Skip to main content
Log in

Fifteen novel mutations in the mitochondrial NADH dehydrogenase subunit 1, 2, 3, 4, 4L, 5 and 6 genes from Iranian patients with Leber’s hereditary optic neuropathy (LHON)

  • Published:
Molecular Biology Reports Aims and scope Submit manuscript

Abstract

Leber’s hereditary optic neuropathy (LHON) is an optic nerve dysfunction resulting from mutations in mitochondrial DNA (mtDNA), which is transmitted in a maternal pattern of inheritance. It is caused by three primary point mutations: G11778A, G3460A and T14484C; in the mitochondrial genome. These mutations are sufficient to induce the disease, accounting for the majority of LHON cases, and affect genes that encode for the different subunits of mitochondrial complexes I and III of the mitochondrial respiratory chain. Other mutations are secondary mutations associated with the primary mutations. The purpose of this study was to determine MT-ND variations in Iranian patients with LHON. In order to determine the prevalence and distribution of mitochondrial mutations in the LHON patients, their DNA was studied using PCR and DNA sequencing analysis. Sequencing of MT-ND genes from 35 LHON patients revealed a total of 44 nucleotide variations, in which fifteen novel variations—A14020G, A13663G, C10399T, C4932A, C3893G, C10557A, C12012A, C13934T, G4596A, T12851A, T4539A, T4941A, T13255A, T14353C and del A 4513—were observed in 27 LHON patients. However, eight patients showed no variation in the ND genes. These mutations contribute to the current database of mtDNA polymorphisms in LHON patients and may facilitate the definition of disease-related mutations in human mtDNA. This research may help to understand the disease mechanism and open up new diagnostic opportunities for LHON.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Man PY, Turnbull DM, Chinnery PF (2002) Leber hereditary optic neuropathy. J Med Genet 39(3):162–169

    Article  PubMed  CAS  Google Scholar 

  2. Kumar M, Tanwar M, Saxena R, Sharma P, Dada R (2010) Identification of novel mitochondrial mutations in Leber’s hereditary optic neuropathy. Mol Vis 16:782–792

    PubMed  CAS  Google Scholar 

  3. Yu-Wai-Man P, Griffiths PG, Hudson G, Chinnery PF (2009) Inherited mitochondrial optic neuropathies. J Med Genet 46(3):145–158

    Article  PubMed  CAS  Google Scholar 

  4. Chalmers RM, Schapira AH (1999) Clinical, biochemical and molecular genetic features of Leber’s hereditary optic neuropathy. Biochim Biophys Acta 1410(2):147–158

    Article  PubMed  CAS  Google Scholar 

  5. Zhang AM, Zou Y, Guo X, Jia X, Zhang Q, Yao YG (2009) Mitochondrial DNA mutation m.3635G > A may be associated with Leber hereditary optic neuropathy in Chinese. Biochem Biophys Res Commun 386(2):392–395

    Article  PubMed  CAS  Google Scholar 

  6. Wallace DC, Singh G, Lott MT, Hodge JA, Schurr TG, Lezza AM, Elsas LJ 2nd, Nikoskelainen EK (1988) Mitochondrial DNA mutation associated with Leber’s hereditary optic neuropathy. Science 242(4884):1427–1430

    Article  PubMed  CAS  Google Scholar 

  7. Zhao F, Guan M, Zhou X, Yuan M, Liang M, Liu Q, Liu Y, Zhang Y, Yang L, Tong Y, Wei QP, Sun YH, Qu J, Guan MX (2009) Leber’s hereditary optic neuropathy is associated with mitochondrial ND6 T14502C mutation. Biochem Biophys Res Commun 389(3):466–472

    Article  PubMed  CAS  Google Scholar 

  8. Brown MD, Torroni A, Reckord CL, Wallace DC (1995) Phylogenetic analysis of Leber’s hereditary optic neuropathy mitochondrial DNA’s indicates multiple independent occurrences of the common mutations. Hum Mutat 6(4):311–325

    Article  PubMed  CAS  Google Scholar 

  9. Zhang S, Wang L, Hao Y, Wang P, Hao P, Yin K, Wang QK, Liu M (2008) T14484C and T14502C in the mitochondrial ND6 gene are associated with Leber’s hereditary optic neuropathy in a Chinese family. Mitochondrion 8(3):205–210

    Article  PubMed  Google Scholar 

  10. Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, Drouin J, Eperon IC, Nierlich DP, Roe BA, Sanger F, Schreier PH, Smith AJ, Staden R, Young IG (1981) Sequence and organization of the human mitochondrial genome. Nature 290(5806):457–465

    Article  PubMed  CAS  Google Scholar 

  11. Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N (1999) Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23(2):147

