Skip to main content

Advertisement

Log in

Efficient isolation of high quality nucleic acids from different tissues of Taxus baccata L.

  • Published:
Molecular Biology Reports Aims and scope Submit manuscript

Abstract

Improved and efficient methods were developed for isolating high quality DNA and RNA from different sources of Iranian Yew (Taxus baccata L.). The methods were based on CTAB extraction buffer added with high levels of polyvinylpyrrolidone (PVP) and β-mercaptoethanol to properly remove polysaccharides and prevent oxidation of phenolics. The pellets obtained by ethanol precipitation were washed only with Chloroform: isoamyl alcohol (24:1). So, we could successfully eliminate the dangerous phenol/chloroform extraction steps from the isolation procedure. Both spectrophotometric (A260/A280 and A260/A230 ratios) and agarose electrophoresis analysis of isolated nucleic acids (DNA and RNA) indicated good results. DNA with the average yield of 100–300 μg/g leaf and stem tissue and total RNA with an average yield of 20–30 μg/g cell culture and 80–100 μg/g leaf and stem tissue of Iranian yew could be obtained. Successful amplification of pam and pds by PCR and RT-PCR, showed the integrity of isolated DNA and RNA, respectively.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  1. Baloglu E, Kingston DGI (1999) The taxane diterpenoids. J Nat Prod 62:1448–1472. doi:10.1021/np990176i

    Article  CAS  PubMed  Google Scholar 

  2. Gehrig HH, Winter K, Cushman J, Borland A, Taybi T (2000) An improved RNA isolation method for succulent plant species rich in polyphenols and polysaccharides. Plant Mol Biol Rep 18:369–376. doi:10.1007/BF02825065

    Article  CAS  Google Scholar 

  3. Goldspiel BR (1997) Clinical overview of the taxanes. Pharmacotherapy 17:1105–1255

    Google Scholar 

  4. Jaakola L, Pirttila AM, Halonan M, Hohtola A (2001) Isolation of high quality RNA from bilberry (Vaccinium myrtillus L.) fruit. Mol Biotechnol 19:201–203. doi:10.1385/MB:19:2:201

    Article  CAS  PubMed  Google Scholar 

  5. Kai G, Miaoa Z, Qiu C, Zhang L, Zhaoa L, Li Z, Xua T, Zhang L, Gonga Y, Zhaoc D, Liu D, Sunc X, Tang K (2004) Molecular cloning and characterization of a taxadienol acetyl transferase cDNA from Taxus x media. Plant Sci 167:759–764. doi:10.1016/j.plantsci.2004.05.008

    Article  CAS  Google Scholar 

  6. Kai G, Miaoa Z, Zhang L, Zhao D, Liao Z, Sun X, Zhao L (2006) Molecular cloning and expression analyses of a new gene encoding 3-hydroxy-3methylglutaryl-CoA synthase from Taxus X media. Biol Plant 50(3):359–366. doi:10.1007/s10535-006-0050-0

    Article  CAS  Google Scholar 

  7. Khanuja SPS, Shasany AK, Darokar MP, Kumar S (1999) Rapid isolation of DNA from dry and fresh samples of plants producing large amounts of secondary metabolites and essential oils. Plant Mol Biol Rep 17:1–7. doi:10.1023/A:1007528101452

    Article  Google Scholar 

  8. Liao Z, Chen M, Guo L, Gong Y, Tang F, Sun X, Tang K (2004) Rapid isolation of high-quality total RNA from Taxus and Ginkgo. Prep Biochem Biotechnol 34(3):209–214. doi:10.1081/PB-200026790

    Article  CAS  PubMed  Google Scholar 

  9. Loomis MD (1974) Overcoming problems of phenolics and quinones in the isolation of plant enzymes and organelles. Methods Enzymol 31:528–544. doi:10.1016/0076-6879(74)31057-9

    Article  CAS  PubMed  Google Scholar 

  10. Porebski S, Bailey LG, Baum BR (1997) Modification of a CTAB DNA extraction protocol for plants containing high polysaccharide and polyphenol components. Plant Mol Biol Rep 15:8–15. doi:10.1007/BF02772108

    Article  CAS  Google Scholar 

  11. Walker K, Croteau R (2001) Molecules of interest: Taxol biosynthetic genes. Phytochemistry 58:1–7. doi:10.1016/S0031-9422(01)00160-1

    Article  CAS  PubMed  Google Scholar 

  12. Wang T, Zhang N, Du L (2005) Isolation of RNA of high quality and yield from Ginkgo biloba leaves. Biotechnol Lett 27:629–633. doi:10.1007/s10529-005-3629-1

    Article  PubMed  Google Scholar 

Download references

Acknowledgments

Special thanks are extended to Dr. M. Shariati, E. Roholamin and G. R. Kazemi for their helpful suggestions. This work was supported by Agricultural Biotechnology Research Institute, Central Region of Iran (ABRICI) and Agricultural Research and Education Organization of Iran (AREO).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Mohammad Reza Mofid.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Abbasi Kejani, A., Hosseini Tafreshi, S.A., Khayyam Nekouei, S.M. et al. Efficient isolation of high quality nucleic acids from different tissues of Taxus baccata L.. Mol Biol Rep 37, 797–800 (2010). https://doi.org/10.1007/s11033-009-9607-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11033-009-9607-2

Keywords

Navigation