Skip to main content
Log in

Origin and future distribution of the new A (H1N1) influenza virus emerging in North America in 2009

  • Special Topic/Brief Communication/Molecular Evolution
  • Published:
Chinese Science Bulletin

Abstract

The origin of the new A (H1N1) influenza virus recently emerging in North America is a hot controversial topic of significance in disease control and risk assessment. Some experts claimed that it was an unusually mongrelized mix of human, avian and swine influenza viruses, while some others concluded that it was totally a simple re-assortment hybrid of two lineages of swine influenza viruses. Here the phylogenetic diversity of the viral PB1, PA and PB2 gene sequences using online web servers, and the results suggest that all the 8 genetic segments of the new virus were possibly from two lineages of swine influenza viruses, and one of the lineage was a mongrelized mix of human, avian and swine influenza viruses emerging in the world approximately 10 years ago. Considering the recent epidemiological trends of the new virus, we believe it will spread more widely in the world and persist long in human populations. It also could spread among swine populations. The future wide spreading of the new virus may coincide the disappearance of a subtype of previous human influenza A virus.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  1. Centers for Disease Control. Swine influenza A (H1N1) infection in two children-Southern California, March–April 2009. Morbidity and Mortality Weekly Report, 2009, 58: 400–402

    Google Scholar 

  2. Situation updates — Influenza A (H1N1). World Health Organization, 2009-05-17. http://www.who.int/csr/disease/swineflu/updates/en/index.html.

  3. Rabadan R. Influenza A (H1N1) swine flu-worldwide (04), ProMED-mail, 2009. Archive Number, 20090506.1695

  4. Chen J. Influenza A (H1N1) swine flu-worldwide (13), ProMED-mail, 2009. Archive Number, 20090428.1601

  5. Webster R G, Bean W J, Gorman O T, et al. Evolution and ecology of influenza A viruses. Microbiol Rev, 1992, 56: 152–179

    Google Scholar 

  6. Liu S, Ji K, Chen J, et al. Panorama phylogenetic diversity and distribution of type A influenza virus. PLoS ONE, 2009, 4: e5022

    Article  Google Scholar 

  7. Novel Swine-Origin Influenza A (H1N1) Virus Investigation Team. Emergence of a novel swine-origin influenza a (H1N1) virus in humans. N Engl J Med, 2009, doi: 10.1056/NEJMoa0903810

  8. Bao Y, Bolotov P, Dernovoy D, et al. The influenza virus resource at the national center for biotechnology information. J Virol, 2008, 82: 596–601

    Article  Google Scholar 

  9. Li W. Molecular Evolution. 1st ed. Cold Spring Harbor: Sunderland: Sinauer Associates, 1997

    Google Scholar 

  10. Kawaoka Y, Krauss S, Webster R G. Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics. J Virol, 1989, 63: 4603–4608

    Google Scholar 

  11. Olsen C W. The emergence of novel swine influenza viruses in North America. Virus Res, 2002, 85: 199–210

    Article  Google Scholar 

  12. Shinde V, Bridges C B, Uyeki T M, et al. Triple-reassortant swine influenza A (H1) in humans in the United States, 2005–2009. N Engl J Med, 2009, doi: 10.1056/NEJMoa0903812

  13. Hoffmann E, Neumann G, Kawaoka Y, et al. A DNA transfection system for generation of influenza A virus from eight plasmids. Proc Natl Acad Sci USA, 2000, 97: 6108–6113

    Article  Google Scholar 

  14. Boelle P, Bernillon P, Desenclos J. A preliminary estimation of the reproduction ratio for new influenza A (H1N1) from the outbreak in Mexico, March–April 2009. Euro Surveill, 2009, 14: 19205

    Google Scholar 

  15. Assessing the severity of an influenza pandemic. World health Organization, 2009-05-17. http://www.who.int/csr/disease/swineflu/assess/disease_swineflu_assess_20090511/en/index.html.

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to JiMing Chen.

About this article

Cite this article

Chen, J., Sun, Y., Liu, S. et al. Origin and future distribution of the new A (H1N1) influenza virus emerging in North America in 2009. Chin. Sci. Bull. 54, 2174–2178 (2009). https://doi.org/10.1007/s11434-009-0430-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11434-009-0430-x

Keywords

Navigation