Skip to main content
Log in

Molecular mapping of a gene conferring resistance to Aphanomyces root rot (black root) in sugar beet (Beta vulgaris L.)

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

Caused by Aphanomyces cochlioides Drechsler, Aphanomyces root rot is a serious disease of sugar beet (Beta vulgaris L.), for which sources of resistance are scarce. To identify the segregation pattern of the rare resistance trait found in Japanese sugar beet line ‘NK-310mm-O’, F1 and BC1F2 seedings, drawn from a cross between ‘NK-310mm-O’ and susceptible line ‘NK-184mm-O’, were inoculated with zoospores and their survival evaluated in the greenhouse. Resistance segregation followed was that of a single dominant gene, which was designated Acr1 (Aphanomyces cochlioides resistance 1). Molecular markers tightly linked to Acr1 were identified by bulked segregant analysis of two BC1F2 populations. Fourteen AFLP markers linked to Acr1 were identified, the closest located within ±3.3 cM. Three F5 lines and two BC2F1 lines, selected on the basis of their Acr1-AFLP markers, were tested for their resistance to Aphanomyces root rot in a highly infested field. Results indicated that Acr1 conferred significant resistance to Aphanomyces root rot at the field level. Based on its linkage with CAPS marker tk, a representative marker for chromosome III, Acr1 was located on this chromosome. The clear linkage between tk and Rhizomania resistance trait Rz1, suggests the clustering of major disease resistance genes on chromosome III.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  • Barzen E, Stahl R, Fuchs E, Borchardt DC, Salamini F (1999) Development of coupling-repulsion-phase SCAR markers diagnostic for the sugar beet Rr1 allele conferring resistance to Rhizomania. Mol Breed 3:231–238

    Article  Google Scholar 

  • Bochstahler HW, Hogaboam GJ, Schneider CL (1950) Further studies on the inheritance of black root resistance in sugar beets. Proc Am Soc Sugar Beet Technol 6:104–107

    Google Scholar 

  • Coe GE, Schneider CL (1966) Selecting sugar beet seedlings for resistance to Aphanomyces cochlioides. J Am Soc Sugar Beet Technol 14:164–167

    Google Scholar 

  • Doxtator CW, Finkner RE (1954) A summary of results in the breeding for resistance to Aphanomyces cochlioides (Drechs) by the American Crystal Sugar Company since 1942. Proc Am Soc Sugar Beet Technol 8(2):94–98

    Google Scholar 

  • Gidner S, Lennesfors B-L, Nilsson N-O, Bensefelt J, Johansson E, Gyllenspetz U, Kraft T (2005) QTL mapping of BNYVV resistance from WB41 source in sugar beet. Genome 48:279–285

    CAS  PubMed  Google Scholar 

  • Grimmer MK, Trybush S, Hanley S, Francis SA, Karp A, Asher MJC (2007) An anchored linkage map for sugar beet based on AFLP, SNP and RAPD markers and QTL mapping of a new source of resistance to Beet necrotic yellow vein virus. Theor Appl Genet 114:1151–1160

    Article  CAS  PubMed  Google Scholar 

  • Hori K, Kobayashi T, Shimizu A, Sato K, Takeda K, Kawasaki S (2003) Efficient construction of high-density linkage map and its application to QTL analysis in barley. Theor Appl Genet 107:806–813

    Article  CAS  PubMed  Google Scholar 

  • Kawaguchi M, Motomura T, Imaizumi-Anraku H, Akao S, Kawasaki S (2001) Providing the basis for genomics in Lotus japonicus: the accessions Miyakojima and Gifu are appropriate crossing partners for genetic analyses. Mol Genet Genomics 266:157–166

    Article  CAS  PubMed  Google Scholar 

  • Kikuchi S, Taketa S, Ichii M, Kawasaki S (2003) Efficient fine mapping of the naked caryopsis gene (nud) by HEGS (High Efficiency Genome Scanning)/AFLP in barley. Theor Appl Genet 108:73–78

    Article  CAS  PubMed  Google Scholar 

  • Kosambi DD (1944) The estimation of map distance. Ann Eugenics 12:505–525

    Google Scholar 

  • Lander ES, Green P, Abrahamson J, Barlow A, Daly M (1987) MAPMAKER: an interactive computer package for constructing primary linkage maps of experimental and natural populations. Genomics 1:174–181

