M, Hall KS, Hartmann JT, Pink D, Schutte J, et al. One vs three years of adjuvant imatinib for operable gastrointestinal stromal tumor a randomized trial. JAMA. 2012;307(12):1265–72.

    Article  CAS  PubMed  Google Scholar 

  5. Delahaye NF, Rusakiewicz S, Martins I, Menard C, Roux S, Lyonnet L, et al. Alternatively spliced NKp30 isoforms affect the prognosis of gastrointestinal stromal tumors. Nat Med. 2011;17(6):700. doi:10.1038/nm.2366.

    Article  CAS  PubMed  Google Scholar 

  6. Joensuu H, Vehtari A, Riihimaki J, Nishida T, Steigen SE, Brabec P, et al. Risk of recurrence of gastrointestinal stromal tumour after surgery: an analysis of pooled population-based cohorts. Lancet Oncol. 2012;13(3):265–74. doi:10.1016/S1470-2045(11)70299-6.

    Article  PubMed  Google Scholar 

  7. Rubin BP, Heinrich MC, Corless CL. Gastrointestinal stromal tumour. Lancet. 2007;369(9574):1731–41. doi:10.1016/S0140-6736(07)60780-6.

    Article  CAS  PubMed  Google Scholar 

  8. Demetri GD, van Oosterom AT, Garrett CR, Blackstein ME, Shah MH, Verweij J, et al. Efficacy and safety of sunitinib in patients with advanced gastrointestinal stromal tumour after failure of imatinib: a randomised controlled trial. Lancet. 2006;368(9544):1329–38. doi:10.1016/s0140-6736(06)69446-4.

    Article  CAS  PubMed  Google Scholar 

  9. Eisenberg BL, Harris J, Blanke CD, Demetri GD, Heinrich MC, Watson JC, et al. Phase II trial of neoadjuvant/adjuvant imatinib mesylate (IM) for advanced primary and metastatic/recurrent operable gastrointestinal stromal tumor (GIST): early results of RTOG 0132/ACRIN 6665. J Surg Oncol. 2009;99(1):42–7. doi:10.1002/jso.21160.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  10. Joensuu H. Risk stratification of patients diagnosed with gastrointestinal stromal tumor. Hum Pathol. 2008;39(10):1411–9. doi:10.1016/j.humpath.2008.06.025.

    Article  PubMed  Google Scholar 

  11. Demetri GD, von Mehren M, Antonescu CR, DeMatteo RP, Ganjoo KN, Maki RG, et al. NCCN task force report: update on the management of patients with gastrointestinal stromal tumors. J Natl Compr Cancer Netw. 2010;8:S1–43.

    CAS  Google Scholar 

  12. Dematteo RP, Gold JS, Saran L, Gonen M, Liau KH, Maki RG, et al. Tumor mitotic rate, size, and location independently predict recurrence after resection of primary gastrointestinal stromal tumor (GIST). Cancer. 2008;112(3):608–15. doi:10.1002/cncr.23199.

    Article  PubMed  Google Scholar 

  13. Cerski MR, Pereira F, Matte US, Oliveira FH, Crusius FL, Waengertner LE, et al. Exon 11 mutations, Ki67, and p16(INK4A) as predictors of prognosis in patients with GIST. Pathol Res Pract. 2011;207(11):701–6. doi:10.1016/j.prp.2011.09.008.

    Article  CAS  PubMed  Google Scholar 

  14. Arne G, Kristiansson E, Nerman O, Kindblom LG, Ahlman H, Nilsson B, et al. Expression profiling of GIST: CD133 is associated with KIT exon 11 mutations, gastric location and poor prognosis. Int J Cancer. 2011;129(5):1149–61. doi:10.1002/ijc.25755.

    Article  CAS  PubMed  Google Scholar 

  15. Bachet JB, Landi B, Laurent-Puig P, Italiano A, Le Cesne A, Levy P, et al. Diagnosis, prognosis and treatment of patients with gastrointestinal stromal tumour (GIST) and germline mutation of KIT exon 13. Eur J Cancer. 2013;. doi:10.1016/j.ejca.2013.04.005.

    Google Scholar 

  16. Lv A, Li Z, Tian X, Guan X, Zhao M, Dong B, et al. SKP2 high expression, KIT exon 11 deletions, and gastrointestinal bleeding as predictors of poor prognosis in primary gastrointestinal stromal tumors. PLoS ONE. 2013;8(5):e62951. doi:10.1371/journal.pone.0062951.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  17. Parkin B, Chugh R. Molecular pathology of gastrointestinal stromal tumors and implications for treatment and prognosis. Curr Probl Cancer. 2011;35(5):245–54. doi:10.1016/j.currproblcancer.2011.10.002.

