Abstract
Precision treatment for breast cancers has made several notable advances in recent decades, but challenges of tumor heterogeneity, drug resistance, and aggressive recurrence and metastases remain. To meet and overcome these challenges, we must refine our understanding of breast subtypes and treatment biomarkers according to the knowledge afforded across the spectrum of ‘omics assays. A critical aspect of harnessing this knowledge into actionable biomarkers for treatment decision relies on our ability to integrate knowledge across data types and leverage our insight in evidence-based clinical trials. We review recent advances in cutting-edge clinical trials for precision treatment of breast cancer, including chemotherapies, targeted therapies, immunotherapies, and combination therapies. We comment on promising future areas of development for this exciting point in precision breast cancer research.
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Abbreviations
- AKT1:
-
AKT serine/threonine kinase 1
- ATM:
-
Ataxia telangiesctasia mutated serine/threonine kinase
- ATR:
-
Ataxia telangiesctasia and rad3-related protein
- BRCA1:
-
BRCA1 DNA repair associated
- BRCA2:
-
BRCA2 DNA repair associated
- CHK1:
-
Checkpoint kinase 1
- CHK2:
-
Checkpoint kinase 2
- CLIA:
-
Clinical laboratory improvement act
- ctDNA:
-
Circulating tumor DNA
- ER:
-
Estrogen receptor 1
- HR+:
-
Hormone receptor positive
- HER2:
-
Human epidermal growth factor receptor 2
- MSI:
-
Microsatellite instability
- PARP1:
-
Poly(ADP-Ribose) polymerase
- PTEN:
-
Phosphatase and tensin homolog
- TNBC:
-
Triple negative breast cancer
- WEE1:
-
WEE1 G2 checkpoint kinase
References
Cancer Genome Atlas Network (2012) Comprehensive molecular portraits of human breast tumours. Nature 490(7418):61–70
Nik-Zainal S, Davies H, Staaf J, Ramakrishna M, Glodzik D, Zou X et al (2016) Landscape of somatic mutations in 560 breast cancer whole-genome sequences. Nature 534(7605):47–54
Jiang Y-Z, Ma D, Suo C, Shi J, Xue M, Hu X et al (2019 Mar) Genomic and transcriptomic landscape of triple-negative breast cancers: subtypes and treatment strategies. Cancer Cell 35(3):428-440.e5
Zardavas D, Maetens M, Irrthum A, Goulioti T, Engelen K, Fumagalli D et al (2014 Nov) The AURORA initiative for metastatic breast cancer. Br J Cancer 111(10):1881–7
Brown D, Smeets D, Székely B, Larsimont D, Szász AM, Adnet P-Y et al (2017 Apr 28) Phylogenetic analysis of metastatic progression in breast cancer using somatic mutations and copy number aberrations. Nat Commun 8(1):14944
De Mattos-Arruda L, Sammut S-J, Ross EM, Bashford-Rogers R, Greenstein E, Markus H et al (2019) The genomic and immune landscapes of lethal metastatic breast cancer. Cell Rep 27(9):2690–2708
Moasser MM (2007 Oct 4) The oncogene HER2: its signaling and transforming functions and its role in human cancer pathogenesis. Oncogene 26(45):6469–87
Wilson FR, Coombes ME, Wylie Q, Yurchenko M, Brezden-Masley C, Hutton B et al (2017) Herceptin® (trastuzumab) in HER2-positive early breast cancer: protocol for a systematic review and cumulative network meta-analysis. Syst Rev 6(1):196
Early Breast Cancer Trialists’ Collaborative Group (1988) Effects of adjuvant tamoxifen and of cytotoxic therapy on mortality in early breast cancer. An overview of 61 randomized trials among 28,896 women. N Engl J Med 319(26):1681–1692
Redman MW, Allegra CJ (2015 Oct) The master protocol concept. Semin Oncol 42(5):724–30
Hirakawa A, Asano J, Sato H, Teramukai S (2018 Dec) Master protocol trials in oncology: review and new trial designs. Contemp Clin Trials Commun 12:1–8
Esserman LJ, Berry DA, DeMichele A, Carey L, Davis SE, Buxton M et al (2012) Pathologic complete response predicts recurrence-free survival more effectively by cancer subset: results from the I-SPY 1 TRIAL–CALGB 150007/150012, ACRIN 6657. J Clin Oncol Off J Am Soc Clin Oncol 30(26):3242–9
Barker AD, Sigman CC, Kelloff GJ, Hylton NM, Berry DA, Esserman LJ (2009) I-SPY 2: an adaptive breast cancer trial design in the setting of neoadjuvant chemotherapy. Clin Pharmacol Ther 86(1):97–100
Davies H, Glodzik D, Morganella S, Yates LR, Staaf J, Zou X et al (2017) HRDetect is a predictor of BRCA1 and BRCA2 deficiency based on mutational signatures. Nat Med 23(4):517–25
Peng G, Chun-Jen Lin C, Mo W, Dai H, Park Y-Y, Kim SM et al (2014) Genome-wide transcriptome profiling of homologous recombination DNA repair. Nat Commun 5(1):3361
McGrail DJ, Lin CC-J, Garnett J, Liu Q, Mo W, Dai H et al (2017) Improved prediction of PARP inhibitor response and identification of synergizing agents through use of a novel gene expression signature generation algorithm. Npj Syst Biol Appl 3(1):8
