Skip to main content

Advertisement

Log in

Analysis of admixture and genetic structure of two Native American groups of Southern Argentinean Patagonia

  • Published:
Molecular Biology Reports Aims and scope Submit manuscript

Abstract

Argentinean Patagonia is inhabited by people that live principally in urban areas and by small isolated groups of individuals that belong to indigenous aboriginal groups; this territory exhibits the lowest population density of the country. Mapuche and Tehuelche (Mapudungun linguistic branch), are the only extant Native American groups that inhabit the Argentinean Patagonian provinces of Río Negro and Chubut. Fifteen autosomal STRs, 17 Y-STRs, mtDNA full length control region sequence and two sets of Y and mtDNA-coding region SNPs were analyzed in a set of 434 unrelated individuals. The sample set included two aboriginal groups, a group of individuals whose family name included Native American linguistic root and urban samples from Chubut, Río Negro and Buenos Aires provinces of Argentina. Specific Y Amerindian haplogroup Q1 was found in 87.5 % in Mapuche and 58.82 % in Tehuelche, while the Amerindian mtDNA haplogroups were present in all the aboriginal sample contributors investigated. Admixture analysis performed by means of autosomal and Y-STRs showed the highest degree of admixture in individuals carrying Mapuche surnames, followed by urban populations, and finally by isolated Native American populations as less degree of admixture. The study provided novel genetic information about the Mapuche and Tehuelche people and allowed us to establish a genetic correlation among individuals with Mapudungun surnames that demonstrates not only a linguistic but also a genetic relationship to the isolated aboriginal communities, representing a suitable proxy indicator for assessing genealogical background.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  1. Corach D, Marino M, Sala A (2006) Relevant genetic contribution of Amerindian to the extant population of Argentina. Prog Forensic Genet 11(1288):397–399

    Google Scholar 

  2. Corach D, Lao O, Bobillo MC, van Der Gaag K, Zuniga S, Vermeulen M, van Duijn K, Goedbloed M, Vallone PM, Parson W, deKnijff P, Kayser M (2010) Inferring continental ancestry of Argentineans from autosomal, Y-chromosomal and mitochondrial DNA. Ann Hum Genet 74:65–76

    Article  CAS  PubMed  Google Scholar 

  3. Avena S, Via M, Ziv E, Perez-Stable EJ, Gignoux CR, Dejean C, Huntsman S, Torres-Mejia G, Dutil J, Matta JL, Beckman K, Burchard EG, Parolin ML, Goicoechea A, Acreche N, Boquet M, Rios Part Mdel C, Fernandez V, Rey J, Stern MC, Carnese RF, Fejerman L (2012) Heterogeneity in genetic admixture across different regions of Argentina. PLoS ONE 7(4):e34695

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  4. Martinez Sarasola C (2005) Nuestros paisanos los indios. EmecéEdts, Buenos Aires

    Google Scholar 

  5. Dana LP (2006) Indigenous peoples in Chile. Int J Entrepreneurship Small Bus 3:779–786

    Article  Google Scholar 

  6. García F, Moraga M, Vera S, Henríquez H, Llop E, Aspillaga E, Rothhammer F (2006) mtDNA microevolution in Southern Chile’s archipelagos. Am J Phys Anthropol 129:473–481

    Article  PubMed  Google Scholar 

  7. Loukotka C (1968) Classification of South American Indian languages. Latin American Studies Center, University of California Press, Berkeley

    Google Scholar 

  8. Greenberg JH, Turner CG, Zegura SL, Campbell L, Fox JA, Laughlin WS, Szathmary EJE, Weiss KM, Woolford E (1986) The settlement of the Americas: a comparison of the linguistic, dental and genetic evidence. Curr Anthropol 27:477–497

