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Interannual variation of reach specific migratory success for Sacramento River hatchery yearling late-fall run Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss)

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Abstract

The release of hatchery reared salmonid smolts is a common management tool aimed at enhancing depleted wild stocks and maintaining fisheries throughout Northern California and the Pacific Northwest. In the Sacramento River watershed, smolts must migrate through the river, delta and estuary in order to successfully reach the Pacific Ocean. Migration success (success defined as apparent survival from one monitor location to another) may vary between species, year and habitat. We released 500 late-fall run Chinook salmon and 500 steelhead smolts in 2009 and 2010 in the Sacramento River (river kilometer 207). Each smolt was implanted with a coded ultrasonic tag, which was detected by an array of over 300 underwater receiver stations deployed throughout the system. Less than 25 % of fish migrated successfully to the Pacific Ocean in both years. We found that reach specific success was greater in the Delta in 2009 (>60 %) than in 2010 (<33 %), whereas this pattern was reversed in the Bay (<57 % in 2009, >75 % in 2010). Identifying the location, timing and causes of smolt mortality can lead to improved management of the resource.

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References

  • Akaike H (1973) Information theory and an extension of the maximum likelihood principle. In: Petrov B, Cazalo F (eds) Proceedings of the second international symposium on information theory. Akademiai Kiado, Budapest, pp 267–281

    Google Scholar 

  • Ammann A, Delaney N, Michel C, MacFarlane R (2011) The effects of surgically implanted acoustic tags on laboratory growth, survival, and swimming performance of hatchery yearling chinook salmon. Environ Biol Fish (this issue)

  • Brandes P, McLain J (2001) Juvenile Chinook salmon abundance, distribution, and survival in the Sacramento-San Joaquin Estuary. Contributions to the biology of Central Valley salmonids 2, 39–138 CA DFG Fish Bull 179

  • Brannon E, Amend D, Cronin M, Lannan J, LaPatra S, McNeil W, Noble R, Smith C, Talbot A, Wedemeyer G, Westers H (2004) The controversy about salmon hatcheries. Fish 29(9):12–31

    Article  Google Scholar 

  • Campos C, Massa D (2010) Lower Yuba river monitoring and evaluation plan: annual rotary screw trapping report October 1, 2007–September 30, 2008. Prepared for the Lower Yuba River accord planning team. September 13, 2010

  • Chapman E, Hearn A, Michel C, Sandstrom P, Ammann A, Thomas M, Singer G, Lindley S, Peterson M, MacFarlane R, Klimley A (2012) Diel movements of outmigrating Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) smolts in the Sacramento/San Joaquin Watershed. Environ Biol Fish (this issue)

  • Dickhoff W, Beckman B, Larsen D, Mahnken C, Schreck C, Sharpe C, Zaugg W (1995) Quality assessment of hatchery- reared spring Chinook salmon smolts in the Columbia River Basin. In: Uses and effects of cultured fish aquatic ecosystems. American Fisheries Society, Bethesda, pp 292–302

  • Fischer A, Hanemann W, Keeler A (1991) Integrating fishery and water resource management: a biological model of a Califronia salmon fishery. J Environ Econ Manag 20:234–261

    Article  Google Scholar 

  • Fulton T (1902) Rate of growth of seas fishes. Sci Invest Fish Div Scotl Rep 20

  • Huntington C, Nehlsen W, Bowers J (1996) A survey of healthy native stocks of anadromous salmonids in the Pacific Northwest and California. Fish 21(3):6–14

    Article  Google Scholar 

  • Kjelson M, Raquel P, Fisher F (1981) The life-history of fall run juvenile Chinook salmon, Oncorhynchus tshawytscha, in the Sacramento San Joaquin Estuary of California. Estuaries 4(3):285–285

    Google Scholar 

  • Kostow K (2009) Factors that contribute to the ecological risks of salmon and steelhead hatchery programs and some mitigating strategies. Rev Fish Biol Fish 19(1):9–31

    Article  Google Scholar 

  • Lacroix G, McCurdy P (2004) Effects of implanted dummy acoustic transmitters on juvenile Atlantic salmon. Trans Am Fish Soc 133(1):211–220

    Article  Google Scholar 

  • MacFarlane RB, Norton EC (2002) Physiological ecology of juvenile Chinook salmon (Oncorhynchus tshawytscha) at the southern end of their distribution, the San Francisco Estaury and Gulf of the Farallones, California. Fish Bull 100(2):244–257

    Google Scholar 

  • Mahnken C, Prentice E, Waknitz W, Monan G, Sims C, Williams J (1982) The application of recent smoltification research to public hatchery releases – an assessment of size time requirements for Columbia River Hatchery Coho salmon (Oncorhynchus kisutch). Aquaculture 28(1–2):251–268

    Article  Google Scholar 

  • Martinelli T, Hansel H, Shively R (1998) Growth and physiological responses to surgical and gastric radio transmitter implantation techniques in subyearling Chinook salmon (Oncorhynchus tshawytscha). Hydrobiologia 371–372:79–87

    Article  Google Scholar 

  • McEwan D (2001) Central Valley Steelhead. Contributions to the biology of Central Valley salmonids, Fish Bull 179 CA DFG

