Abstract
Software package for supercomputer MBC 1000 modeling chain-type isomer-isomeric structural phototransitions has been described. A specific character of algorithmization and program design for supercomputer was examined. More flexible programming was demonstrated to be necessary for resolving the set tasks in comparison with PC. New software complex provides an opportunity for modeling multi-step transformations virtually not limiting the total dimension of a problem. Computation examples for isomerisomeric transformation of heptadienylbenzene are presented.
Similar content being viewed by others
References
R. D. Cordon and J. M. Hollas, J. Mol. Struct., 293, 193–196 (1993).
R. D. Cordon and J. M. Hollas, J. Chem. Phys., 99, 3380–3389 (1993).
K. B. Eisenthal, An. Rev. Phys. Chem., 28, 207–232 (1977).
D. H. Levy, ibid, 31, 197–225 (1980).
J. L. Kinsey, ibid., 28, 349–372 (1977).
V. I. Baranov and L. A. Gribov, Zh. Prikl. Spectrosk., 71, No. 4, 421–428 (2004).
L. A. Gribov, Izv. Ross. Akad. Nauk, Ser. Khim. No. 2, 213–219 (2002).
L. A. Gribov, Vestn. Ross. Akad. Nauk, 72, No. 7, 611–617 (2002).
S. A. Astakhov and V. I. Baranov, Opt. Spectrosk., 90, 237–245 (2001).
V. I. Baranov, M. V. Zavalii, and L. A. Gribov, Zh. Prikl. Spectrosk., 70, 626–634 (2003).
V. I. Baranov, M. V. Zavalii, and L. A. Gribov, ibid., 71, 295–301 (2004).
MPI: The Complete Reference, M. Snir, S. Otto, S. Huss-Lederman, D. Walker, and J. Dongarra, Massachusetts Institute of Technology, Massachusetts (1996).
B. Gropp, Tutorial on MPI: The Message Passing Interfase, Massachusetts Institute of Technology, Massachusetts (1996).
L. A. Gribov and V. A. Dement’ev, Methods and Algorithms of Calculations in the Molecular Vibration Spectra Theory [in Russian], Nauka, Moscow (1981).
V. I. Baranov, F. A. Savin, and L. A. Gribov, Calculation Programs for Vibronic Spectra of Polyatomic Molecules [in Russian], Nauka, Moscow (1983).
L. A. Gribov and V. A. Dement’ev, Modeling of Vibration Spectra of Complex Compounds on Computers [in Russian], Nauka, Moscow (1989).
V. O. Genger, “New Parametric Approach to Determination of Excited States in Adiabatic Theory of Vibronic Spectra of Polyatomic Molecules,” Physical Mathematical Sciences Candidate’s Dissertation, K. A. Timiryazev Agricultural Academy, Moscow (1996).
L. A. Gribov, From Spectrum Theory to the Theory of Chemical Transformations [in Russian], Editorial (2001).
Author information
Authors and Affiliations
Additional information
Original Russian Text Copyright © 2005 by L. A. Gribov, V. A. Dement’ev, M. V. Zavalii, and V. I. Baranov
__________
Translated from Zhurnal Strukturnoi Khimii, Vol. 46, No. 2, pp. 303–310, March–April, 2005.
Rights and permissions
About this article
Cite this article
Gribov, L.A., Dement’ev, V.A., Zavalii, M.V. et al. Computer modeling of complex molecule isomerization using supercomputer of MBC 1000 type. J Struct Chem 46, 295–302 (2005). https://doi.org/10.1007/s10947-006-0043-z
Received:
Issue Date:
DOI: https://doi.org/10.1007/s10947-006-0043-z