Abstract
Tobacco mosaic virus (TMV) caused serious loss in yield and quality of tobacco every year. It is a long-term goal to improve the tobacco resistance against TMV by tobacco breeding. N gene was the firstly reported TMV-resistant gene, which showed resistance against all Tobamoviruses except the Ob stain and belonged to the toll-interleukin-1 receptor/nucleotide-binding site/leucine-rich repeat class of plant resistance (R) genes. At present, N gene had already been widely used in tobacco conventional breeding, but there is rare available molecular maker used in marker-assisted selection of TMV resistance. In this study, we designed a pair of primers that specific amplify N gene fragment based on the sequence of N gene intron III, named N-marker. Then, we identified TMV resistance by two selecting methods, PCR with N-marker and inoculated with the TMV-C strain. Results from the two method showed that (1) 13 varieties among 67 tobacco varieties displayed hypersensitive reaction when inoculated with the TMV-C strain, also contained N gene fragments screened by PCR with N-marker; (2) 105 strains of 200 BC1 strains showed resistance against TMV when inoculated with TMV-C strain, meanwhile, 103 of the 105 strains contained N gene fragment verified by PCR with N-marker. Therefore, the N-marker is reliable for high throughput screening of germplasm resources and tobacco breeding materials in selection of N-mediated TMV resistance. Our study not only developed a molecular marker for tobacco breeding, but also identified new germplasm resources that are resistant to TMV.
Similar content being viewed by others
References
Beekwilder KM (1999) The inheritance of resistance to tobacco mosaic virus in tobacco introductions (Doctoral dissertation, Virginia Polytechnic Institute and State University)
Cheng L, Yang A, Jiang C, Ren M, Zhang Y, Feng Q, Wang S, Guan Y, Luo C (2015) Quantitative trait loci mapping for plant height in tobacco using linkage and association mapping methods. Crop Sci 55(2):641–647
Culver JN, Lindbeck AGC, Dawson WO (1991) Virus-host interactions: induction of chlorotic and necrotic responses in plants by tobamoviruses. Annu Rev Phytopathol 29(1):193–217
Dawson WO, Hilf ME (1992) Host-range determinants of plant viruses. Annu Rev Plant Biol 43(1):527–555
Dekkers JC, Hospital F (2002) The use of molecular genetics in the improvement of agricultural populations. Nat Rev Genet 3(1):22–32
Dinesh-Kumar SP, Baker BJ (2000) Alternatively spliced N resistance gene transcripts: their possible role in tobacco mosaic virus resistance. Proc Natl Acad Sci 97(4):1908–1913
Erickson FL, Dinesh-Kumar SP, Holzberg S, Ustach CV, Dutton M, Handley V, Corr C, Baker BJ (1999) Interactions between tobacco mosaic virus and the tobacco N gene. Philos Trans Royal Soc B 354(1383):653
Gao Y, Xiao B, Tong Z, Xu S (2011) Identification of molecular markers linked to TMV resistance gene in tobacco and its application in screening resistance varieties. Mol Plant Breeding 9(5):585–591
Holmes FO (1955) Control of TMV in Tobacco. Phytopathology 45:224–225
Kyle MM (1993) Resistance to viral diseases in vegetables: genetics and breeding. Timber Press, Portland
Lamb CJ (1994) Plant disease resistance genes in signal perception and transduction. Cell 76(3):419–422
Lin LY, Zhang YY, Zhou YF, Cheng YZ, Guo JP, Pan DR (2013) Determine and selection of tobacco geramplasms’ resistance ability to TMV. J Plant Genet Res 14(6):1173–1178
Liu L, Guo Z, Wan X, Yan P, Qiao C, Liu D (2010a) Establishment of PCR detection system for marker gene N gene and its application in genetic breeding. Mol Plant Breeding 8(1):167–171
Liu K, Ma X, Lu W, Qin L (2010b) Difference of Micro-HR to Tobacco Mosaic Virus between Nicotiana Glutinosa and N. tabacum var. Samsun NN. Chin Tob Sci 31(4):25–27
