Abstract
Cycas fairylakea is an endangered endemic species in China. Genetic diversity within and among four natural populations of this species in China was investigated using amplified fragments length polymorphism (AFLP). A moderate to low level of intraspecific genetic diversity was detected in this species (at population level: P = 39.57 %, H 0 = 0.244; at species level: P = 60.22%, H 0 = 0.356). The among-population component accounted for, respectively, 25.7 and 31.5% of the genetic variation, according to AMOVA and Shannon’s index, indicating most of the genetic variation was found between individuals within populations. All four populations have opposite pyramid age structure, and few coning individuals, which is still decreasing. Possibly because of habitat degradation and environmental pollution, plant diseases and insect pests in the populations were extremely serious, suggesting that the main factors threatening the survival of C. fairylakea populations were not genetic variation, but human activities and the breeding system of this species.
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References
P. Ajmone-Marsan C. Gorni A. Chitto R. Redaelli R. Wijk Particlevan P. Stam M. Motto (2001) ArticleTitleIdentification of QTLs for grain yield and grain-related traits of maize (Zea mays L.) using an AFLP map, different testers, and cofactor analysis Theor. Appl. Genet. 102 230–243 Occurrence Handle10.1007/s001220051640
M. Byrne S.H. James (1991) ArticleTitleGenetic diversity in the cycad Macrozamia riedlei Heredity 67 35–39
S. Coulibaly R.S. Pasquet R. Papa P. Gepts (2002) ArticleTitleAFLP analysis of the phenetic organization and genetic diversity of Vigna unguiculata L. Walp. Reveals extensive gene flow between wild and domesticated types Theor. Appl. Genet. 104 358–366 Occurrence Handle12582708 Occurrence Handle10.1007/s001220100740 Occurrence Handle1:CAS:528:DC%2BD38XislOgtrg%3D
J.J. Doyle J.L. Doyle (1990) ArticleTitleIsolation of plant DNA from fresh tissue Focus 12 13–15
N.C. Ellstrand R. Ornduff J.M. Clegg (1990) ArticleTitleGenetic structure of the Australian CycadMacrozamia communis (Zamiaceae) Am. J. Bot. 77 677–681 Occurrence Handle10.2307/2444814
L. Excoffier (1993) Analysis of Molecular Variance. Version 155 University of Geneva Genetics and Biometry Laboratory
Z.Z. Gao S.G. Jian Q. Wei Z.H. Xie S.P. Wang (2004) ArticleTitleWild cycads were harmed by Chilades pandava (Horsfield) Plant Quarantine 18 27–28
X.J. Ge Y. Yu N.X. Zhao H.S. Chen W.Q. Qi (2003) ArticleTitleGenetic variation in the endangered Inner Mongnolia endemic shrub Tetraena mongolica Maxim. (Zygophyllaceae) Biol. Conserv. 111 427–434 Occurrence Handle10.1016/S0006-3207(02)00312-9
Gonzalez-Astorga A.P. Vovides M.M. Ferrer C. Iglesias (2003) ArticleTitlePopulation genetics of Dioon edule Lindl. (Zamiaceae, Cycadales): biogeographical and evolutionary implications Biol. J. Linn. Soc. 80 IssueID3 457–467 Occurrence Handle10.1046/j.1095-8312.2003.00257.x
J.L. Hamrick M.J.W. Godt (1989) Allozyme diversity in plant species A.H.D. Brown M.T. Clegg A.L. Kahler B.S. Wier (Eds) Plant Population Genetics, Breeding, and Genetic Resources Sinauer Associates Sunderland, MA 43–63
J.L. Hamrick M.J.W. Godt (1996) Conservation genetics of endemic plant species J.C. Avise J.L. Hamrick (Eds) Conservation Genetics: Case Histories from Nature Chapman & Hall New York 281–304