    Article  PubMed  CAS  Google Scholar 

  12. Kogelnik AM, Lott MT, Brown MD, Navathe SB, Wallace DC (1998) MITOMAP: a human mitochondrial genome database—1998 update. Nucleic Acids Res 26(1):112–115

    Article  PubMed  CAS  Google Scholar 

  13. Brown MD, Voljavec AS, Lott MT, MacDonald I, Wallace DC (1992) Leber’s hereditary optic neuropathy: a model for mitochondrial neurodegenerative diseases. Faseb J 6(10):2791–2799

    PubMed  CAS  Google Scholar 

  14. Wang Y, Guo XM, Jia XY, Li SQ, Xiao XS, Guo L, Zhang QJ (2005) Clinical features and the mutation of Leber’s hereditary optic neuropathy in Chinese patients. Zhonghua Yi Xue Yi Chuan Xue Za Zhi 22(3):334–336

    PubMed  CAS  Google Scholar 

  15. Carelli V, Ghelli A, Bucchi L, Montagna P, De Negri A, Leuzzi V, Carducci C, Lenaz G, Lugaresi E, Degli Esposti M (1999) Biochemical features of mtDNA 14484 (ND6/M64V) point mutation associated with Leber’s hereditary optic neuropathy. Ann Neurol 45(3):320–328

    Article  PubMed  CAS  Google Scholar 

  16. Carelli V, Giordano C, d’Amati G (2003) Pathogenic expression of homoplasmic mtDNA mutations needs a complex nuclear-mitochondrial interaction. Trends Genet 19(5):257–262

    Article  PubMed  CAS  Google Scholar 

  17. Povalko N, Zakharova E, Rudenskaia G, Akita Y, Hirata K, Toyojiro M, Koga Y (2005) A new sequence variant in mitochondrial DNA associated with high penetrance of Russian Leber hereditary optic neuropathy. Mitochondrion 5(3):194–199

    Article  PubMed  CAS  Google Scholar 

  18. Crispim D, Canani LH, Gross JL, Tschiedel B, Souto KE, Roisenberg I (2006) The European-specific mitochondrial cluster J/T could confer an increased risk of insulin-resistance and type 2 diabetes: an analysis of the m.4216T > C and m.4917A > G variants. Ann Hum Genet 70(Pt 4):488–495

    Article  PubMed  CAS  Google Scholar 

  19. Canter JA, Olson LM, Spencer K, Schnetz-Boutaud N, Anderson B, Hauser MA, Schmidt S, Postel EA, Agarwal A, Pericak-Vance MA, Sternberg P Jr, Haines JL (2008) Mitochondrial DNA polymorphism A4917G is independently associated with age-related macular degeneration. PLoS One 3(5):e2091. doi:10.1371/journal.pone.0002091

    Article  PubMed  Google Scholar 

  20. Canter JA, Haas DW, Kallianpur AR, Ritchie MD, Robbins GK, Shafer RW, Clifford DB, Murdock DG, Hulgan T (2008) The mitochondrial pharmacogenomics of haplogroup T: MTND2*LHON4917G and antiretroviral therapy-associated peripheral neuropathy. Pharmacogenomics J 8(1):71–77

    Article  PubMed  CAS  Google Scholar 

  21. Phasukkijwatana N, Chuenkongkaew WL, Suphavilai R, Suktitipat B, Pingsuthiwong S, Ruangvaravate N, Atchaneeyasakul LO, Warrasak S, Poonyathalang A, Sura T, Lertrit P (2006) The unique characteristics of Thai Leber hereditary optic neuropathy: analysis of 30 G11778A pedigrees. J Hum Genet 51(4):298–304

    Article  PubMed  CAS  Google Scholar 

  22. Matsumoto M, Hayasaka S, Kadoi C, Hotta Y, Fujiki K, Fujimaki T, Takeda M, Ishida N, Endo S, Kanai A (1999) Secondary mutations of mitochondrial DNA in Japanese patients with Leber’s hereditary optic neuropathy. Ophthalmic Genet 20(3):153–160

    Article  PubMed  CAS  Google Scholar 

  23. Liang M, Guan M, Zhao F, Zhou X, Yuan M, Tong Y, Yang L, Wei QP, Sun YH, Lu F, Qu J, Guan MX (2009) Leber’s hereditary optic neuropathy is associated with mitochondrial ND1 T3394C mutation. Biochem Biophys Res Commun 383(3):286–292

    Article  PubMed  CAS  Google Scholar 

  24. Dalla Rosa I, Goffart S, Wurm M, Wiek C, Essmann F, Sobek S, Schroeder P, Zhang H, Krutmann J, Hanenberg H, Schulze-Osthoff K, Mielke C, Pommier Y, Boege F, Christensen MO (2009) Adaptation of topoisomerase I paralogs to nuclear and mitochondrial DNA. Nucleic Acids Res 37(19):6414–6428