    Article  PubMed  Google Scholar 

  18. Roskoski R Jr. Structure and regulation of Kit protein-tyrosine kinase—the stem cell factor receptor. Biochem Biophys Res Commun. 2005;338(3):1307–15. doi:10.1016/j.bbrc.2005.09.150.

    Article  CAS  PubMed  Google Scholar 

  19. Bachet JB, Hostein I, Le Cesne A, Brahimi S, Beauchet A, Tabone-Eglinger S, et al. Prognosis and predictive value of KIT exon 11 deletion in GISTs. Br J Cancer. 2009;101(1):7–11. doi:10.1038/sj.bjc.6605117.

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  20. Fletcher CD, Berman JJ, Corless C, Gorstein F, Lasota J, Longley BJ, et al. Diagnosis of gastrointestinal stromal tumors: a consensus approach. Hum pathol. 2002;33(5):459–65.

    Article  PubMed  Google Scholar 

  21. Demetri GD, Benjamin RS, Blanke CD, Blay JY, Casali P, Choi H, et al. NCCN Task Force report: management of patients with gastrointestinal stromal tumor (GIST)–update of the NCCN clinical practice guidelines. J Natl Compr Cancer Netw. 2007;5(Suppl 2):S1–29 quiz S30.

    Google Scholar 

  22. Minarik G, Plank L, Lasabova Z, Szemes T, Burjanivova T, Szepe P, et al. Spectrum of mutations in gastrointestinal stromal tumor patients: a population-based study from Slovakia. APMIS. 2013;121(6):539–48. doi:10.1111/apm.12019.

    Article  CAS  PubMed  Google Scholar 

  23. Wozniak A, Rutkowski P, Piskorz A, Ciwoniuk M, Osuch C, Bylina E, et al. Prognostic value of KIT/PDGFRA mutations in gastrointestinal stromal tumours (GIST): Polish Clinical GIST registry experience. Ann Oncol. 2012;23(2):353–60. doi:10.1093/annonc/mdr127.

    Article  CAS  PubMed  Google Scholar 

  24. Origone P, Gargiulo S, Mastracci L, Ballestrero A, Battistuzzi L, Casella C, et al. Molecular characterization of an Italian series of sporadic GISTs. Gastric Cancer. 2013;16(4):596–601. doi:10.1007/s10120-012-0213-y.

    Article  CAS  PubMed  Google Scholar 

  25. Baker G, Babb C, Schnugh D, Nayler S, Louw M, Goedhals J, et al. Molecular characterisation of gastrointestinal stromal tumours in a South African population. Oncol lett. 2013;5(1):155–60. doi:10.3892/ol 2012.1013.

    CAS  PubMed Central  PubMed  Google Scholar 

  26. Braggio E, Braggio Dde A, Small IA, Lopes LF, Valadao M, Gouveia ME, et al. Prognostic relevance of KIT and PDGFRA mutations in gastrointestinal stromal tumors. Anticancer Res. 2010;30(6):2407–14.

    CAS  PubMed  Google Scholar 

  27. Corless CL, Fletcher JA, Heinrich MC. Biology of gastrointestinal stromal tumors. J Clin Oncol. 2004;22(18):3813–25. doi:10.1200/JCO.2004.05.140.

    Article  CAS  PubMed  Google Scholar 

  28. Laurini JA, Carter JE. Gastrointestinal stromal tumors: a review of the literature. Arch Pathol Lab Med. 2010;134(1):134–41. doi:10.1043/2008-0083-RSR2.1.

    PubMed  Google Scholar 

  29. Emile JF, Theou N, Tabone S, Cortez A, Terrier P, Chaumette MT, et al. Clinicopathologic, phenotypic, and genotypic characteristics of gastrointestinal mesenchymal tumors. Clin Gastroenterol Hepatol. 2004;2(7):597–605.

    Article  PubMed  Google Scholar 

  30. Kim TW, Lee H, Kang YK, Choe MS, Ryu MH, Chang HM, et al. Prognostic significance of c-kit mutation in localized gastrointestinal stromal tumors. Clin Cancer Res. 2004;10(9):3076–81.

    Article  CAS  PubMed  Google Scholar 

  31. Hou YY, Grabellus F, Weber F, Zhou Y, Tan YS, Li J, et al. Impact of KIT and PDGFRA gene mutations on prognosis of patients with gastrointestinal stromal tumors after complete primary tumor resection. J Gastrointes Surg. 2009;13(9):1583–92. doi:10.1007/s11605-009-0842-6.

