Skip to main content
Log in

An acid-stable bacterial laccase identified from the endophyte Pantoea ananatis Sd-1 genome exhibiting lignin degradation and dye decolorization abilities

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

Objectives

Isolation and identification of a novel laccase (namely Lac4) with various industrial applications potentials from an endophytical bacterium.

Results

Endophyte Sd-1 cultured in rice straw showed intra- and extra-cellular laccase activities. Genomic analysis of Sd-1 identified four putative laccases, Lac1 to Lac4. However, only Lac4 contains the complete signature sequence of laccase and shares at most 64 % sequence identity with other characterized bacterial multi-copper oxidases. Recombinant Lac4 can oxidize non-phenolic and phenolic compounds under acidic conditions and at 30–50 °C; Km values of Lac4 for ABTS at pH 2.5 and for guaiacol at pH 4.5 were 1 ± 0.15 and 6.1 ± 1.7 mM, respectively. The activity of Lac4 was stimulated by 0.8 mM Cu2+ and 5 mM Fe2+. In addition, Lac4 could decolorize various synthetic dyes and exhibit the degradation rate of 38 % for lignin.

Conclusions

The data suggest that Lac4 possesses promising biotechnological potentials.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Beloqui A, PitaM Polaina J, Martinez-Arias A, Golyshina OV, Zumarraga M, Yakimov MM, Garcia-Arellano H, Alcalde M, Fernandez VM, Elborough K, Andreu JM, Ballesteros A, Plou FJ, Timmis KN, Ferrer M, Golyshin PN (2006) Novel polyphenol oxidase mined from a metagenome expression library of bovine rumen: biochemical properties, structural analysis, and phylogenetic relationships. J Biol Chem 281:22933–22942

    Article  CAS  PubMed  Google Scholar 

  • Brijwani K, Rigdon A, Vadlani PV (2010) Fungal laccases: production, function, and applications in food processing. Enzyme Res 2010:149748

    Article  PubMed Central  PubMed  Google Scholar 

  • Enguita FJ, Martins LO, Henriques AO, Carrondo MA (2003) Crystal structure of a bacterial endospore coat component. A laccase with enhanced thermostability properties. J Biol Chem 278:19416–19425

    Article  CAS  PubMed  Google Scholar 

  • Fang ZM, Li TL, Wang Q, Zhang XC, Peng H, Fang W, Hong YZ, Ge HH, Xiao YZ (2011) A bacterial laccase from marine microbial metagenome exhibiting chloride tolerance and dye decolorization ability. Appl Microbiol Biotechnol 89:1103–1110

    Article  CAS  PubMed  Google Scholar 

  • Givaudan A, Effosse A, Faure D, Potier P, Bouillant ML, Bally R (1993) Polyphenol oxidase in Azospirillum lipoferum isolated from rice rhizosphere: evidence for laccase activity in nonmotile strains of Azospirillum lipoferum. FEMS Microbiol Lett 108:205–210

    Article  CAS  Google Scholar 

  • Kim C, Lorenz WW, Hoopes JT, Dean JF (2001) Oxidation of Phenolate Siderophores by the Multicopper Oxidase Encoded by the Escherichia coli yacK Gene. J Bacteriol 183:4866–4875

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Messerschmidt A, Huber R (1990) The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin. Eur J Biochem 187:341–352

    Article  CAS  PubMed  Google Scholar 

  • Murugesan K, Nam IH, Kim YM, Chang YS (2007) Decolorization of reactive dyes by a thermostable laccase produced by Ganoderma lucidum in solid state culture. Enzyme Microb Technol 40:1662–1672

    Article  CAS  Google Scholar 

  • Outten FW, Huffman DL, Hale JA, O’Halloran TV (2001) The independent cue and cus systems confer copper tolerance during aerobic and anaerobic growth in Escherichia coli. J Biol Chem 276:30670–30677

    Article  CAS  PubMed  Google Scholar 

  • Purahong W, Hyde KD (2011) Effects of fungal endophytes on grass and non-grass litter decomposition rates. Fungal Divers 47:1–7

    Article  Google Scholar 

  • Raj A, Reddy MMK, Chandra R (2007) Identification of low molecular weight aromatic compounds by gas chromatography–mass spectrometry (GC–MS) from kraft lignin degradation by three Bacillus sp. Int Biodeterior Biodegrad 59:292–296

    Article  CAS  Google Scholar 

  • Reyes P, Michael P, Vazquez-Duhalt R (1999) Hydroxybenzotria-zole increases the range of textile dyes decolorized by immobilized laccase. Biotechnol Lett 21:875–880

    Article  CAS  Google Scholar 

  • Santhanam N, Vivanco JM, Decker SR, Reardon KF (2011) Expression of industrially relevant laccases: prokaryotic style. Trends Biotechnol 29:480–489

    Article  CAS  PubMed  Google Scholar 

  • Sharma P, Goel R, Capalash N (2006) Bacterial laccases. World J Microbiol Biotechnol 23:823–832

    Article  Google Scholar 

  • Singh AD, Kumar SR (2010) Ligninolytic fungal laccases and their biotechnological applications. Appl Biochem Biotechnol 160:1760–1788

    Article  Google Scholar 

  • Telke AA, Ghodake GS, Kalyani DC, Dhanve RS, Govindwar SP (2010) Biochemical characteristics of a textile dye degrading extracellular laccase from a Bacillus sp. ADR Bioresour Technol 102:5

    Google Scholar 

  • Xiong XQ, Liao HD, Ma JS, Liu XM, Zhang LY, Shi XW, Yang XL, Lu XN, Zhu YH (2014) Isolation of a rice endophytic bacterium, Pantoea sp. Sd-1, with ligninolytic activity and characterization of its rice straw degradation ability. Lett Appl Microbiol 58:123–129

    Article  CAS  PubMed  Google Scholar 

  • Yang Y, Wei FX, Zhuo R, Fan FF, Liu HH, Zhang C, Ma L, Jiang ML, Zhang XY (2013) Enhancing the Laccase Production and Laccase Gene Expression in the White-Rot Fungus Trametes velutina 5930 with Great Potential for Biotechnological Applications by Different Metal Ions and Aromatic Compounds. PLoS ONE 8(11):e79307

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Zheng MM, Chi YJ, Yi HW, Shao SL (2014) Decolorization of Alizarin Red and other synthetic dyes by a recombinant laccase from Pichia pastoris. Biotechnol Lett 36:39–45

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This research was supported by the National Natural Science Foundation of China (51378191), The Specialized Research Fund for the Doctoral Program of Higher Education (20110161120020).

Supporting information

Supplementary Table 1—Low molecular weight compounds from both non-treated and treated lignin by recombinant Lac4 for 8 hours incubation identified by GC-MS.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yonghua Zhu.

Electronic supplementary material

Below are the links to the electronic supplementary materials.

Supplementary material 1 (PDF 26 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Shi, X., Liu, Q., Ma, J. et al. An acid-stable bacterial laccase identified from the endophyte Pantoea ananatis Sd-1 genome exhibiting lignin degradation and dye decolorization abilities. Biotechnol Lett 37, 2279–2288 (2015). https://doi.org/10.1007/s10529-015-1914-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-015-1914-1

Keywords

Navigation