Skip to main content
Log in

Development of Core Collection in Pigeonpea [Cajanus cajan (L.) Millspaugh] using Geographic and Qualitative Morphological Descriptors

  • Published:
Genetic Resources and Crop Evolution Aims and scope Submit manuscript

Abstract

Pigeonpea is an important pulse crop grown by smallholder farmers in the semi-arid tropics. Most of the pigeonpea cultivars grown to date are selections from the landraces, with a narrow genetic base. With the expansion of the crop to newer areas, problems of local importance are to be addressed. Hence, an economically feasible and faster germplasm evaluation mechanism, such as a core collection, is required. This article describes the development of core collection from 12,153 pigeonpea accessions collected from 56 countries and maintained at ICRISAT, Patancheru, India. The germplasm accessions from 56 countries were placed under 14 clusters based primarily on geographic origin. Data on 14 qualitative morphological traits were used for cluster formation by Ward’s method. From each cluster ≈10% accessions were randomly selected to constitute a core collection comprising 1290 accessions. Mean comparisons using Newman–Keuls test, variances’ comparisons by Levene’s test, and comparison of frequency distribution by χ2-test indicated that the core collection was similar to that of the entire collection for various traits and the genetic variability available in the entire collection is preserved in the core collection. The Shannon–Weaver diversity index for different traits was also similar for both entire and core collection. All the important phenotypic associations between different traits available in the entire collection were preserved in the core collection. The core collection constituted in the present study facilitates identification of useful traits economically and expeditiously for use in pigeonpea improvement.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • I.S. Bisht R.K. Mahajan D.P. Patel (1998) ArticleTitleThe use of characterization data to establish the Indian mungbean core collection and assessment of genetic variability Genet. Resour. Crop Evol. 45 127–133

    Google Scholar 

  • A.H.D. Brown (1989a) The case for core collections A.H.D. Brown O.H. Frankel D.R. Marshall J.T. Williams (Eds) The Use of Plant Genetic Resources Cambridge University Press Cambridge 136–155

    Google Scholar 

  • A.H.D. Brown (1989b) ArticleTitleCore collections: a practical approach to genetic resources management Genome 31 818–824

    Google Scholar 

  • A.H.D. Brown (1995) The core collection at the crossroads T. Hodkin A.H.D. Brown J.L. Hintum Particlevan E.A.V. Morales (Eds) Core Collections for Today and Tomorrow International Plant Genetic Resources Institute (IPGRI), Wiley-Sayce Publication RomeItaly 3–19

    Google Scholar 

  • Food and Agriculture Organization, 2003, FAOSTAT database http://www/FAO.ORG.

  • O.H. Frankel (1984) Genetic perspective of germplasm conservation W. Arber K. Llimensee W.J. Peacock P. Starlinger (Eds) Genetic Manipulations: Impact on Man and Society Cambridge University Press Cambridge 161–170

    Google Scholar 

  • O.H. Frankel A.H.D. Brown (1984) Current plant genetic resources – a critical appraisal V.L. Chopra B.C. Joshi R.P. Sharma H.C. Bansal (Eds) Genetics: New Frontiers Oxford and IBH Publ. Co. New Delhi 1–13

    Google Scholar 

  • M.D. Frankel T.B. Brennman C.C. Holbrook (1999) ArticleTitleIdentification of resistance to Rhizoctonia limb rot in a core collection of peanut germplasm Plant Dis. 83 944–948

    Google Scholar 

  • R.M. Hannon W.J. Kaizer F.J. Muehlbauer (1994) Development and utilization of the USDA chickpea germplasm core collection Agronomy Abstacts ASA Madison, WI, USA 217

    Google Scholar 

  • C.C. Holbrook W.F. Anderson (1995) ArticleTitleEvaluation of a core collection to identify resistance to late leafspot in groundnut Crop Sci. 35 1700–1702 Occurrence Handle10.2135/cropsci1995.0011183X003500060032x

    Article  Google Scholar 

  • C.C. Holbrook W.F. Anderson R.N. Pittman (1993) ArticleTitleSelection of core collection from the U.S. germplasm collection of peanut Crop Sci. 33 859–861 Occurrence Handle10.2135/cropsci1993.0011183X003300040044x

    Article  Google Scholar 

  • InstitutionalAuthorNameIBPGR and ICRISAT (1993) Descriptors for pigeonpea [(Cajanus cajan (L.) Millsp.] International Board for Plant Genetic Resources RomeItaly

    Google Scholar 

  • M.T. Jackson J.L. Pham H.J. Newbury B.V. Ford-Lloyd P.S. Virk (1999) A core collection for rice-needs, opportunities, and constraints R.C. Johnson T. Hodkin (Eds) Core Collections for Today and Tomorrow International Plant Genetic Resources Institute RomeItaly 18–27

    Google Scholar 

  • M. Keuls (1952) ArticleTitleThe use of the “Studentized range” in connection with an analysis of variance Euphytica 1 112–122 Occurrence Handle10.1007/BF01908269

