Abstract
The antimicrobial peptide from a bacterial strain is isolated from soil sample of Margalla Hills of Islamabad, Pakistan. The peptide is found to significantly inhibit the growth of both Gram-positive (Staphylococcus aureus ATCC 6538 and Micrococcus luteus ATCC 10240) and Gram-negative (Escherichia coli ATCC 25922 and Salmonella typhi ATCC 14028) bacteria as compared to gramicidin as standard. The bacterium is identified as Bacillus brevis strain MH9 based on phenotype and phylogenetic analysis. The antibacterial polypeptide was produced optimally at 35 °C after 48 h of growth, precipitated by 50 % ammonium sulphate, and further purified using HPLC. The sequential steps of purification decrease the peptide contents with prominent antibacterial activity. The peptide composed of 11 amino acid was further characterized by FT-IR and NMR. Results suggested that the peptide molecule is a novel antibacterial agent that is effective against both Gram-positive and Gram-negative bacteria. This study may have important implications for new peptide antibiotic that could be a new addition to treat infections.
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Abriouel H, Franz CM, Ben Omar N, Gálvez A (2011) Diversity and applications of Bacillus bacteriocins. FEMS Microbiol Rev 35:201–232
Anderson A, O’Neil R, Surti TR (2001) Stroud, approaches to solving the rigid receptor problem by identifying a minimal set of flexible residues during ligand docking. Chem Biol 8:445–457
Augustin R, Anton-Erxleben F, Jungnickel S et al (2009) Activity of the novel peptide arminin against multi-resistant human pathogens shows the considerable potential of phylogenetically ancient organisms as drug sources. Antimicrob Agents Chemother 53:5245–5250
Awais M, Pervez A, Qayyum S, Saleem M (2008) Effects of glucose, incubation period and pH on the production of peptide antibiotics by Bacillus pumilus. Afr J Microbiol Res 2:114–119
Baindara P, Mandal SM, Chawla N, Singh PK, Pinnaka AK, Korpole S (2013) Characterization of two antimicrobial peptides produced by a halotolerant Bacillus subtilis strain SK.DU.4 isolated from a rhizosphere soil sample. AMB Express 3:2
Berditsch M, Afonin S, Ulrich AS (2007) The ability of Aneurinibacillus migulanus (Bacillus brevis) to produce the antibiotic gramicidin S is correlated with phenotype variation. Appl Environ Microbiol 73:6620–6628
Berdy J (2005) Bioactive microbial metabolites. A personal view. J Antibiot 58:1–26
Bhunia AK, Johnson MG (1992) A modified method to directly SDS-PAGE the bacteriocin of Pediococcus acidilactici. Lett Appl Microbiol 15:5–7
Bourinbaiar AS, Coleman CF (1997) The effect of gramicidin, a topical contraceptive and antimicrobial agent with anti-HIV activity, against herpes simplex viruses type 1 and 2 in vitro. Arch Virol 142:2225–2235
Buchanan JR, Gibbons NE (1974) Bergey’s manual of determinative bacteriology, 8th edn. Williams and Wilkins Company, Baltimore
Burkhart BM, Gassman RM, Langs DA, Pangborn WA, Duax WL, Pletnev V (1999) Gramicidin D conformation, dynamics and membrane ion transport. Biopolymers 51:129–144
Bushra J, Hasan F, Hameed A, Ahmed S (2007) Isolation of Bacillus subtilis MH-4 from soil and its potential of polypeptide antibiotic production. Pak J Pharm Sci 20:26–31
Caccavo F Jr, Lonergan DJ, Lovley DR, Davis M, Stolz JF, McInerney MJ (1994) Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism. Appl Environ Microbiol 60:3752–3759
Charles P, Devanathan V, An bu P, Ponnuswamy MN, Kalaichelvan PT, Hur BK (2008) Purification, characterization and crystallization of an extracellular alkaline protease from Aspergillus nidulans HA-10. J Basic Microbiol 48:347–352
Chen G, Maxwell P, Dunphy GB, Webster JM (1996) Culture conditions for Xenorhabdus and Photorhabdus symbionts of entomo pathogenic nematodes. Nematologica 42:124–127
Chen H, Wang L, Su CX, Gong GH, Wang P, Yu ZL (2008) Isolation and characterization of lipopeptide antibiotics produced by Bacillus subtilis. Lett Appl Microbiol 47:180–186
Egorov NS (1999) Vestn. Mos. Gos. Univ. Ser Biol 4:38–49
Egorov NS, Silaev AB, Katrukha GS et al (1987) Antibiotiki-polipeptidy (polypeptide anyibiotics). Mosk. Gos. Univ, Moscow, p 263
Fang A, Pierson DL, Mishra SK, Koenig DW, Demain AL (1997) Gramicidin S production by Bacillus brevis in simulated microgravity. Curr Microbiol 34:199–204
Hill KK, Ticknor LO, Okinaka RT, Asay M, Blair H, Bliss KA et al (2004) Fluorescent amplified fragment length polymorphism analysis of Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis isolates. Appl Environ Microbiol 70:1068–1080
Jacob L, Zasloff M (1994) Potential therapeutic applications of magainins and other antimicrobial agents of animal origin. In: Boman HG, Marsh J, Goode JA (eds) Antimicrobial peptides, ciba foundation symposium. Willey, Chichester, p 186
Katz E, Demain A (1977) The peptide antibiotics of Bacillus: chemistry, biogenesis, and possible functions. Bacteriol Rev 41:449–474
Kleerebezem M, Quadri LE (2001) Peptide pheromone-dependent regulation of antimicrobial peptide production in gram-positive bacteria: a case of multicellular behavior. Peptides 22:1579–1596
