Abstract
The sub-discipline of biodiversity and ecosystem functioning (BEF) has emerged as a central topic in contemporary ecological research. However, to date no study has evaluated the prominence and publication biases in BEF research. Herein we report the results of a careful quantitative assessment of BEF research published in five core general ecology journals from 1990 to 2007 to determine the position of BEF research within ecology, identify patterns of research effort within BEF research, and discuss their probable proximal and historical causes. The relative importance of BEF publications increased exponentially during the period analyzed and was significantly greater than the average growth of ecological literature, affirming the prominence of BEF as a current paradigm in ecology. However, BEF research exhibited a strong bias toward experimental studies on terrestrial plant communities, with significantly lower effort devoted to the functional aspects of biodiversity in aquatic systems, multiple trophic level systems, and animal or microbial communities. Such trends may be explained by a combination of methodological adequacy and historic epistemological differences in ecological thinking. We suggest that BEF researchers should direct more effort toward the study of aquatic systems and animal communities, emphasize long-term and trophically complex experiments, such as those with multi-trophic microbial communities, employ larger-scale field observational studies and increase the use of integrative and theoretical studies. Many technical and analytical methodologies that are already employed in ecological research, such as stable isotopes, paleobiology, remote sensing, and model selection criteria, can facilitate these aims. Overcoming the above-mentioned shortcomings of current BEF research will greatly improve our ability to predict how biodiversity loss will affect ecosystem processes and services in natural ecosystems.
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References
Balvanera P, Pfisterer AB, Buchmann N et al (2006) Quantifying the evidence for biodiversity effects on ecosystem functioning and services. Ecol Lett 9:1146–1156
Barot S, Blouin M, Fontaine S et al (2007) A tale of four stories: soil ecology, theory, evolution and the publication system. Plos One 11:e1248
Bengtsson J (1998) Which species? What kind of diversity? Which ecosystem function? Some problems in studies of relations between biodiversity and ecosystem function. Appl Soil Ecol 10:191–199
Benton TG, Solan M, Travis JMJ et al (2007) Microcosm experiments can inform global ecological problems. Trends Ecol Evol 22:516–521
Bohannan BJM, Hughes J (2003) New approaches to analyzing microbial biodiversity data. Curr Opin Microbiol 6:282–287
Bracken MES, Stachowicz JJ (2006) Seaweed diversity enhances nitrogen uptake via complementary use of nitrate and ammonium. Ecology 87:2397–2403
Budilova EV, Drogalina JA, Teriokhin AT (1997) Principal trends in modern ecology and its mathematical tools: an analysis of publications. Scientometrics 39:147–157
Caliman A, Leal JJF, Esteves FA, Carneiro LS, Bozelli RL, Farjalla VF (2007) Functional bioturbator diversity enhances benthic-pelagic processes and properties in experimental microcosms. J North Am Benthol Soc 26:450–459
Cardinale BJ, Srivastava DS, Duffy JE et al (2006) Effects of biodiversity on the functioning of trophic groups and ecosystems. Nature 443:989–992
Cardinale BJ, Wrigh JP, Cadotte MW et al (2007) Impacts of plant diversity on biomass production increase through time because of species complementarity. Proc Natl Acad Sci USA 104:18123–18128
Carpenter SR, Cole JJ, Hodgson JR et al (2001) Trophic cascades, nutrients, and lake productivity: whole-lake experiments. Ecol Monogr 71:163–186
Chambers JQ, Asner GP, Morton DC et al (2007) Regional ecosystem structure and function: ecological insights from remote sensing of tropical forests. Trends Ecol Evol 22:414–423
Chapin FS, Walker BH, Hobbs RJ et al (1997) Biotic control over the functioning of ecosystems. Science 277:500–504
Chapin FS, Zavaleta ES, Eviner VT et al (2000) Consequences of changing biodiversity. Nature 405:234–242
Cole JJ, Caraco NF (2001) Carbon in catchments: connecting terrestrial carbon losses with aquatic metabolism. Mar Fresh Resear 52:101–110
Darwin C (1859) The origin of species by means of natural selection or the preservation of favored races in the struggle for life. The modern library, New York