Pitt JM, Vétizou M, Daillère R, Roberti MP, Yamazaki T, Routy B et al (2016) Resistance mechanisms to immune-checkpoint blockade in cancer: tumor-intrinsic and -extrinsic factors. Immunity 44(6):1255–69
Chang C-H, Pearce EL (2016) Emerging concepts of T cell metabolism as a target of immunotherapy. Nat Immunol 17(4):364–8
Pauken KE, Sammons MA, Odorizzi PM, Manne S, Godec J, Khan O et al (2016) Epigenetic stability of exhausted T cells limits durability of reinvigoration by PD-1 blockade. Science 354(6316):1160–5
Haddad R, Saldanha-Araujo F (2014) Mechanisms of T-cell immunosuppression by mesenchymal stromal cells: what do we know so far? BioMed Res Int 2014:216806
Stromnes IM, Greenberg PD, Hingorani SR (2014 Oct 15) Molecular pathways: myeloid complicity in cancer. Clin Cancer Res Off J Am Assoc Cancer Res 20(20):5157–70
Chou CK, Schietinger A, Liggitt HD, Tan X, Funk S, Freeman GJ et al (2012) Cell-intrinsic abrogation of TGF-β signaling delays but does not prevent dysfunction of self/tumor-specific CD8 T cells in a murine model of autochthonous prostate cancer. J Immunol Baltim Md 1950 89(8):3936–3946
Soliman H, Rawal B, Fulp J, Lee J-H, Lopez A, Bui MM et al (2013) Analysis of indoleamine 2–3 dioxygenase (IDO1) expression in breast cancer tissue by immunohistochemistry. Cancer Immunol Immunother CII 62(5):829–37
Kuol N, Stojanovska L, Apostolopoulos V, Nurgali K (2018 Feb) Crosstalk between cancer and the neuro-immune system. J Neuroimmunol 15(315):15–23
Gajewski TF, Schreiber H, Fu Y-X (2013) Innate and adaptive immune cells in the tumor microenvironment. Nat Immunol 14(10):1014–22
Whiteside TL (2008 Oct 6) The tumor microenvironment and its role in promoting tumor growth. Oncogene. 27(45):5904–12
Berger AC, Korkut A, Kanchi RS, Hegde AM, Lenoir W, Liu W et al (2018) A comprehensive pan-cancer molecular study of gynecologic and breast cancers. Cancer Cell 33(4):690-705.e9
Olivier M, Asmis R, Hawkins GA, Howard TD, Cox LA (2019 Sep 26) The need for multi-omics biomarker signatures in precision medicine. Int J Mol Sci 20(19):4781
Mitri ZI, Parmar S, Johnson B, Kolodzie A, Keck JM, Morris M et al (2018) Implementing a comprehensive translational oncology platform: from molecular testing to actionability. J Transl Med 16(1):358
Prasad V (2016) Perspective: the precision-oncology illusion. Nature 537(7619):S63
Meric-Bernstam F, Brusco L, Shaw K, Horombe C, Kopetz S, Davies MA et al (2015) Feasibility of large-scale genomic testing to facilitate enrollment onto genomically matched clinical trials. J Clin Oncol Off J Am Soc Clin Oncol 33(25):2753–62
Flaherty KT, Gray R, Chen A, Li S, Patton D, Hamilton SR et al (2020) The molecular analysis for therapy choice (NCI-MATCH) trial: lessons for genomic trial design. J Natl Cancer Inst 112(10):1021–9
Ng PK-S, Li J, Jeong KJ, Shao S, Chen H, Tsang YH et al (2018) Systematic functional annotation of somatic mutations in cancer. Cancer Cell 33(3):450–462
Tsang YH, Dogruluk T, Tedeschi PM, Wardwell-Ozgo J, Lu H, Espitia M et al (2016) Functional annotation of rare gene aberration drivers of pancreatic cancer. Nat Commun 25(7):10500
Ellsworth RE, Blackburn HL, Shriver CD, Soon-Shiong P, Ellsworth DL (2017) Molecular heterogeneity in breast cancer: State of the science and implications for patient care. Semin Cell Dev Biol 64:65–72
Turashvili G, Brogi E (2017) Tumor heterogeneity in breast cancer. Front Med 4:227
Pectasides E, Stachler MD, Derks S, Liu Y, Maron S, Islam M et al (2018) Genomic heterogeneity as a barrier to precision medicine in gastroesophageal adenocarcinoma. Cancer Discov 8(1):37–48
Ward HW (1973 Jan 6) Anti-oestrogen therapy for breast cancer: a trial of tamoxifen at two dose levels. Br Med J 1(5844):13–4
Lerner HJ, Band PR, Israel L, Leung BS (1976) Phase II study of tamoxifen: report of 74 patients with stage IV breast cancer. Cancer Treat Rep 60(10):1431–5
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Presented at the 8th International Cancer Metastasis Congress in San Francisco, CA, USA from October 25–27, 2019 (http://www.cancermetastasis.org). To be published in an upcoming Special Issue of Clinical and Experimental Metastasis: Novel Frontiers in Cancer Metastasis.
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Blucher, A.S., Mills, G.B. & Tsang, Y.H. Precision oncology for breast cancer through clinical trials. Clin Exp Metastasis 39, 71–78 (2022). https://doi.org/10.1007/s10585-021-10092-0
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DOI: https://doi.org/10.1007/s10585-021-10092-0