Hilton-Taylor (2000) 2000 IUCN Red List of Threatened Species IUCN Gland, Switzerland and Cambridge, UK
Y.F. Hu Z.D. Chen C.J. Chen B.Y. Geng (1999) Discoveries of some fossils of cycad reprodutive organs from China and their significance to the origin of cycads Biology and Conservation of Cycads – Proceedings of the Fourth International Conference on Cycad Biology International Academic Publishers Beijing 135–141
S. Huang Y.C. Chiang B.A. Schaal C.H. Chou T.Y. Chiang (2001) ArticleTitleOrganelle DNA phylogeography of Cycas taitungensisa relict species in Taiwan Mol. Ecol. 10 2669–2681 Occurrence Handle11883881 Occurrence Handle10.1046/j.0962-1083.2001.01395.x Occurrence Handle1:CAS:528:DC%2BD3MXpt12lsL4%3D
C.J. Jones K.J. Edwards S. Castaglione M.O. Winfield F. Sala C. Wiel Particlevan de G. Bredemeijer B. Vosman M. Matthes A. Daly R. Brettschneider P. Ettini M. Buiatti E. Maestri A. Malcevschi N. Marmiroli R. Aert G. Volckaert J. Rueda R. Linacero A. Vazquez A. Karp (1997) ArticleTitleReproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories Mol. Breed. 3 381–390 Occurrence Handle10.1023/A:1009612517139 Occurrence Handle1:CAS:528:DyaK2sXntFensbg%3D
G. Keppel (2002) ArticleTitleLow genetic variation in a Pacific cycad: conservation concerns for Cycas seemannii (Cycadaceae) Oryx 36 IssueID1 41–49 Occurrence Handle10.1017/S0030605302000078
G. Keppel S.W. Lee P.D. Hodgskiss (2002) ArticleTitleEvidence for long isolation among populations of a Pacific Cycad: genetic diversity and differentiation in Cycas seemannii A. Br. (Cycadaceae) J. Heredity 93 IssueID2 133–139 Occurrence Handle10.1093/jhered/93.2.133 Occurrence Handle1:STN:280:DC%2BD38vgslKjtg%3D%3D
L.M. King B.A. Schaal (1989) ArticleTitleRibosomal DNA variation and distribution in Rudbeckia missouriensis Evolution 43 1117–1119 Occurrence Handle10.2307/2409592
J.A. Kwon C.W. Morden (2002) ArticleTitlePopulation genetic structure of two rare tree species (Colubrina oppositifolia and Alphitonia ponderosaRhamnaceae) from Hawaiian dry and mesic forests using random amplified polymorphic DNA markers Mol. Ecol. 11 991–1001 Occurrence Handle12030978 Occurrence Handle10.1046/j.1365-294X.2002.01497.x Occurrence Handle1:CAS:528:DC%2BD38Xls1arsrw%3D
D.R. Lacerda M.D.P. Acedo J.P. Lemos Filho M.B. Lovato (2001) ArticleTitleGenetic diversity and structure of natural populations of Plathymenia reticulata (Mimosoideae), a tropical tree from the Brazilian Cerrado Mol. Ecol. 10 1143–1152 Occurrence Handle11380873 Occurrence Handle10.1046/j.1365-294X.2001.01264.x Occurrence Handle1:CAS:528:DC%2BD3MXktFKitbs%3D
T.P. Lin Y.C. Sun H.C. Lo Y.P. Cheng (2000) ArticleTitleLow genetic diversity of Cycas taitungensis (Cycadaceae), an endemic species in Taiwan, revealed by allozyme analysis Taiwan J. Forest. Sci. 15 13–19
P. Lindblad J.L. Costa (2002) ArticleTitleThe cyanobacterial–cycad symbiosis Biol. Env: Proc. R. Irish Acad. 102B 31–33
R.C. Lewontin (1972) ArticleTitleThe apportionment of human diversity Evol. Biology 6 381–398
T.L. Maguire R. Peakall P. Saenger (2002) ArticleTitleComparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicenniaceae) detected by AFLPs and SSRs Theor. Appl. Genet. 104 388–398 Occurrence Handle12582711 Occurrence Handle10.1007/s001220100724 Occurrence Handle1:CAS:528:DC%2BD38XislOgtrc%3D
