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1D and 3D supramolecular architectures in the salts of Meso-5,7,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane with (2E)-2-cyano-2-(hydroxyimino)acetamide and 2-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl) hydrazinecarboxamide sustained by charge-assisted and conventional hydrogen bonds

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Abstract

Meso-5,7,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane (tet-a) — (2E)-2-cyano-2-(hydroxyimino) acetamide (caH) (1:4) (1) is a salt [tet-aH2]2+ ·2[caH]· 2[ca] containing both neutral and deprotonated acetamide units. The acetamide units of the two types are linked by NH⋯O and OH⋯O hydrogen bonds into negatively charged chains; the chains are connected by the macrocyclic cations to form H-bonded ribbons. Tet-a and 2-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)hydrazinecarboxamide (urH) form a salt of 1:2:2 stoichiometry, [tet-aH2]2+·2[ur]·2H2O (2). In (2), the deprotonated ur units form a negatively charged 2D network substructure, and the layers are linked by the cations and water molecules to form a 3D framework. The tetraazamacrocycle shows different modes of the protonation of amine functionalities that depend on a substrate.

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Abbreviations

Tet-a:

Meso-5,7,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane

cyclen:

1,4,7,10-tetraazacyclododecane

cyclam:

1,4,8,11-tetraazacyclotetradecane

azacyclam:

1,4,6,8,11-pentaazacyclotetradecane

caH:

(2E)-2-cyano-2-(hydroxyimino)acetamide

urH:

2-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)hydrazinecarboxamide

18C6:

18-crown-6

References

  1. D. E. Ingber, Sci. Amer., 278, No. 1, 48–57 (1998).

    Article  CAS  Google Scholar 

  2. E. Kimura, In Progress in Inorganic Chemistry, K. D. Karlin (ed.), 41, 443–491, Wiley, New York (1994); (b) E. Kimura and M. Shionoya, in: Metal Ions in Biological Systems, A. Sigel and H. Sigel (eds.), 33, 29–52, Marcel Dekker, New York (1996); (c) E. Kimura, T. Koike, and M. Shionoya, in: Structure and Bonding: Metal Site in Proteins and Models, P. J. Sadler (ed.), 89, 1–28 (Springer, Berlin (1997); (d) E. Kimura, N. Katsube, T. Koike, M. Shiro, and S. Aoki, Supramol. Chem., 14, 95–102 (2002).

    Google Scholar 

  3. S. Aoki, M. Shiro, T. Koike, and E. Kimura, J. Am. Chem. Soc., 122, 576–584 (2000).

    Article  CAS  Google Scholar 

  4. J. H. R. Tucker, M. Shionoya, T. Koike, and E. Kimura, Bull. Chem. Soc. Jpn., 68, 2465–2469 (1995).

    CAS  Google Scholar 

  5. P. V. Bernhardt and E. J. Hayes, Inorg. Chem., 42, 1371–1377 (2003).

    Article  CAS  Google Scholar 

  6. A. A. Yavolovskii, E. I. Ivanov, and R. Yu. Ivanova, Russ. J. Gen. Chem., 73, 1402/1403 (2003).

    Google Scholar 

  7. Z. Otwinowski and W. Minor, Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, C. W. Carter and R. M. Sweet (eds.), 276, 307–326 (1997).

  8. Bruker Axs Inc., Madison, WI 53719-1173, USA.

  9. G. M. Sheldrick, SHELXS-97_and SHELXL-97: Programs for the Solution and Refinement of Crystal Structures, Univ. Göttingen, Germany (1997).

    Google Scholar 

  10. R. M. Gregson, C. Glidewell, G. Ferguson, and A. J. Lough, Acta Crystallogr., B56, 39–57 (2000).

    CAS  Google Scholar 

  11. M. C. Etter, Acc. Chem. Res., 23, 120–126 (1990).

    Article  CAS  Google Scholar 

  12. M. S. Fonari, Yu. A. Simonov, Yu. M. Chumakov, et al., Supramol. Chem., 16, 23–30 (2004).

    Article  CAS  Google Scholar 

  13. F. H. Allen, Acta Crystallogr., B58, 380–388 (2002).

    CAS  Google Scholar 

  14. K. F. Bowes, G. Ferguson, A. J. Lough, and C. Glidewell, ibid., C59, o147–o149 (2003).

    CAS  Google Scholar 

  15. N. Arulsamy and D. S. Bohle, J. Org. Chem., 65, 1139–1143 (2000).

    Article  CAS  Google Scholar 

  16. K. V. Domasevitch, V. V. Ponomareva, E. B. Rusanov, et al., Inorg. Chim. Acta., 268, 93–101 (1998).

    Article  CAS  Google Scholar 

  17. V. V. Ponomareva, V. V. Skopenko, K. V. Domasevitch, et al., Naturforsch, Teil B., 52, 901–905 (1997).

    CAS  Google Scholar 

  18. Yu. A. Simonov, M. S. Fonari, J. Lipkowski, et al., J. Inclus. Phenom., 46, 27–35 (2003).

    Article  CAS  Google Scholar 

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Original Russian Text Copyright © 2005 by M. S. Fonari, Yu. A. Simonov, Yu. M. Chumakov, E. V. Ganin, A. A. Yavolovskii, G. Bocelli, and M. M. Botoshansky

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Translated from Zhurnal Strukturnoi Khimii, Vol. 46, Supplement, pp. S95–S101, 2005.

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Fonari, M.S., Simonov, Y.A., Chumakov, Y.M. et al. 1D and 3D supramolecular architectures in the salts of Meso-5,7,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane with (2E)-2-cyano-2-(hydroxyimino)acetamide and 2-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl) hydrazinecarboxamide sustained by charge-assisted and conventional hydrogen bonds. J Struct Chem 46 (Suppl 1), S96–S102 (2005). https://doi.org/10.1007/s10947-006-0158-2

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  • DOI: https://doi.org/10.1007/s10947-006-0158-2

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