    Article  Google Scholar 

  9. Ruhlen MJ, Greenberg J (2007) An Amerindian etymological dictionary. Stanford University Press, Stanford

  10. Latchan RE (1922) La organización social y la creencia de los antiguos araucanos. Rev Museo Hist Nat 3:245–868

    Google Scholar 

  11. Faron LC (1956) Araucanian Patri-Organization and the Omaha system. Am Anthropol 58:435–456

    Article  Google Scholar 

  12. Silva Galdanes O (1984) Los Araucanos Prehispanos ¿Un Caso de Doble Filiación? Boletín del Museo Regional de la Araucanía Temuco 1:41–46

    Google Scholar 

  13. Lehmann-Nitsche R (1921) El grupo lingüístico Alakaluf de los canales magallánicos. Revista del Museo de La Plata, Buenos Aires

    Google Scholar 

  14. Escalada F (1949) El complejo tehuelche. Estudios de etnografía patagónica. Instituto Superior de Estudios Patagónicos Press, Buenos Aires

    Google Scholar 

  15. Casamiquela R (1965) Rectificaciones y ratificaciones hacia una interpretación definitiva del panorama etnológico de la Patagonia y área septentrional adyacente. Instituto de Humanidades: Universidad Nacional del Sur Press, Bahía Blanca

  16. Casamiquela R (1969) Un nuevo panorama etnológico del área pampeana y patagónica adyacente. Pruebas etnohistóricas de la filiación tehuelche septentrional de los guaraníes. Museo Nacional de Historia Natural Press, Santiago de Chile

  17. Sala A, Penacino G, Carnese R, Corach D (1999) Reference database of hypervariable genetic markers of Argentina: applications for molecular anthropology and forensic casework. Electrophoresis 208:1733–1739

    Article  Google Scholar 

  18. Quinque D, Kittler R, Kayser M, Stoneking M, Nasidze I (2006) Evaluation of saliva as a source of human DNA for population and association studies. Anal Biochem 15:272–277

    Article  Google Scholar 

  19. Marino M, Sala A, Corach D (2007) Genetic attributes of the YHRD minimal haplotype in 10 provinces of Argentina. Forensic Sci Int Genet 1:129–133

    Article  PubMed  Google Scholar 

  20. Y Chromosome Haplotype Reference Database. http://www.yhrd.org

  21. Brandstätter A, Niederstatter H, Parson W (2004) Monitoring the inheritance of heteroplasmy by computer-assisted detection of mixed basecalls in the entire human mitochondrial DNA control region. Int. J. Legal Med. 118:47–54

    Article  PubMed  Google Scholar 

  22. Zuccarelli G, Alechine E, Caputo M, Bobillo MC, Corach D, Sala A (2011) Rapid screening for Native American mitochondrial and Y-chromosome haplogroups detection in routine DNA analysis. Forensic Sci Int Genet 5:105–108

    Article  CAS  PubMed  Google Scholar 

  23. Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online 1:47–50

    CAS  PubMed Central  Google Scholar 

  24. Slatkin M (1993) Isolation by distance in equilibrium and non-equilibrium populations. Evolution 41:264–279

    Article  Google Scholar 

  25. Nei M (1987) Molecular Evolutionary Genetics. Columbia University Press, New York

    Google Scholar 

  26. Kayser M, Caglia A, Corach D, Fretwell N, Gehrig C, Graziosi G, Heidorn F, Herrmann S, Herzog B, Hidding M, Honda K, Jobling M, Krawczak M, Leim K, Meuser S, Meyer E, Oesterreich W, Pandya A, Parson W, Penacino G, Perez-Lezaun A, Piccinini A, Prinz M, Schmitt C, Roewer L et al (1997) Evaluation of Y-chromosomal STRs: a multicenter study. Int J Legal Med 110:125–133

    Article  CAS  PubMed  Google Scholar 

  27. Brinkmann C, Forster P, Schürenkamp M, Horst J, Rolf B, Brinkmann B (1999) Human Y chromosomal STR haplotypes in a Kurdish population sample. Int J Leg Med 112:181–183