Lee C, Levin A, Branton D (1987) Copper staining: a five-minute protein stains for sodium dodecyl sulfate-polyacrylamide gels. Anal Biochem 166:303–312
Lowry OH, Rosenbrough NJ, Farr AL, Randall RJ (1951) Protein measurement with folin phenol reagent. J Riol Chem 193:265–275
Mendo S, Henriques I, Correia A, Duarte J (2000) Genetic characterization of a new thermotolerant Bacillus licheniformis strain. Curr Microbiol 40:137–139
Mootz HD, Marahiel MA (1997) The tyrocidine biosynthesis operon of Bacillus brevis: complete nucleotide sequence and biochemical characterization of functional internal adenylation domains. J Bacteriol 179:6843–6850
Muhammad SA, Ahmed S (2015) Production and characterization of a new antibacterial peptide obtained from Aeribacillus pallidus SAT4. Biotechnol Rep 8:72–80
Muhammad SA, Ahmad S, Hameed A (2009) Antibiotic production by thermophilic Bacillus species SAT-4. Pak J Pharm Sci 22:339–345
Muhammad SA, Ahmed S, Ismail T, Hameed A (2014) Taguchi’s experimental design for optimizing the production of novel thermostable polypeptide antibiotic from Geobacillus pallidus SAT4. Pak J Pharm Sci 27:11–23
Oka H, Harada K, Suzuki M, Nakazawa H, Ito Y (1989) Foam counter-current chromatography of bacitracin. I. Batch separation with nitrogen and water free of additives. J Chromatogr 482:197–205
Pichard B, Larue JP, Thouvenot D (1995) Gavaserin and saltavalin, new peptide antibiotics produced by Bacillus polymyxa. FEMS Microbiol Lett 133:215–218
Priest FG, Barker M, Baillie LWJ, Holmes EC, Maiden MCJ (2004) Population structure and evolution of the Bacillus cereus group. J Bacteriol 186:7959–7970
Rijs AM, Kabelac M, Abo-Riziq A, Hobza P, de Vries MS (2011) Isolated gramicidin peptides probed by IR spectroscopy. Chem Phys Chem 12:1816–1821
Robertson DB, Maibach HI (1998) Dermatologic pharmacology. In: Katzung BG (ed) Basic and clinical pharmacology. Appleton-Lange, Norwalk, p 1000
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
Schallmey M, Sing A, Ward OP (2004) Developments in the use of Bacillus specie for industrial production. Can J Microbiol 50:1–17
Sen S, Sahu NP, Mahato SB (1995) Pentacyclic triterpenoids from Mimusops elengi. Phytochem 38:205–207
Shimogki H, Takeuchi K, Nishino T, Ohdera M, Kudo T, Ohba K, Iwnma M, Irie M (1991) Purification and properties of a novel surface active agent and alkaline resistant protease from Bacillus sp. Agric Biol Chem 55:2251–2258
Smith NK, Gilmour SG, Rastall RA (1997) Stational optimization of enzymatic synthentic of derivatives of tetrabore and sucrose. Enzyme Microbial Technol 21:349–354
Spellberg BR, Guidos D, Gilbert J, Bradley HW, Boucher WM, Scheld JG, Edwards BJ (2008) The epidemic of antibiotic-resistant infections: a call to action for the medical community from the Infectious Diseases Society of America. Clin Infect Dis 46:155–164
Stachelhaus T, Schneider A, Marahiel M (1995) Rational design of peptide antibiotics by targeted replacement of bacterial and fungal domains. Science 269:69–72
Sunaryanto R, Marwoto B, Irawadi TT, Masud ZA, Hartoto L (2010) Antibiotic compound from marine actinomycetes (Streptomyces sp A11): isolation and structure elucidation. Indo J Chem 10:219–225
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599
Touré Y, Ongena M, Jacques P, Guiro A, Thonart P (2004) Role of lipopeptides produced by Bacillus subtilis GA1 in the reduction of grey mould disease caused by Botrytis cinerea on apple. J Appl Microbiol 96:1151–1160
Webster JM, Chen G, Hu K, Li J (2002) Bacterial metabolites. In: Gaugler R (ed) Entomo pathogenic nematology. CAB International, Wallingford, pp 99–114
Wingfield P (2001) Protein precipitation using ammonium sulfate. Curr Prot Protein Sci A.3F.1–A.3F.8
Woolley GA, Wallace BA (1994) Membrane protein structure: lessons from gramicidin., Methods in Physiology SeriesSpringer, New York, pp 314–334
Yasawong M, Areekit S, Pakpitchareon A, Santiwatanakul S, Chansiri K (2011) Characterization of thermophilic halotolerant Aeribacillus pallidus TD1 from Tao dam hot spring, Thailand. Int J Mol Sci 12:5294–5303
Zhang L, Falla TJ (2004) Cationic antimicrobial peptides—an update. Exp Opin Investig Drugs 13:97–106
Zuber PA, Marahiel MA (1997) In: Strohl W (ed) Biotechnology of antibiotics. Marcel Dekker, New York, pp 187–216
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There was no funding available for this research. We acknowledge the administrative support of Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad and Institute of Molecular Biology and Biotechnology, Bahauddin Zakariya University Multan, Pakistan.
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Muhammad, S.A., Ali, A., Naz, A. et al. A New Broad-Spectrum Peptide Antibiotic Produced by Bacillus brevis Strain MH9 Isolated from Margalla Hills of Islamabad, Pakistan. Int J Pept Res Ther 22, 271–279 (2016). https://doi.org/10.1007/s10989-015-9508-2
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DOI: https://doi.org/10.1007/s10989-015-9508-2