De Meester L, Declerck S, Stoks R et al (2005) Ponds and pools as model systems in conservation biology, ecology and evolutionary biology. Aquat Conserv 15:715–725
Dudgeon D, Arthington AH, Gessner MO et al (2006) Freshwater biodiversity: importance, threats, status and conservation challenges. Biol Rev 81:163–182
Duffy JE (2002) Biodiversity and ecosystem function: the consumer connection. Oikos 99:201–219
Duffy JE (2009) Why biodiversity is important to the functioning of real-world ecosystems. Front Ecol Environ. doi:10.1890/070195
Duffy JE, Cardinale BJ, France KE et al (2007) The functional role of biodiversity in ecosystems: incorporating trophic complexity. Ecol Lett 10:522–538
Emmerson M, Huxham M (2002) How can marine ecology contribute to the biodiversity-ecosystems functioning debate? In: Loreau M, Naeem S, Inchausti P (eds) Biodiversity and ecosystem functioning: synthesis and perspectives. Oxford University Press, New York, pp 139–146
Emmerson MC, Solan M, Emes C et al (2001) Consistent patterns and the idiosyncratic effects of biodiversity in marine ecosystems. Nature 411:73–77
Forbes S (1887) The lake as a microcosm. Bull Scient Assoc (Peoria, IL) 1887:77–87
France KE, Duffy JE (2006) Diversity and dispersal interactively affect predictability of ecosystem function. Nature 441:1139–1143
Gessner MO, Inchausti P, Persson L et al (2004) Biodiversity effects on ecosystem functioning: insights from aquatic systems. Oikos 104:419–422
Giller PS, Hillebrand H, Berninger UG et al (2004) Biodiversity effects on ecosystem functioning: emerging issues and their experimental test in aquatic environments. Oikos 104:423–436
Graham MH, Dayton PK (2002) On the evolution of ecological ideas: paradigms and scientific progress. Ecology 83:1481–1489
Gurevitch J, Hedges LV (1999) Statistical issues in ecological meta-analyses. Ecology 80:1142–1149
Hooper DU, Chapin FS, Ewel JJ et al (2005) Effects of biodiversity on ecosystem functioning: a consensus of current knowledge. Ecol Monogr 75:3–35
Huston MA (1997) Hidden treatments in ecological experiments: re-evaluating the ecosystem function of biodiversity. Oecologia 110:449–460
Huston MA, McBride AC (2002) Evaluating the relative strengths of biotic versus abiotic controls on ecosystem processes. In: Loreau M, Naeem S, Inchausti P (eds) Biodiversity and ecosystem functioning: synthesis and perspectives. Oxford University Press, New York, pp 47–60
Ives AR, Cardinale BJ (2004) Food-web interactions govern the resistance of communities after non-random extinctions. Nature 429:174–177
Jackson JBC, Johnson KG (2001) Paleoecology—measuring past biodiversity. Science 293:2401
Jessup CM, Kassen R, Forde SE et al (2004) Big questions, small worlds: microbial model systems in ecology. Trends Ecol Evol 19:189–197
Johnson JB, Omland KS (2004) Model selection in ecology and evolution. Trends Ecol Evol 19:101–108
Kahmen A, Renker C, Unsicker SB et al (2006) Niche complementarity for nitrogen: an explanation for the biodiversity and ecosystem functioning relationship? Ecology 87:1244–1255
Kiessling W (2005) Long-term relationships between ecological stability and biodiversity in Phanerozoic reefs. Nature 433:410–413
Kumari L (2006) Trends in synthetic organic chemistry research. Cross-country comparison of Activity Index. Scientometrics 67:467–476
Lawton JH (1996) Patterns in ecology. Oikos 75:145–147
Layman CA, Post DM (2008) Can stable isotope ratios provide for community-wide measures of trophic structure? Reply. Ecology 89:2358–2359
Leibold MA, Holyoak M, Mouquet N et al (2004) The metacommunity concept: a framework for multi-scale community ecology. Ecol Lett 7:601–613
Likens GE, Bormann FH, Johnson NM et al (1970) Effects of forest cutting and herbicide treatment on nutrient budgets in Hubbard Brook watershed-ecosystem. Ecol Monogr 40:23
Loreau M, Naeem S, Inchausti P et al (2001) Ecology—biodiversity and ecosystem functioning: current knowledge and future challenges. Science 294:804–808
Loreau M, Mouquet N, Holt RD (2003) Meta-ecosystems: a theoretical framework for a spatial ecosystem ecology. Ecol Lett 6:673–679
McIntyre PB, Jones LE, Flecker AS et al (2007) Fish extinctions alter nutrient recycling in tropical freshwaters. Proc Natl Acad Sci USA 104:4461–4466
Moustakas A, Karakassis I (2005) How diverse is aquatic biodiversity research? Aquat Ecol 39:367–375
Naeem S (2002) Ecosystem consequences of biodiversity loss: the evolution of a paradigm. Ecology 83:1537–1552
Naeem S (2006) Expanding scales in biodiversity-based research: challenges and solutions for marine systems. Mar Ecol Prog Ser 311:273–283