    Article  CAS  Google Scholar 

  28. Bertorelle G, Excoffier L (1998) Inferring admixture proportions from molecular data. Mol Biol Evol 15:1298–1311

    Article  CAS  PubMed  Google Scholar 

  29. Dupanloup I, Bertorelle G (2001) Inferring admixture proportions from molecular data: extension to any number of parental populations. Mol Biol Evol 18:672–675

    Article  CAS  PubMed  Google Scholar 

  30. Zhivotovsky LA, Underhill PA, Cinnioğlu C, Kayser M, Morar B, Kivisild T, Scozzari R, Cruciani F, Destro-Bisol G, Spedini G, Chambers GK, Herrera RJ, Yong KK, Gresham D, Tournev I, Feldman MW, Kalaydjieva L (2004) The effective mutation rate at y chromosome short tandem repeats, with application to human population-divergence time. Am J Hum Genet 74:50–61

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  31. Pritchard JK, Stephens M, Donnelly P (2000) Inference of Population Structure Using Multilocus Genotype Data. Genetics 155:945–959

    CAS  PubMed  Google Scholar 

  32. Bandelt HJ, Forster P, Sykes BC, Richards MB (1995) Mitochondrial portraits of human populations. Genetics 141:743–753

    CAS  PubMed  Google Scholar 

  33. Bonferroni CE (1936) Teoria statistica delle classi e calcolo delle probabilità. Pubblicazioni del R Istituto Superiore di Scienze Economiche e Commerciali di Firenze 8:3–62

    Google Scholar 

  34. Jimenez JF (2002) Matrilinealidad versus patrilinealidad. La obra de Félix José de Augusta y la polémica acerca de la filiación entre los Reche Mapuche. Centro de Documentación Patagónica Eds, Bahía Blanca

  35. Censabella M (2007) Las lenguas indígenas de la Argentina. Universidad de Buenos Aires Eudeba Eds, Buenos Aires

  36. Merriwether DA (1993) Mitochondrial DNA variation in South American Indians. PhD Dissertation, University of Pittsburgh, Pittsburgh

  37. Merriwether DA, Ferrell RE, Rothhammer F (1995) mtDNA D-loop 6-bp deletion found in the Chilean Aymara: not a unique marker for Chibcha-speaking Amerindians. Am J Hum Genet 56:812–813

    CAS  PubMed Central  PubMed  Google Scholar 

  38. Merriwether DA, Rothhammer F, Ferrell RE (1995) Distribution of the four founding lineage haplotypes in Native Americans suggests a single wave of migration for the New World. Am. J. Phys. Anthropol. 98:411–430

    Article  CAS  PubMed  Google Scholar 

  39. Santos M, Barrantes R (1994) D-Loop mtDNA deletion is a unique marker of Chibchan Americans. Am J Hum Genet 55:413–414

    CAS  PubMed Central  PubMed  Google Scholar 

  40. Perego UA, Achilli A, Angerhofer N, Accetturo M, Pala M, Olivieri A, Kashani BH, Ritchie KH, Scozzari R, Kong QP, Myres NM, Salas A, Semino O, Bandelt HJ, Woodward SR, Torroni A (2009) Distinctive Paleo-Indian migration routes from Beringia marked by two rare mtDNA haplogroups. Curr Biol 19:1–8

    Article  CAS  PubMed  Google Scholar 

  41. Perego UA, Angerhofer N, Pala M, Olivieri A, Lancioni H, Kashani BH, Carossa V, Ekins JE, Gomez-Carballa A, Huber G, Zimmermann B, Corach D, Babudri N, Panara F, Myres NM, Parson W, Semino O, Salas A, Woodward SR, Achilli A, Torroni A (2010) The initial peopling of the Americas: a growing number of founding mitochondrial genomes from Beringia. Genome Res 20:1174–1179