    Article  Google Scholar 

  • P.L. Kumar A.T. Jones D.V.R. Reddy (2003) ArticleTitleA novel mite-transmitted virus with a divided RNA genome closely associated with pigeonpea sterility mosaic disease Phytopathology 93 81–91

    Google Scholar 

  • H. Levene (1960) Robust tests for equality of variances I. Olkin (Eds) Contributions to Probability and Statistics: Essays in Honour of Harold Hotelling Stanford University Press Stanford USA 278–292

    Google Scholar 

  • K.E. McPhee A. Tullu J.M. Kraft F.J. Muehlbauer (1999) ArticleTitleResistance to Fusarium wilt race 2 in the Pisum core collection J. Amer. Soc. Horti. Sci. 124 28–31

    Google Scholar 

  • P.N. Micklas R. Delorme R. Hannan M.H. Dickson (1999) ArticleTitleUsing a sub sample of the core collection to identify new sources of resistance to white mold in common bean Crop Sci. 39 569–573

    Google Scholar 

  • G.W. Milligan M. Cooper (1985) ArticleTitleAn examination of procedures for determining the number of clusters in a data set Psychometrica 50 159–179

    Google Scholar 

  • Y.L. Nene V.K. Sheila (1990) Pigeonpea: Geography and importance Y.L. Nene S.D. Hall V.K. Shiela (Eds) The pigeonpea C.A.B International WallingfordOxon OX 10 8DEUK 1–14

    Google Scholar 

  • D. Newman (1939) ArticleTitleThe distribution of range in samples from a normal population expressed in terms an independent estimate of standard deviation Biometrika 31 20–30

    Google Scholar 

  • L.J. Reddy (1990) Pigeonpea: morphology Y.L. Nene S.D. Hall V.K. Shiela (Eds) The Pigeonpea C.A.B International WallingfordOxon OX10 8DEUK 44–87

    Google Scholar 

  • M.V. Reddy S.B. Sharma Y.L. Nene (1990) Pigeonpea: Disease Management Y.L. Nene S.D. Hall V.K. Shiela (Eds) The Pigeonpea C.A.B. International WallingfordOxon OX10 8DEUK 303–347

    Google Scholar 

  • InstitutionalAuthorNameSAS Institute (1989) SAS/STAT User’ Guide Version 6 EditionNumber4 SAS InstituteInc. Cary, NC, USA

    Google Scholar 

  • C.E. Shannon W. Weaver (1949) The mathematical theory of communication University Illinois Press Urbana USA

    Google Scholar 

  • L. Singh S.C. Gupta D.G. Faris (1990) Pigeonpea Breeding Y.L. Nene S.D. Hall V.K. Shiela (Eds) The Pigeonpea C.A.B. International WallingfordOxon OX10 8DEUK 375–399

    Google Scholar 

  • D.Z. Skinner G.R. Bauchan G. Auricht S. Hughes (1999) ArticleTitleA method for the efficient management and utilization of large germplasm collections Crop Sci. 39 1237–1242

    Google Scholar 

  • J. Tohme P. Jones S. Beebe M. Iwanga (1995) The combined use of agroecological and characterization data to establish the CIAT Phaseolus vulgaris core collection T. Hodkin A.H.D. Brown Th.J.L. Hintum Particlevan B.A.V. Morales (Eds) Core Collection of Plant Genetic Resources International Plant Genetic Resources Institute (IPGRI), John Willey & Sons New York, USA 95–108

    Google Scholar 

  • H.D. Upadhyaya P.J. Bramel S. Singh (2001a) ArticleTitleDevelopment of a chickpea core subset using geographic distribution and quantitative traits Crop Sci. 41 206–210

    Google Scholar 

  • H.D. Upadhyaya M.E. Ferguson P.J. Bramel (2001b) ArticleTitleStatus of the Arachis germplasm collection at ICRISAT Peanut Sci. 28 89–96 Occurrence Handle10.3146/i0095-3679-28-2-10

    Article  Google Scholar 

  • H.D. Upadhyaya R. Ortiz P.J. Bramel S. Singh (2003) ArticleTitleDevelopment of a groundnut core collection using taxonomical, geographical, and morphological descriptors Genet. Resour. Crop Evol. 50 139–148 Occurrence Handle1:CAS:528:DC%2BD3sXjslyit7c%3D

    CAS  Google Scholar 

  • J. Ward (1963) ArticleTitleHierarchical grouping to optimize an objective function J. Amer. Stat. Assoc. 38 236–244

    Google Scholar 

  • K. Wojciech W. Bogdan A. Somsak K. Pawe (2000) ArticleTitleAn analysis of isozymic loci polymorphism in the core collection of the Polish Pisum genebank Genet. Resour. Crop Evol. 47 583–590

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hari D. Upadhyaya.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Reddy, L.J., Upadhyaya, H.D., Gowda, C.L.L. et al. Development of Core Collection in Pigeonpea [Cajanus cajan (L.) Millspaugh] using Geographic and Qualitative Morphological Descriptors. Genet Resour Crop Evol 52, 1049–1056 (2005). https://doi.org/10.1007/s10722-004-6152-7

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10722-004-6152-7

Keywords

Navigation