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An α-Glucuronidase Enzyme Activity Assay Adaptable for Solid Phase Screening

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Abstract

Glucuronic acid is a common chemical moiety that decorates the xylan polymer of hemicellulose. This chemical substituent impairs both enzymatic and acidic hydrolysis of xylosidic bonds. The α-glucuronidase enzyme hydrolyzes the 1,2-linked glucuronic acid from the terminal, non-reducing xylose of xylo-oligosaccharides. There are relatively few α-glucuronidase genes in the public databases. We have developed an assay with commercially available reagents that can be used to search DNA libraries for α-glucuronidase genes in a high-throughput, solid phase activity screen.

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References

  1. Bhat, M. K. (2000). Biotechnology Advances, 18, 355–383. doi:10.1016/S0734-9750(00)00041-0.

    Article  CAS  Google Scholar 

  2. Ohmiya, K., Sakka, K., Karita, S., & Kimura, T. (1997). Biotechnology & Genetic Engineering Reviews, 14, 365–414.

    CAS  Google Scholar 

  3. Somerville, C., Bauer, S., Brininstool, G., Facette, M., Hamann, T., & Milne, J. (2004). Science, 306, 2206–2211. doi:10.1126/science.1102765.

    Article  CAS  Google Scholar 

  4. Ward, O. P., & Moo-Young, M. (1989). Critical Reviews in Biotechnology, 8, 237–274. doi:10.3109/07388558909148194.

    Article  CAS  Google Scholar 

  5. Saha, B. C., & Bothast, R. J. (1999). In S. H., Imam, R. V., Greene, B. R., & Zaidi (Eds.), Biopolymers pp. 167–194. Washington, DC: American Chemical Society.

    Google Scholar 

  6. Biely, P., MacKenzie, C. R., Puls, J., & Schneider, H. (1986). Bio/Technology, 4, 731–733. doi:10.1038/nbt0886-731.

    Article  CAS  Google Scholar 

  7. Bajpai, P. (1997). Advances in Applied Microbiology, 43, 141–194. doi:10.1016/S0065-2164(08)70225-9.

    Article  CAS  Google Scholar 

  8. Poutanen, K., Tenkanen, M., Korte, H., & Puls, J. (1991). In G. F., Leatham, M. E., & Himmel (Eds.), Enzymes in biomass conversion pp. 426–436. Washington, DC: American Chemical Society.

    Google Scholar 

  9. Timell, T. E. (1964). Advances in Carbohydrate Chemistry, 19, 247–302.

    CAS  Google Scholar 

  10. Timell, T. E. (1965). Advances in Carbohydrate Chemistry, 20, 409–483.

    CAS  Google Scholar 

  11. Wilkie, K. C. B. (1979). Advances in Carbohydrate Chemistry and Biochemistry, 36, 215–264. doi:10.1016/S0065-2318(08)60237-1.

    Article  CAS  Google Scholar 

  12. Wong, D. W. (2006). Applied Biochemistry and Biotechnology, 133, 87–112. doi:10.1385/ABAB:133:2:87.

    Article  CAS  Google Scholar 

  13. Roy, N., & Timell, T. E. (1968). Carbohydrate Research, 6, 482–487. doi:10.1016/S0008-6215(00)81244-6.

    Article  CAS  Google Scholar 

  14. Das, N. N., Das, S. C., Dutt, A. S., & Roy, A. (1981). Carbohydrate Research, 94, 73–82. doi:10.1016/S0008-6215(00)85597-4.

    Article  CAS  Google Scholar 

  15. Das, N. N., Das, S. C., & Mukherjee, A. K. (1984). Carbohydrate Research, 127, 345–348. doi:10.1016/0008-6215(84)85369-0.

    Article  CAS  Google Scholar 

  16. Takahashi, N., & Koshijima, T. (1988). Wood Science and Technology, 22, 231–241. doi:10.1007/BF00386018.

    Article  CAS  Google Scholar 

  17. de Wet, B. J. M., & Prior, B. A. (2004). In B. C., Saha, K., & Hayashi (Eds.), Lignocellulose biodegradation pp. 241–254. Washington, DC: American Chemical Society.

    Google Scholar 

  18. Biely, P., de Vries, R. P., Vrsanska, M., & Visser, J. (2000). Biochimica et Biophysica Acta, 1474, 360–364.

    CAS  Google Scholar 

  19. Nagy, T., Emami, K., Fontes, C. M., Ferreira, L. M., Humphry, D. R., & Gilbert, H. J. (2002). Journal of Bacteriology, 184, 4925–4929. doi:10.1128/JB.184.17.4925-4929.2002.

    Article  CAS  Google Scholar 

  20. de Wet, B. J. M., van Zyl, W. H., & Prior, B. A. (2006). Enzyme and Microbial Technology, 38, 649–656. doi:10.1016/j.enzmictec.2005.07.018.