    Article  CAS  PubMed  Google Scholar 

  42. Bodner M, Perego UA, Huber G, Fendt L, Röck A, Zimmermann B, Olivieri A, Gómez-Carballa A, Lancioni H, Angerhofer N, Bobillo MC, Corach D, Woodward SR, Salas A, Achilli A, Torroni A, Bandelt HJ, Parson W (2012) Rapid coastal spread of First Americans: novel insights from South America’s Southern Cone mitochondrial genomes. Genome Res. doi:10.1101/gr.131722.111

    PubMed  Google Scholar 

  43. Ginther C, Corach D, Penacino GA, Rey JA, Carnese RF, Hutz MH, Anderson A, Just J, Salzano FM, King MC (1993) Genetic variation among the Mapuche Indians from the Patagonian region of Argentina: mitochondrial DNA sequence variation and allele frequencies of several nuclear genes. Exs 67:211–219

    Google Scholar 

  44. Moraga ML, Rocco P, Miquel JF, Nervi F, Llop E, Chakraborty R, Rothhammer F, Carvallo P (2000) Mitochondrial DNA polymorphisms in Chilean Aboriginal populations: implications for the Peopling of the Southern Cone of the Continent. Am J Phys Anthropol 113:19–29

    Article  CAS  PubMed  Google Scholar 

  45. Bobillo MC, Zimmermann B, Sala A, Huber G, Röck A, Bandelt HJ, Corach D, Parson W (2010) Amerindian mitochondrial DNA haplogroups predominate in the population of Argentina: towards a first nationwide forensic mitochondrial DNA sequence database. Int J Legal Med 124:263–268

    Article  PubMed  Google Scholar 

  46. Achilli A, Perego UA, Bravi CM, Coble MD, Kong QP, Woodward SR, Salas A, Torroni A, Bandelt HJ (2008) The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies. PLoS ONE 3(3):e1764

    Article  PubMed Central  PubMed  Google Scholar 

  47. Kolman CJ, Bermingham E, Cooke R, Ward RH, Arias TD, Guionneau-Sinclair F (1995) Reduced mtDNA diversity in the Ngobe Amerinds of Panama. Genetics 140:275–283

    CAS  PubMed  Google Scholar 

  48. Gayà-Vidal M, Moral P, Saenz-Ruales N, Gerbault P, Tonasso L, Villena M, Vasquez R, Bravi CM, Dugoujon J-M (2011) mtDNA and Y-chromosome diversity in Aymaras and Quechuas from Bolivia: different stories and special genetic traits of the Andean Altiplano populations. Am J Phys Anthropol 145:215–230

    Article  PubMed  Google Scholar 

  49. Blanco-Verea A, Jaime JC, Brión M, Carracedo A (2010) Y-chromosome lineages in native South American population. Forensic Sci Int Genet 4:187–193

    Article  CAS  PubMed  Google Scholar 

  50. Haplogroup Predictor. http://www.hprg.com/hapest

Download references

Acknowledgments

We would like to thank Dr. RF Carnese for kindly providing the aboriginal samples during the early ’90s and Dr. L. Saccomanno and S. Vannelli for helping in the sampling process of the Patagonian samples. This work was partly supported, by grants UBACyTB047, 2008–2010; UBACyT 2011-2014, Code 20020200100744, to DC and grant PIP 11420090100232-CONICET to AS.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Andrea Sala or Daniel Corach.

Additional information

Daniel Corach and Andrea Sala are members of National Research Council of Argentina (Carrera del Investigador del Consejo Nacional de Investigaciones Científicas y Tecnológicas, CONICET).

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Cite this article

Sala, A., Corach, D. Analysis of admixture and genetic structure of two Native American groups of Southern Argentinean Patagonia. Mol Biol Rep 41, 1533–1543 (2014). https://doi.org/10.1007/s11033-013-2999-z

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11033-013-2999-z

Keywords

Navigation