    Article  CAS  PubMed  Google Scholar 

  • Lein CL, Asbach K, Tian Y, Schulte D, Li C, Koch G, Jung C, Cai D (2007) Resistance gene analogues are clustered on chromosome 3 of sugar beet and cosegregate with QTL for Rhizomania resistance. Genome 50:61–71

    Article  CAS  PubMed  Google Scholar 

  • Michelmore RW, Meyers BC (1998) Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process. Genome Res 8:1113–1130

    CAS  PubMed  Google Scholar 

  • Michelmore RW, Paren I, Kesseli RV (1991) Identification of Markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using a segregation population. Proc Natl Acad Sci USA 88:9828–9832

    Article  CAS  PubMed  Google Scholar 

  • Möhring S, Salamini F, Schneider K (2005) Multiplexed, linkage group-specific SNP marker sets for rapid genetic mapping and fingerprinting of sugar beet (Beta vulgaris L.). Mol Breed 14:475–488

    Article  Google Scholar 

  • Okazaki K, Ogata N, Takahashi H, Taguchi K, Nakatsuka K (2005) An artificial inoculation method to evaluate sugar beet breeding line for resistance to Aphanomyces root rot. Proc Am Soc Sugar Beet Technol 33:151–165

    Google Scholar 

  • Panella L (2005) Black root. In: Biancardi E, Campbell L, De Biaggi M, Skaracis GN (eds) Genetics and breeding of sugar beet. Science Publishers, Enfield (NH), Plymouth, pp 101–110

    Google Scholar 

  • Roger SO, Bendich AJ (1988) Extraction of DNA from plant tissues. Plant Mol Biol Manual A6:1–10

    Google Scholar 

  • Schafer-Pregl R, Borchardt DC, Barzen E, Glass C, Mechelke W, Seitzer JF, Salamini F (1999) Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups. Theor Appl Genet 99:829–836

    Article  CAS  Google Scholar 

  • Schneider CL (1954) Methods of inoculating sugar beets with Aphanomyces cochlioides Drechs. Proc Am Soc Sugar Beet Technol 8:247–251

    Google Scholar 

  • Schneider CL (1978) Use of Oospore Inoculum of Aphanomyces cochlioides to initiate black root disease in sugar beet seedlings. J Am Soc Sugar Beet Technol 20:55–62

    Google Scholar 

  • Schneider CL, Whitney ED (1986) Black root. Page 17. In: Whitney ED, Duffus JE (eds) Compendium of beet diseases and insects. American Phytopathological Society, St. Paul, MN

  • Scholten OE, De Bock ThSM, Klein-Lankhorst RM, Lange W (1999) Inheritance of resistance to beet necrotic yellow vein virus in Beta vulgaris, conferred by a second gene for resistance. Theor Appl Genet 99:740–746

    Article  CAS  Google Scholar 

  • Setiawan A, Koch G, Barnes SR, Jung C (2000) mapping quantitative trait loci (QTLs) for resistance to Cercospora leaf spot disease (Cercospora beticola Sacc.) in sugar beet (Beta vulgaris L.). Theor Appl Genet 100:1176–1182

    Article  CAS  Google Scholar 

  • Taguchi K, Ogata N, Kubo T, Kawasaki S, Mikami T (2009) Quantitative trait locus responsible for resistance to Aphanomyces root rot (black root) caused by Aphanomyces cochlioides Drechs. in sugar beet. Theor Appl Genet 118:227–234

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

The authors wish to thank Chiho Tanaka, Sachiko Nishimura and Naoko Yamada for technical assistance. This work was supported in part by the grant from the Ministry of Agriculture, Forestry and Fisheries, Japan, (Research and development projects applied in promoting new Agriculture Forestry and Fisheries policies, No. 18058), and the Program for Promotion of Basic and Applied Research for Innovation in Bio-oriented Industry (BRAIN).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Kazunori Taguchi.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Taguchi, K., Okazaki, K., Takahashi, H. et al. Molecular mapping of a gene conferring resistance to Aphanomyces root rot (black root) in sugar beet (Beta vulgaris L.). Euphytica 173, 409–418 (2010). https://doi.org/10.1007/s10681-010-0153-8

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10681-010-0153-8

Keywords

Navigation