Skip to main content
Log in

Characterization of ribose-5-phosphate isomerase of Clostridium thermocellum producing d-allose from d-psicose

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

The rpiB gene, encoding ribose-5-phosphate isomerase (RpiB) from Clostridium thermocellum, was cloned and expressed in Escherichia coli. RpiB converted d-psicose into d-allose but it did not convert d-xylose, l-rhamnose, d-altrose or d-galactose. The production of d-allose by RpiB was maximal at pH 7.5 and 65°C for 30 min. The half-lives of the enzyme at 50°C and 65°C were 96 h and 4.7 h, respectively. Under stable conditions of pH 7.5 and 50°C, 165 g d-allose l1 was produced without by-products from 500 g d-psicose l−1 after 6 h.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Bhuiyan HS, Itami Y, Izumori K (1997) Isolation of an l-rhamnose isomerase-constitutive mutant of Pseudomonas sp. strain LL172: purification and characterization of the enzyme. J Ferment Bioeng 84:319–323

    Article  CAS  Google Scholar 

  • Bhuiyan HS, Itami Y, Rokui Y, Katayama T, Izumori K (1998) d-Allose production from d-psicose using immobilized l-rhamnose isomerase. J Ferment Bioeng 85:539–541

    Article  CAS  Google Scholar 

  • Dische Z, Borenfreund E (1951) A new spectrophotometric method for the detection and determination of keto sugars and trioses. J Biol Chem 192:583–587

    PubMed  CAS  Google Scholar 

  • Hossain MA, Wakabayashi H, Goda F, Kobayashi S, Maeba T, Maeta H (2000) Effect of the immunosuppressants FK 506 and d-allose on allogenic orthotopic liver transplantation in rats. Transplant Proc 32:2021–2023

    Article  PubMed  CAS  Google Scholar 

  • Hossain MA, Izuishi K, Maeta H (2003) Protective effects of d-allose against ischemia reperfusion injury of the rat river. J Hepatobiliary Pancreat Surg 10:218–225

    Article  PubMed  Google Scholar 

  • Hossain MA, Izuishi K, Tokuda M, Izumori K, Maeta H (2004) d-Allose has a strong suppressive effect against ischemia/reperfusion injury: a comparative study with allopurinol and superoxide dismutase. J Hepatobiliary Pancreat Surg 11:181–189

    Article  PubMed  Google Scholar 

  • Hossain MA, Wakabayashi H, Izuishi K, Okano K, Yachida S, Tokuda M, Izumori K, Maeta H (2006) Improved microcirculatory effect of d-allose on hepatic ischemia reperfusion following partial hepatectomy in cirrhotic rat liver. J Biosci Bioeng 101:369–371

    Article  PubMed  CAS  Google Scholar 

  • Kim C, Song S, Park C (1997) The d-allose operon of Escherichia coli K-12. J Bacteriol 179:7631–7637

    PubMed  CAS  Google Scholar 

  • Leang K, Takada G, Ishimura A, Okita M, Izumori K (2004) Cloning, nucleotide sequence, and overexpression of the l-rhamnose isomerase gene from Pseudomonas stutzeri in Escherichia coli. Appl Environ Microbiol 70:3298–3304

    Article  PubMed  CAS  Google Scholar 

  • Leang K, Takada G, Fukai Y, Morimoto K, Granström TB, Izumori K (2004) Novel reactions of l-rhamnose isomerase from Pseudomonas stutzeri and its relation with d-xylose isomerase via substrate specificity. Biochim Biophys Acta 1674:68–77

    PubMed  CAS  Google Scholar 

  • Menavuvu BT, Poonperm W, Leang K, Noguchi N, Okada H, Morimoto K, Granström TB, Takada G, Izumori K (2006) Efficient biosynthesis of d-allose from d-psicose by cross-linked recombinant l-rhamnose isomerase: separation of product by ethanol crystallization. J Biosci Bioeng 101:340–345

    Article  PubMed  CAS  Google Scholar 

  • Morimoto K, Park CS, Ozaki M, Takeshita K, Shimonishi T, Granström TB, Takata G., Tokuda M, Izumori K (2006) Large scale production of d-allose from d-psicose using continuous bioreactor and separation system. Enzyme Microb Technol 38:855–859

    Article  CAS  Google Scholar 

  • Poulsen TS, Chang YY, Hove-Jensen B (1999) d-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose. J Bacteriol 181:7126–7130

    PubMed  CAS  Google Scholar 

  • Teplyakov A, Obmolova G, Badet-Denisot MA, Badet B (1999) The mechanism of sugar phosphate isomerization by glucosamine 6-phosphate synthase. Protein Sci 8:596–602

    Article  PubMed  CAS  Google Scholar 

  • Zhang RG, Andersson CE, Sakarina T, Evdokimova E, Edwards AM, Joachimiak A, Savchenko A, Mowbray SL (2003) The 2.2 Å resolution structure of RpiB/AlsB from Escherichia coli illustrates a new approach to the ribose-5-phosphate isomerase reaction. J Mol Biol 332:1083–1094

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This study was supported by the Second Phase of Brain Korea 21 Project (Ministry of Education & Human Resources Development) and by Grant R01-2004-000-10012-0 from the Basic Research Program of the Korea Science & Engineering Foundation (KOSEF).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Deok-Kun Oh.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Park, CS., Yeom, SJ., Kim, HJ. et al. Characterization of ribose-5-phosphate isomerase of Clostridium thermocellum producing d-allose from d-psicose. Biotechnol Lett 29, 1387–1391 (2007). https://doi.org/10.1007/s10529-007-9393-7

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-007-9393-7

Keywords

Navigation