    Article  PubMed  CAS  Google Scholar 

  25. Fearnley IM, Walker JE (1992) Conservation of sequences of subunits of mitochondrial complex I and their relationships with other proteins. Biochim Biophys Acta 1140(2):105–134

    Article  PubMed  CAS  Google Scholar 

  26. Puomila A, Hamalainen P, Kivioja S, Savontaus ML, Koivumaki S, Huoponen K, Nikoskelainen E (2007) Epidemiology and penetrance of Leber hereditary optic neuropathy in Finland. Eur J Hum Genet 15(10):1079–1089

    Article  PubMed  Google Scholar 

  27. Saxena R, de Bakker PI, Singer K, Mootha V, Burtt N, Hirschhorn JN, Gaudet D, Isomaa B, Daly MJ, Groop L, Ardlie KG, Altshuler D (2006) Comprehensive association testing of common mitochondrial DNA variation in metabolic disease. Am J Hum Genet 79(1):54–61

    Article  PubMed  CAS  Google Scholar 

  28. Chen J, Yuan H, Lu J, Liu X, Wang G, Zhu Y, Cheng J, Wang X, Han B, Yang L, Yang S, Yang A, Sun Q, Kang D, Zhang X, Dai P, Zhai S, Han D, Young WY, Guan MX (2008) Mutations at position 7445 in the precursor of mitochondrial tRNA(Ser(UCN)) gene in three maternal Chinese pedigrees with sensorineural hearing loss. Mitochondrion 8(4):285–292

    Article  PubMed  CAS  Google Scholar 

  29. Houshmand M, Mahmoudi T, Panahi MS, Seyedena Y, Saber S, Ataei M (2006) Identification of a new human mtDNA polymorphism (A14290G) in the NADH dehydrogenase subunit 6 gene. Braz J Med Biol Res 39(6):725–730

    Article  PubMed  CAS  Google Scholar 

  30. Fauser S, Luberichs J, Besch D, Leo-Kottler B (2002) Sequence analysis of the complete mitochondrial genome in patients with Leber’s hereditary optic neuropathy lacking the three most common pathogenic DNA mutations. Biochem Biophys Res Commun 295(2):342–347

    Article  PubMed  CAS  Google Scholar 

  31. Dogulu CF, Kansu T, Seyrantepe V, Ozguc M, Topaloglu H, Johns DR (2001) Mitochondrial DNA analysis in the Turkish Leber’s hereditary optic neuropathy population. Eye 15(Pt 2):183–188

    Article  PubMed  CAS  Google Scholar 

  32. Yen MY, Wang AG, Wei YH (2006) Leber’s hereditary optic neuropathy: a multifactorial disease. Prog Retin Eye Res 25(4):381–396

    Article  PubMed  Google Scholar 

  33. Smith KH, Johns DR, Heher KL, Miller NR (1993) Heteroplasmy in Leber’s hereditary optic neuropathy. Arch Ophthalmol 111(11):1486–1490

    Article  PubMed  CAS  Google Scholar 

  34. Kerrison JB, Miller NR, Hsu F, Beaty TH, Maumenee IH, Smith KH, Savino PJ, Stone EM, Newman NJ (2000) A case-control study of tobacco and alcohol consumption in Leber hereditary optic neuropathy. Am J Ophthalmol 130(6):803–812

    Article  PubMed  CAS  Google Scholar 

  35. Black GC, Morten K, Laborde A, Poulton J (1996) Leber’s hereditary optic neuropathy: heteroplasmy is likely to be significant in the expression of LHON in families with the 3460 ND1 mutation. Br J Ophthalmol 80(10):915–917

    Article  PubMed  CAS  Google Scholar 

  36. Jacobi FK, Leo-Kottler B, Mittelviefhaus K, Zrenner E, Meyer J, Pusch CM, Wissinger B (2001) Segregation patterns and heteroplasmy prevalence in Leber’s hereditary optic neuropathy. Invest Ophthalmol Vis Sci 42(6):1208–1214

    PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported by a research grant No. 385, from the National Institute for Genetic Engineering and Biotechnology (NIGEB) of Tehran, Iran.

Conflict of interest

The authors declare no conflict of interest.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Massoud Houshmand.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Rezvani, Z., Didari, E., Arastehkani, A. et al. Fifteen novel mutations in the mitochondrial NADH dehydrogenase subunit 1, 2, 3, 4, 4L, 5 and 6 genes from Iranian patients with Leber’s hereditary optic neuropathy (LHON). Mol Biol Rep 40, 6837–6841 (2013). https://doi.org/10.1007/s11033-013-2801-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11033-013-2801-2

Keywords

Navigation