Skip to main content
Log in

Isolation and charaterization of polymorphic microsatellite loci from so-iuy mullet (Mugil soiuy Basilewsky 1855)

  • Technical Note
  • Published:
Conservation Genetics Aims and scope Submit manuscript

Abstract

The first set of polymorphic microsatellite markers were developed from so-iuy mullet (Mugil soiuy Basilewsky 1855). From a (GT)n-enriched genomic library, 53 microsatellites were selected for designing microsatellite primers, of which 36 gave working primer pairs. Ten of these loci were polymorphic in a test population of 24 individuals with alleles ranging from 3 to 9, and observed and expected heterozygosities from 0.2083 to 0.9167 and from 0.2651 to 0.8812, respectively. No significant linkage disequilibrium between pairs of loci was found, but two loci significantly deviated from Hardy–Weinberg equilibrium after Bonferroni correction. These polymorphic microsatellite loci should provide sufficient level of genetic diversity to investigate the fine-scale population structure and evaluate the breeding strategy in Mullet.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  • Chen SL, Liu YG, Xu MY, Li J (2005) Isolation and characterization of polymorphic microsatellite loci from an EST-library of red sea bream (Chrysophrys major) and cross-species amplification. Mol Ecol Notes 5:215–217

    Article  CAS  Google Scholar 

  • Lei JL (1979) The developmental stages of mullet Mugil soiuy Basilewsky. Acta Oceanol Sin 1:157–175 (in Chinese with English abstract)

    Google Scholar 

  • Liao X, Wang D, Yu X, Li W, Cheng L, Wang J, Tong J (2007) Characterization of novel microsatellite loci in rare minnow (Gobiocypris rarus) and amplification in closely related species in Gobioninae. Conserv Genet 8:1003–1007

    Article  CAS  Google Scholar 

  • Li MD (1992) Biology and aquaculture of Mullet. Nankai University Press, Tianjin, China (in Chinese)

    Google Scholar 

  • Li A, Hu J, Zhang Z, Yang M (2006) Quantitative real-time RT-PCR for determination of vitellogenin mRNA in so-iuy mullet (Mugil soiuy). Anal Bioanal Chem 386:1995–2001

    Article  Google Scholar 

  • Liu YG, Chen SL, Li BF (2004) Assessing the genetic structure of three Japanese flounder (Paralichthys olivaceus) stocks by microsatellite markers. Aquaculture 243:103–111

    Article  Google Scholar 

  • Masuda H, Amaoka K, Araga C, Uyeno T, Yoshino T (1984) The fishes of the Japanese Archipelago. Tokai Univ Press, Tokyo, Japan, p 119

    Google Scholar 

  • Meng W, Gao T, Zheng B (2007) Genetic analysis of four populations of redlip Mullet (Chelon haematocheilus) collected in China seas. J Ocean Univ China 6:72–75 (in Chinese with English abstract)

    Article  CAS  Google Scholar 

  • Quan JX, Dai JX, Shen SD, Deng JY, Zhuang ZM (2000) Genetic variation analysis of two mullet populations through randomly amplified polymorphic DNA (RAPD) method. Acta Oceanol Sin 22:82–87 (in Chinese with English abstract)

    CAS  Google Scholar 

  • Rice WR (1989) Analyzing tables of statistical tests. Evolution 43:223–225

    Article  Google Scholar 

  • Rozen S, Skaletsky HJ (2000) Primer 3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, NJ, pp 365–386

    Google Scholar 

  • Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite. Mol Ecol Notes 4:535–538

    Article  Google Scholar 

  • Yeh FC, Boyle TJB (1997) Population genetic analysis of co-dominant and dominant markers and quantitative traits. Belg J Bot 129:157

    Google Scholar 

  • Yoshimatsu T, Matsui S, Kitajima C (1992) Early development of laboratory-reared redlip mullet, Liza haematocheila. Aquaculture 105:379–390

    Article  Google Scholar 

  • Zane L, Bargelloni L, Patarnello T (2002) Strategies for microsatellite isolation: a review. Mol Ecol 11:1–16

    Article  PubMed  CAS  Google Scholar 

  • Zhu YD, Zhang CL, Cheng QT (1963) Fishes of the East China Sea. Science Press, Beijing (in Chinese with English abstract)

    Google Scholar 

Download references

AcknowledgementS

We are grateful to Mr. Hao Ding for his assistance with this work, and this study was supported by State 863 High-technology R&D project of China (2006AA10A403), Taishan Scholar Project of Shandong Province, and scientific foundation of YSFRI, CAFS (2007-qn-13).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Songlin Chen.

Additional information

Genbo Xu and Changwei Shao Contributed equally.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Xu, G., Shao, C., Liao, X. et al. Isolation and charaterization of polymorphic microsatellite loci from so-iuy mullet (Mugil soiuy Basilewsky 1855). Conserv Genet 10, 653–655 (2009). https://doi.org/10.1007/s10592-008-9602-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10592-008-9602-5

Keywords

Navigation