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A set of polymorphic dinucleotide and tetranucleotide microsatellite markers for the Indo-Pacific humpback dolphin (Sousa chinensis) and cross-amplification in other cetacean species

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Abstract

Eleven dinucleotide and five tetranucleotide polymorphic microsatellite loci were presented for the Indo-Pacific humpback dolphin Sousa chinensis, a species categorized as ‘data deficiency’ in the IUCN Red List. These markers were developed to allow future population studies, such as characterization of population structure and genetic diversity that are important for the species’ conservation. The number of alleles ranged from 2 to 9 with observed heterozygosity ranging from 0.167 to 0.917, and expected heterozygosity ranging from 0.159 to 0.913. Test of these loci in five additional cetacean species found that 10–13 loci have successful cross-amplifications.

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References

  • Baillie J, Groombridge B (1996) IUCN red list of threatened animals. World Conservation Union, Gland, Switzerland

    Google Scholar 

  • Chen BY, Zhen DM, Zhai FF et al (2008) Abundance, distribution and conservation of Chinese White Dolphins (Sousa chinensis) in Xiamen, China. Mamm Biol 73:56–164

    Article  Google Scholar 

  • Chen L, Bruford M, Yang G (2007) Isolation and characterization of microsatellite loci in the finless porpoise (Neophocaena phocaenoides). Mol Ecol Notes 7:1129–1131

    Article  CAS  Google Scholar 

  • Jefferson TA, Hung SK (2004) A review of the status of the Indo-Pacific humpback dolphin (Sousa chinensis) in Chinese waters. Aquat Mamm 30:49–158

    Google Scholar 

  • Jefferson TA, Karczmarski L (2001) Sousa chinensis. Mamm Species 655:1–9

    Article  Google Scholar 

  • Karczmarski L, Thornton M, Cockcroft VG (2000) Daylight occurrence of humpback dolphins Sousa Chinensis in Algoa Bay, South Africa. Afr J Ecol 38:86–90

    Article  Google Scholar 

  • Marshall TC, Slate J, Kruuk LEB, Pemberton JM (1998) Statistical confidence for likelihood-based paternity inference in natural populations. Mol Ecol 7:639–655

    Article  PubMed  CAS  Google Scholar 

  • Raymond M, Rousset F (2004) GENEPOP (version 3.4): population genetics software for exact tests and ecumenicism. Available at http://wbiomed.curtin.edu.au/genepop/.html

  • Rice WR (1989) Analyzing tables of statistical tests. Evolution 43:223–225

    Article  Google Scholar 

  • Ross GJB, Heinsohn GE, Cockcroft VG (1994) Humpback dolphins Sousa chinensis (Osbeck, 1765), Sousa plumbea (G. Cuvier, 1829) and Sousa teuszii (Kukenthal, 1892). In: Ridgway SH, Harrison R (eds) Handbook of marine mammals, vol 5. San Diego Academic Press, San Diego, pp 23–42

    Google Scholar 

  • Wang JY, Hung SK, Yang SC (2004) Records of Indo-Pacific humpback dolphins, Sousa chinensis (Osbeck, 1765), from the waters of western Taiwan. Aquat Mamm 30:189–196

    Article  Google Scholar 

  • Zhou KY, Xu XR, Tian C (2007) Distribution and abundance of Indo-Pacific humpback dolphins in Leizhou Bay, China. New Zealand J Zool 34:35–42

    CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by the National Natural Science Foundation of China grant nos 30670294 and 30470253, the Program for New Century Excellent Talents in University (NCET-07-0445), the Ministry of Education of China, the Specialized Research Fund for the Doctoral Program of Higher Education (SRFDP 20060319002), the Ministry of Education of China, and the Major Project for Basic Researches of Jiangsu Province Universities (07KJA18016). We thank Prof. Kaiya Zhou, Mr Anli Gao and Xin-Rong Xu for their assistance and contribution to collecting samples for many years.

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Correspondence to Guang Yang.

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Chen, L., Yang, G. A set of polymorphic dinucleotide and tetranucleotide microsatellite markers for the Indo-Pacific humpback dolphin (Sousa chinensis) and cross-amplification in other cetacean species. Conserv Genet 10, 697–700 (2009). https://doi.org/10.1007/s10592-008-9618-x

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  • DOI: https://doi.org/10.1007/s10592-008-9618-x

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