M.P. Miller (1998) AMOVA-PREP 1.01: A Program for the Preparation of the AMOVA Input Files from Dominant-Marker Raw Data Department of Biological Sciences Northern Arizona University, Flagstaff, AZ
U.G. Mueller L.L. Wolfenbarger (1999) ArticleTitleAFLP genotyping and fingerprinting Trends Ecol. Evol. 14 389–394 Occurrence Handle10481200 Occurrence Handle10.1016/S0169-5347(99)01659-6
K.J. Norstog T.J. Nicholls (1997) The Biology of the Cycads Cornell University Press Ithaca, NY
I.K. Sharma D.L. Jones P.I. Forster A.G. Young (1999) ArticleTitleLow isozyme differentiation among five species of the Macrozamia heteromera group (Zamiaceae) Biochem. Syst. Ecol. 27 67–77 Occurrence Handle10.1016/S0305-1978(98)00065-9 Occurrence Handle1:CAS:528:DyaK1MXitlCk
M.C. Sawkins B.L. Maass B.C. Pengelly H.J. Newbury B.V. Ford-Lloyd N. Maxted R. Smith (2001) ArticleTitleGeographical patterns of genetic variation in two species of Stylosanthes Sw. using Amplified Fragment Length Polymorphism (AFLP) Mol. Ecol. 10 1947–1958 Occurrence Handle11555239 Occurrence Handle10.1046/j.0962-1083.2001.01347.x Occurrence Handle1:CAS:528:DC%2BD3MXmvVSntL8%3D
M. Slatkin N.H. Barton (1989) ArticleTitleA comparison of three indirect methods for estimating average levels of gene flow Evolution 43 1349–1368 Occurrence Handle10.2307/2409452
P. Vos R. Hogers M. Bleeker M. Reijans T. Lee ParticleVan der M. Hornes A. Frijters J. Pot T. Wheeler J. Peleman M. Kuiper M. Zabeau (1995) ArticleTitleAFLP: a new technique for DNA fingerprinting Nucleic Acids Res. 23 4407–4414 Occurrence Handle7501463 Occurrence Handle1:CAS:528:DyaK2MXpslensbo%3D
T. Walters Decker-Walters (1991) ArticleTitlePatterns of allozyme diversity on the West Indies Cycad Zamia pumila (Zamiaceae) Am. J. Bot. 78 436–445 Occurrence Handle10.2307/2444966 Occurrence Handle1:CAS:528:DyaK3MXit1Grs7Y%3D
D.P. Wang F.W. Xing S.Y. Ji F.P. Chen (2003) ArticleTitleA. report on the wild Cycas fairylakea population Chin. Wild Plant Res. 22 IssueID2 19–20
D.Y. Wang (1996) Taxonomy of Cycas in China F.X. Wang H.B. Liang T.Q. Chen D.Y. Wang (Eds) Cycads in China Guangdong Science and Technology Press Guangzhou 13–19
F.X. Wang H.B. Liang T.Q. Chen D.Y. Wang (1996) Cycads in China Guangdong Science and Technology Press Guangzhou
S.L. Yang A.W. Meerow (1996) ArticleTitleThe Cycas pectinata complex: genetic structure and gene flow Int. J. Plant Sci. 157 468–483 Occurrence Handle10.1086/297364
Y.F. Yu (1999) ArticleTitleThe list of major national protected wild plant species in China (The first batch) Plants 5 3–11
Zabeau M. and Vos P. 1993. Selective restriction fragment amplification: a general method for DNA fingerprinting. European Patent Application 924026 29.7 (Publ. No. 0534858 A1).
G. Zhifeng B.A. Thomas (1989) ArticleTitleA review of fossil cycad megasporophylls, with new evidence of Crossozamia Pomel and its associated leaves from the lower Permian of Taiyuan, China Rev. Paleobot. Palynol. 60 205–223 Occurrence Handle10.1016/0034-6667(89)90044-4
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Jian, S., Zhong, Y., Liu, N. et al. Genetic Variation in the Endangered Endemic Species Cycas fairylakea (Cycadaceae) in China and Implications for Conservation. Biodivers Conserv 15, 1681–1694 (2006). https://doi.org/10.1007/s10531-004-5017-x
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DOI: https://doi.org/10.1007/s10531-004-5017-x