Abstract
In this study, 16 hairpin RNA (hpRNA) vectors were constructed, each harboring 50 bp viral RNA sequence as the stem. They all targeted the coat protein (CP) gene of Potato virus Y (PVY). Virus resistance assay revealed that hairpin constructs targeting the anterior 200 bp regions of the CP gene were unable to induce virus resistance, while the 12 hpRNA constructs targeting posterior 600 bp regions induced high virus resistance up to 77.78 %. Northern blot analysis revealed that 50 bp-length hpRNA constructs could be transcribed efficiently and processed into siRNAs; however, no correlation between siRNA accumulation and degree of antiviral defense was observed. Results presented here indicated that the middle and 3′ end of the CP cDNA was important for hpRNA-mediated PVY resistance, improving the design of pathogen-derived hpRNA expression cassettes for transgenic plant against viruses.
Similar content being viewed by others
Abbreviations
- CaMV:
-
cauliflower mosaic virus
- CB:
-
carbenicillin
- CP:
-
coat protein
- dpi:
-
day post-inoculation
- dsRNA:
-
double strand RNA
- hpRNA:
-
hairpinRNA
- PTGS:
-
post-transcriptional gene silencing
- PVY:
-
Potato virus Y
- SSC:
-
sodium chloride/sodium citrate
References
Abhary, M.K., Anfoka, G.H., Nakhla, M.K., Maxwell, D.P.: Post-transcriptional gene silencing in controlling viruses of the tomato yellow leaf curl virus complex. — Arch. Virol. 151: 2349–2363, 2006.
Almeida, R., Allshire, R.C.: RNA silencing and genome regulation. — Trends Cell Biol. 15: 251–258, 2005.
Bernstein, E., Caudy, A.A., Hammond, S.M., Hannon, G.J.: Role for a bidentate ribonuclease in the initiation step of RNA interference. — Nature 409: 363–366, 2001.
Bhattacharjee, B., Mohan, M., Nair, S.: Transformation of chickpea: effect of genotype, explant, Agrobacterium-strain and composition of culture medium. — Biol. Plant. 54: 21–32, 2010.
Burundukova, O.L., Sapotsky, M.V., Kochetov, A.V., Trifonova, E.A., Malinovsky, V.I.: Dark and light green tissues of tobacco leaves systemically infected with tobacco mosaic virus. — Biol. Plant. 53: 294–300, 2009.
Duan, C.G., Wang, C.H., Fang, R.X., Guo, H.S.: Artificial microRNAs highly accessible to targets confr efficient virus resistance in plants. — J. Virol. 82: 11084–11095, 2008.
Helliwell, C., Waterhouse, P.: Constructs and methods for high-throughput gene silencing in plants. — Methods 30: 289–295, 2003.
Holen, T., Amarzguioui, M., Wiiger, M.T., Babaie, E., Prydz, H.: Positional effects of short interfering RNAs targeting the human coagulation trigger tissue factor. — Nucl. Acids Res. 30: 1757–1766, 2002.
Horsch, R.B., Fry, J.E., Hoffman, N.L., Eichholz, D., Rogers, S.G., Fraley, R.T.: A simple and general method for transforming genes into plants. — Science 227: 1229–1231, 1985.
Kertbundit, S., Pongtanom, N., Ruanjan, P., Chantasingh, D., Tanwanchai, A., Panyim, S., Juricek, M.: Resistance of transgenic papaya plants to papaya ringspot virus. — Biol. Plant. 51: 333–339, 2007.
Li, P., Song, Y.Z., Liu, X.L., Zhu, C.X., Wen, F.J.: Study of virus resistance mediated by inverted repeats derived from 5′ and 3′ ends of coat protein gene of Potato virus Y. — Acta phytopathol. sin. 37: 69–72, 2007.
Liu, Z.Z., Wang, J.L., Huang, X., Xu, W.H., Liu, Z.M., Fang, R.X.: The promoter of a rice glycine-rich protein gene, Osgrp-2, confers vascular-specific expression in transgenic plants. — Planta 216: 824–833, 2003.
Luo, K.Q., Chang, D.C.: The gene-silencing efficiency of siRNA is strongly dependent on the local structure of mRNA at the targeted region. — Biochem. Biophys. Res. Commun. 318: 303–310, 2004.