Marathe R, Anandalakshmi R, Liu Y, Dinesh-Kumar SP (2002) The tobacco mosaic virus resistance gene, N. Mol Plant Pathol 3(3):167–172
Morris M, Dreher K, Ribaut JM, Khairallah M (2003) Money matters (II): costs of maize inbred line conversion schemes at CIMMYT using conventional and marker-assisted selection. Mol Breed 11(3):235–247
Peleman JD, van der Voort JR (2003) Breeding by design. Trends Plant Sci 8(7):330–334
Ryals JA, Neuenschwander UH, Willits MG, Molina A, Steiner HY, Hunt MD (1996) Systemic acquired resistance. The plant cell 8(10):1809
Shen LL, Sun HJ, Qian YM, Chen D, Zhan HX, Yang JG, Wang FL (2016) Screening and identification of tobacco mutants resistant to tobacco and cucumber mosaic viruses. J Agric Sci 154(3):487–494
Sierro N, Battey JN, Ouadi S, Bakaher N, Bovet L, Willig A, Goepfert S, Peitsch MC, Ivanov NV (2014) The tobacco genome sequence and its comparison with those of tomato and potato. Nat Commun 5:3833. https://doi.org/10.1038/ncomms4833
Stange C, Matus JT, Elorza A, Arce-Johnson P (2004) Identification and characterization of a novel tobacco mosaic virus resistance N gene homologue in Nicotiana tabacum plants. Funct Plant Biol 31(2):149–158
Takabatake R, Seo S, Mitsuhara I, Tsuda S, Ohashi Y (2006) Accumulation of the two transcripts of the N gene, conferring resistance to tobacco mosaic virus, is probably important for N gene-dependent hypersensitive cell death. Plant Cell Physiol 47(2):254–261
Thomas PE, Fulton RW (1968) Resistance to spread of virus from cell to cell in TI 245 tobacco. Virology 35(1):108–111
Tobias I, Rast ATB, Maat DZ (1982) Tobamoviruses of pepper, eggplant and tobacco: comparative host reactions and serological relationships. Eur J Plant Pathol 88(6):257–268
Torres AM, Avila CM, Gutierrez N, Palomino C, Moreno MT, Cubero JI (2010) Marker-assisted selection in faba bean (Viciafaba L.). Field Crop Res 115(3):243–252
Valleau WD (1952) Breeding tobacco for disease resistance. Econ Bot 6(1):69–102
Vinocur B, Altman A (2005) Recent advances in engineering plant tolerance to abiotic stress: achievements and limitations. CurrOpin Biotech 16(2):123–132
Whitham S, Dinesh-Kumar SP, Choi D, Hehl R, Corr C, Baker B (1994) The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor. Cell 78(6):1101–1115
Whitham S, McCormick S, Baker B (1996) The N gene of tobacco confers resistance to tobacco mosaic virus in transgenic tomato. Proc Natl Acad Sci 93(16):8776–8781
Xu SJ, Xiao BG, Li YP (2009) Progress on TMV resistant breeding of tobacco. Chin Agric Sci Bull 25(16):91–94
Zhang GY, Chen M, Guo JM, Xu TW, Li LC, Xu ZS, Ma YZ, Chen XP (2009a) Isolation and characteristics of the CN gene, a tobacco mosaic virus resistance N gene homolog, from tobacco. Biochem Genet 47(3–4):301–314
Zhang XW, Wang ZD, Mu JM, Liu YH, Ren M, Gao JM (2009b) Status and prospects of tobacco germplasm in China. Chin Tob Sci 30(6):78–83
Acknowledgements
This work was supported by a Grant from the Tobacco Genome Project of China National Tobacco Company (110201301008), the Science Foundation for Young Scientists of the Tobacco Research Institute of the Chinese Academy of Agricultural Sciences (2016B04) and Shandong Provincial Natural Science Foundation, China (ZR2016CB39).
Author information
Authors and Affiliations
Corresponding author
Electronic supplementary material
Below is the link to the electronic supplementary material.
Rights and permissions
About this article
Cite this article
Yu, Z., Liuying, W., Aiguo, Y. et al. Development and application of a molecular marker for TMV resistance based on N gene in tobacco (Nicotiana tabacum). Euphytica 213, 259 (2017). https://doi.org/10.1007/s10681-017-2044-8
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s10681-017-2044-8