  • Meffe G (1992) Technoarrogance and halfway technologies – Salmon hatcheries on the Pacific Coast of North America. Conserv Biol 6(3):350–354

    Article  Google Scholar 

  • Melnychuk M (2009) Estimation of survival and detection probabilities for multiple tagged salmon stocks with nested migration routes, using a large scale telemetry array. Mar Freshw Res 60(12):1231–1243

    Article  Google Scholar 

  • Melnychuk M, Welch D, Walkters C (2010) Spatio-temporal migration patterns of Pacific Salmon smolts in rivers and coastal marine waters. PLoS One 5:9

    Article  Google Scholar 

  • Moyle P (2002) Inland fishes of California. University of California Press, Berkeley

    Google Scholar 

  • Muir W, Smith S, Williams J, Sandford B (2001) Survival estimates for migrant yearling Chinook salmon and steelhead tagged with passive integrated transponder in the lower Snake and lower Columbia Rivers, 1993–1998. N Am J Fish Manag 21(2):269–282

    Article  Google Scholar 

  • Myers R, Levin S, Lande R, James F, Murdoch W, Paine R (2004) Hatcheries and endangered salmon. Science 303(5666):1980–1980

    Article  PubMed  CAS  Google Scholar 

  • Newman K (2003) Modeling paired release-recovery data in the presence of survival and capture heterogeneity with application to marked juvenile salmon. Stat Model 3(3):157–177

    Article  CAS  Google Scholar 

  • Newman K, Brandes P (2010) Hierarchical modeling of juvenile Chinook salmon survival as a function of Sacramento-San Joaquin Delta water exports. N Am J Fish Manag 30(1):157–169

    Article  Google Scholar 

  • Newman K, Rice J (2002) Modeling the survival of juvenile Chinook salmon smolts outmigrating through the lower Sacramento River system. J Am Stat Assoc 97(460):983–993

    Article  Google Scholar 

  • NMFS (2004) Notices. Fed Regist 69:73

    Google Scholar 

  • Perry R, Skalski J, Brandes P, Sandstrom P, Klimley AP, Ammann A, MacFarlane RB (2010) Estimating survival and migration route probabilities of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta. N Am J Fish Manag 30(1):142–156

    Article  Google Scholar 

  • Quinn T (2005) The behavior and ecology of Pacific salmon and trout. University of Washington Press, Seattle

    Google Scholar 

  • Sandstrom P, Keegan T, Singer G (2012) Survival and movement patterns of Central California Coast native steelhead trout (Oncorhynchus mykiss) in the Napa River. Environ Biol Fish (this issue)

  • Sims C, Ossiander F (1981) Migrations of juvenile Chinook salmon and steelhead in the Snake River, from 1973 to 1979, a research summary. Report to the U.S. Army Corps of Engineers, Contract DACW68-78-0038

  • Smith S, Muir W, Williams J, Skalski J (2002) Factors associated with travel time and survival of migrant yearling Chinook salmon and steelhead in the lower Snake River. N Am J Fish Manag 22(2):385–405

    Article  Google Scholar 

  • USBR (2008) Central Valley Project and State Water Project operations criteria and plan biological assessment. http://usbr.gov/mp/cvo/OCAP/docs/OCAP_BA_2008.pdf Accessed 5 September 2011

  • Welch D, Rechisky E, Melnychuk M, Porter A, Walters C, Clements S, Clemens B, McKinley R, Schrek C (2008) Survival of migrating salmon smolts in larger rivers with and without dams. Plos Biol 6(12):2940–2940

    Article  Google Scholar 

  • Welch D, Melnychuk M, Rechisky E, Porter A, Jacobs M, Ladouceur A, McKinley R, Jackson G (2009) Freshwater and marine migration and survival of endangered Cultus Lake sockeye salmo (Oncorhynchus nerka) smolts using POST, a large-scale acoustic telemetry array. Can J Fish Aquat Sci 66(5):739–750

    Google Scholar 

  • White GC, Burnham KP (1999) Program MARK: survival estimation from populations of marked animals. Bird Study 46(1 supp 1):120–139

    Google Scholar 

  • Yoshiyama R, Fisher F, Moyle P (1998) Historical abundance and decline of Chinook salmon in the Central Valley region of California. N Am J Fish Manag 18(3):487–521

    Article  Google Scholar 

  • Yoshiyama R, Gerstung E, Fisher F, Moyle P (2000) Chinook salmon in the California Central Valley: an assessment. Fish 25(2):6–20

    Article  Google Scholar 

Download references

Acknowledgments

Funding for this project was provided by the San Francisco Bay Long Term Management Study through the San Francisco District of the United States Army Corps of Engineers. This project could not have been completed without the help and support of the following people: Ethan Mora, Mike Thomas, Phil Sandstrom, Cyril Michel, Arnold Ammann, Kurtis Brown, Scott Hamelburg, David Woodbury and members of the California Fish Tracking Consortium.

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Correspondence to Gabriel P. Singer.

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Singer, G.P., Hearn, A.R., Chapman, E.D. et al. Interannual variation of reach specific migratory success for Sacramento River hatchery yearling late-fall run Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) . Environ Biol Fish 96, 363–379 (2013). https://doi.org/10.1007/s10641-012-0037-y

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