    Article  Google Scholar 

  32. Andersson J, Bumming P, Meis-Kindblom JM, Sihto H, Nupponen N, Joensuu H, et al. Gastrointestinal stromal tumors with KIT exon 11 deletions are associated with poor prognosis. Gastroenterology. 2006;130(6):1573–81. doi:10.1053/j.gastro.2006.01.043.

    Article  CAS  PubMed  Google Scholar 

  33. Miettinen M, Sobin LH, Lasota J. Gastrointestinal stromal tumors of the stomach: a clinicopathologic, immunohistochemical, and molecular genetic study of 1765 cases with long-term follow-up. Am J Surg Pathol. 2005;29(1):52–68.

    Article  PubMed  Google Scholar 

  34. Wardelmann E, Losen I, Hans V, Neidt I, Speidel N, Bierhoff E, et al. Deletion of Trp-557 and Lys-558 in the juxtamembrane domain of the c-kit protooncogene is associated with metastatic behavior of gastrointestinal stromal tumors. Int J Cancer. 2003;106(6):887–95. doi:10.1002/ijc.11323.

    Article  CAS  PubMed  Google Scholar 

  35. Martin J, Poveda A, Llombart-Bosch A, Ramos R, Lopez-Guerrero JA, Garcia del Muro J, et al. Deletions affecting codons 557–558 of the c-KIT gene indicate a poor prognosis in patients with completely resected gastrointestinal stromal tumors: a study by the Spanish Group for Sarcoma Research (GEIS). J Clin Oncol. 2005;23(25):6190–8. doi:10.1200/JCO.2005.19.554.

    Article  CAS  PubMed  Google Scholar 

  36. Martin-Broto J, Gutierrez A, Garcia-del-Muro X, Lopez-Guerrero JA, Martinez-Trufero J, de Sande LM, et al. Prognostic time dependence of deletions affecting codons 557 and/or 558 of KIT gene for relapse-free survival (RFS) in localized GIST: a Spanish Group for Sarcoma Research (GEIS) Study. Ann Oncol. 2010;21(7):1552–7. doi:10.1093/annonc/mdq047.

    Article  CAS  PubMed  Google Scholar 

  37. Debiec-Rychter M, Dumez H, Judson I, Wasag B, Verweij J, Brown M, et al. Use of c-KIT/PDGFRA mutational analysis to predict the clinical response to imatinib in patients with advanced gastrointestinal stromal tumours entered on phase I and II studies of the EORTC Soft Tissue and Bone Sarcoma Group. Eur J Cancer. 2004;40(5):689–95. doi:10.1016/j.ejca.2003.11.025.

    Article  CAS  PubMed  Google Scholar 

  38. Debiec-Rychter M, Sciot R, Le Cesne A, Schlemmer M, Hohenberger P, van Oosterom AT, et al. KIT mutations and dose selection for imatinib in patients with advanced gastrointestinal stromal tumours. Eur J Cancer. 2006;42(8):1093–103. doi:10.1016/j.ejca.2006.01.030.

    Article  CAS  PubMed  Google Scholar 

  39. Penzel R, Aulmann S, Moock M, Schwarzbach M, Rieker RJ, Mechtersheimer G. The location of KIT and PDGFRA gene mutations in gastrointestinal stromal tumours is site and phenotype associated. J Clin Pathol. 2005;58(6):634–9. doi:10.1136/jcp.2004.021766.

    Article  CAS  PubMed  Google Scholar 

  40. Emile JF, Tabone-Eglinger S, Theou-Anton N, Lemoine A. Prognostic value of KIT exon 11 deletions in GISTs. Gastroenterology. 2006;131(3):976–7. doi:10.1053/j.gastro.2006.07.042 author reply 7–8.

    Article  PubMed  Google Scholar 

Download references

Acknowledgments

This study was supported by the grant of (1) National Science Foundation of China (No. 81272743) and (2) Projects of Shanghai Committee of Science and Technology (Nos. 11411950800 and 13XD1402500).

Conflict of interest

None.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hui Cao.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, M., Xu, J., Zhao, W. et al. Prognostic value of mutational characteristics in gastrointestinal stromal tumors: a single-center experience in 275 cases. Med Oncol 31, 819 (2014). https://doi.org/10.1007/s12032-013-0819-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s12032-013-0819-x

Keywords

Navigation