    Article  Google Scholar 

  21. Zaide, G., Shallom, D., Shulami, S., Zolotnitsky, G., Golan, G., & Baasov, T. (2001). European Journal of Biochemistry, 268, 3006–3016. doi:10.1046/j.1432-1327.2001.02193.x.

    Article  CAS  Google Scholar 

  22. Tenkanen, M., & Siika-aho, M. (2000). Journal of Biotechnology, 78, 149–161. doi:10.1016/S0168-1656(99)00240-0.

    Article  CAS  Google Scholar 

  23. Khandke, K. M., Vithayathil, P. J., & Murthy, S. K. (1989). Archives of Biochemistry and Biophysics, 274, 511–517. doi:10.1016/0003-9861(89)90464-5.

    Article  CAS  Google Scholar 

  24. Johnson, K. G., Silva, M. C., MacKenzie, C. R., Schneider, H., & Fontana, J. D. (1989). Applied Biochemistry and Biotechnology, 20–21, 245–258. doi:10.1007/BF02936486.

    Article  Google Scholar 

  25. Mierzwa, M., Tokarzewska-Zadora, J., Deptula, T., Rogalski, J., & Szczodrak, J. (2005). Preparative Biochemistry & Biotechnology, 35, 243–256. doi:10.1081/PB-200065648.

    Article  CAS  Google Scholar 

  26. Siika-aho, M., Tenkanen, M., Buchert, J., Puls, J., & Viikari, L. (1994). Enzyme and Microbial Technology, 16, 813–819. doi:10.1016/0141-0229(94)90041-8.

    Article  CAS  Google Scholar 

  27. de Vries, R. P., Kester, H. C., Poulsen, C. H., Benen, J. A., & Visser, J. (2000). Carbohydrate Research, 327, 401–410. doi:10.1016/S0008-6215(00)00066-5.

    Article  Google Scholar 

  28. Wagschal, K., Franqui-Espiet, D., Lee, C. C., Robertson, G. H., & Wong, D. W. (2005). Applied and Environmental Microbiology, 71, 5318–5323. doi:10.1128/AEM.71.9.5318-5323.2005.

    Article  CAS  Google Scholar 

  29. Shulami, S., Gat, O., Sonenshein, A. L., & Shoham, Y. (1999). Journal of Bacteriology, 181, 3695–3704.

    CAS  Google Scholar 

  30. Suzuki, T., Kitagawa, E., Sakakibara, F., Ibata, K., Usui, K., & Kawai, K. (2001). Bioscience, Biotechnology, and Biochemistry, 65, 487–494. doi:10.1271/bbb.65.487.

    Article  CAS  Google Scholar 

  31. de Vries, R. P., Poulsen, C. H., Madrid, S., & Visser, J. (1998). Journal of Bacteriology, 180, 243–249.

    Google Scholar 

  32. Margolles-Clark, E., Saloheimo, M., Siika-aho, M., & Penttila, M. (1996). Gene, 172, 171–172. doi:10.1016/0378-1119(96)00167-9.

    Article  CAS  Google Scholar 

  33. Ruile, P., Winterhalter, C., & Liebl, W. (1997). Molecular Microbiology, 23, 267–279. doi:10.1046/j.1365-2958.1997.2011568.x.

    Article  CAS  Google Scholar 

  34. Milner, Y., & Avigad, G. (1967). Carbohydrate Research, 4, 359–361. doi:10.1016/S0008-6215(00)80191-3.

    Article  CAS  Google Scholar 

  35. Castanares, A., Hay, A. J., Gordon, A. H., McCrae, S. I., & Wood, T. M. (1995). Journal of Biotechnology, 43, 183–194. doi:10.1016/0168-1656(95)00128-X.

    Article  CAS  Google Scholar 

  36. Wood, T. M., & Wilson, C. A. (1995). Applied Microbiology and Biotechnology, 43, 893–900. doi:10.1007/BF02431925.

    Article  CAS  Google Scholar 

  37. Biely, P., Hirsch, J., la Grange, D. C., van Zyl, W. H., & Prior, B. A. (2000). Analytical Biochemistry, 286, 289–294. doi:10.1006/abio.2000.4810.

    Article  CAS  Google Scholar 

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Correspondence to Charles C. Lee.

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Reference to a company and/or products is only for purposes of information and does not imply approval or recommendation of the product to the exclusion of others which may also be suitable. All programs and services of the U.S. Department of Agriculture are offered on a non-discriminatory basis without regard to race, color, national origin, religion, sex, age, marital status, or handicap.

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Lee, C.C., Wagschal, K., Kibblewhite-Accinelli, R.E. et al. An α-Glucuronidase Enzyme Activity Assay Adaptable for Solid Phase Screening. Appl Biochem Biotechnol 155, 11–17 (2009). https://doi.org/10.1007/s12010-008-8408-8

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  • DOI: https://doi.org/10.1007/s12010-008-8408-8

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