Naeem S, Wright JP (2003) Disentangling biodiversity effects on ecosystem functioning: deriving solutions to a seemingly insurmountable problem. Ecol Lett 6:567–579
Naeem S, Loreau M, Inchausti P (2002) Biodiversity and ecosystem functioning: the emergence of a synthetic ecological framework. In: Loreau M, Naeem S, Inchausti P (eds) Biodiversity and ecosystem functioning: synthesis and perspectives. Oxford University Press, New York, pp 3–11
Nobis M, Wohlgemuth T (2004) Trend words in ecological core journals over the last 25 years (1978–2002). Oikos 106:411–421
Petchey OL, Gaston KJ (2007) Dendrograms and measuring functional diversity. Oikos 116:1422–1426
Petchey OL, Downing AL, Mittelbach GG et al (2004) Species loss and the structure and functioning of multitrophic aquatic systems. Oikos 104:467–478
Purvis A, Agapow PM, Gittleman JL et al (2000) Nonrandom extinction and the loss of evolutionary history. Science 288:328–330
Raffaelli D (2006) Biodiversity and ecosystem functioning: issues of scale and trophic complexity. Mar Ecol Prog Ser 311:285–294
Raffaelli D, Van der Putten WH, Persson L (2002) Multi-trophic dynamics and ecosystem processes. In: Loreau M, Naeem S, Inchausti P et al (eds) Biodiversity and ecosystem functioning: synthesis and perspectives. Oxford University Press, New York, pp 147–154
Raffaelli D, Emmerson M, Solan M et al (2003) Biodiversity and ecosystem processes in shallow coastal waters: an experimental approach. J Sea Res 49:133–141
Saikkonen K, Lehtonen P, Helander M et al (2006) Model systems in ecology: dissecting the endophyte-grass literature. Trends Plant Sci 11:428–433
Sala OE, Chapin FS, Armesto JJ et al (2000) Biodiversity—global biodiversity scenarios for the year 2100. Science 287:1770–1774
Schmid B, Hector A (2004) The value of biodiversity experiments. Basic Appl Ecol 5:535–542
Schulze ED, Mooney HA (1994) Biodiversity and ecosystem function. Springer-Verlag, Berlin
Solan M, Cardinale BJ, Downing AL et al (2004) Extinction and ecosystem function in the marine benthos. Science 306:1177–1180
Srivastava DS, Vellend M (2005) Biodiversity-ecosystem function research: is it relevant to conservation? Annu Rev Ecol Evol Syst 36:267–294
Srivastava DS, Kolasa J, Bengtsson J et al (2004) Are natural microcosms useful model systems for ecology? Trends Ecol Evol 19:379–384
Srivastava DS, Cardinale BJ, Downing JE et al (2009) Diversity has stronger top-down than bottom-effect effects on decomposition. Ecology 90:1073–1083
Symstad AJ, Chapin FS, Wall DH et al (2003) Long-term and large-scale perspectives on the relationship between biodiversity and ecosystem functioning. Bioscience 53:89–98
Tilman D (1999) The ecological consequences of changes in biodiversity: a search for general principles. Ecology 80:1455–1474
Vitousek PM, Mooney HA, Lubchenco J et al (1997) Human domination of Earth’s ecosystems. Science 277:494–499
Wardle DA (1999) Is “sampling effect” a problem for experiments investigating biodiversity-ecosystem function relationships? Oikos 87:403–407
Wardle DA, Zackrisson O (2005) Effects of species and functional group loss on island ecosystem properties. Nature 435:806–810
Wittebolle L, Marzorati M, Clement L et al (2009) Initial community evenness favours functionality under selective stress. Nature 458:623–626
Yachi S, Loreau M (1999) Biodiversity and ecosystem productivity in a fluctuating environment: the insurance hypothesis. Proc Natl Acad Sci USA 96:1463–1468
Zavaleta ES, Hulvey KB (2004) Realistic species losses disproportionately reduce grassland resistance to biological invaders. Science 306:1175–1177
Acknowledgments
We thank Michael J. Vanni, Luciana S. Carneiro, Marcus V. Vieira, Ricardo I. Rios and two anonymous referees for constructive comments that improved the final version of this manuscript. This work was supported by research productivity grants and scholarships provided by the Brazilian Council of Research (CNPq) and “Coordenadoria de Pessoal de Nivel Superior” (CAPES – Brazilian Ministry of Education), respectively. CAPES also provided open access to journals used in this bibliometric survey.
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Caliman, A., Pires, A.F., Esteves, F.A. et al. The prominence of and biases in biodiversity and ecosystem functioning research. Biodivers Conserv 19, 651–664 (2010). https://doi.org/10.1007/s10531-009-9725-0
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DOI: https://doi.org/10.1007/s10531-009-9725-0