Missiou, A., Kalantidis, K., Boutla, A., Tzortzakaki, S., Tabler, M., Tsagris, M.: Generation of transgenic potato plants highly resistant to potato virus Y (PVY) through RNA silencing. — Mol. Breed 14: 185–197, 2004.
Mohanpuria, P., Rana, N.K., Yadav, S.K.: Transient RNAi based gene silencing of glutathione synthetase reduces glutathione content in Camellia sinensis (L.) O. Kuntze somatic embryos. — Biol. Plant. 52: 381–384, 2008.
Nykänen, A., Haley, B., Zamore, P.D.: ATP requirements and small interfering RNA structure in the RNA interference pathway. — Cell 107: 309–321, 2001.
Overhoff, M., Alken, M., Far, R.K., Lemaitre, M., Lebleu, B., Sczakiel, G., Robbins, I.: Local RNA target structure influences siRNA efficacy: a systematic global analysis. — J. mol. Biol. 348: 871–881, 2005.
Prins, M., Goldbach, R.: RNA-mediated virus resistance in transgenic plants. — Arch. Virol. 141: 2259–2276, 1996.
Sambrook, J., Russell, D.W.: Molecular Cloning: a Laboratory Manual. — Cold Spring Harbour Laboratory Press, New York 2001.
Sanford, J.C., Johnson, S.A.: The concept of parasite-derived resistance: deriving resistance genes from the parasite own genome. — J. theor. Biol. 115: 395–405, 1985.
Schubert, S., Grünweller, A., Erdmann, V.A., Kurreck, J.: Local RNA target structure influences siRNA efficacy: systematic analysis of intentionally designed binding regions. — J. mol. Biol. 348: 883–893, 2005.
Smith, N.A., Singh, S.P., Wang, M.B., Stoutjesdijk, P.A., Green, A.G., Waterhouse, P.M.: Gene expression: total silencing by intron-spliced hairpin RNAs. — Nature 407: 319–320, 2000.
Stoutjesdijk, P.A., Singh, S.P., Liu, Q., Hurlstone, C.J., Waterhouse, P.A., Green, A.G.: Hp-RNA-mediated targeting of the Arabidopsis FAD2 gene gives highly efficient and stable silencing. — Plant Physiol. 129: 1723–1731, 2002.
Tomita, R., Hamada, T., Horiguchi, G., Iba, K., Kodama, H.: Transgene overexpression with cognate small interfering RNA in tobacco. — FEBS Lett. 573: 117–120, 2004.
Urcuqui-Inchima, S., Haenni, A.L., Bernardi, F.: Potyvirus proteins: a wealth of functions. — Virus Res. 74: 157–175, 2001.
Vickers, T.A., Koo, S., Bennett, C.F., Crooke, S.T., Dean, N.M., Baker, B.F.: Efficient reduction of target RNAs by small interfering RNA and RNase H-dependent antisense agents. — J. biol. Chem. 278: 7108–7118, 2003.
Wesley, S.V., Helliwell, C.A., Smith, N.A., Wang, M.B., Rouse, D.T., Liu, Q., Gooding, P.S., Singh, S.P., Abbott, D., Stoutjesdijk, P.A., Robinson, S.P., Gleave, A.P., Green, A.G., Waterhouse, P.M.: Construct design for efficient, effective and high throughput gene silencing in plants. — Plant J. 27: 581–590, 2001.
Yoshinari, K., Miyagishi, M., Taira, K.: Effects on RNAi of the tight structure, sequence and position of the targeted region. — Nucl. Acids Res. 32: 691–699, 2004.
Zamore, P.D.: Ancient pathways programmed by small RNAs. — Science 296: 1265–1269, 2002.
Acknowledgments
This work was financially supported in part by the National Natural Science Foundation of China (No. 30771408). The first two authors equally participated on the paper.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Jiang, F., Wu, B., Zhang, C. et al. Special origin of stem sequence influence the resistance of hairpin expressing plants against PVY. Biol Plant 55, 528–535 (2011). https://doi.org/10.1007/s10535-011-0119-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10535-011-0119-2