Skip to main content
Log in

Purification and characterization of a fibrinolytic enzyme of Bacillus subtilis DC33, isolated from Chinese traditional Douchi

  • Original Paper
  • Published:
Journal of Industrial Microbiology and Biotechnology

Abstract

Bacillus subtilis DC33 producing a novel fibrinolytic enzyme was isolated from Ba-bao Douchi, a traditional soybean-fermented food in China. The strong fibrin-specific enzyme subtilisin FS33 was purified to electrophoretic homogeneity using the combination of various chromatographic steps. The optimum temperature, pH value, and pI of subtilisin FS33 were 55°C, 8.0, and 8.7, respectively. The molecular weight was 30 kDa measured by SDS–PAGE under both reducing and non-reducing conditions. The enzyme showed a level of fibrinolytic activity that was about six times higher than that of subtilisin Carlsberg. The first 15 amino acid residues of N-terminal sequence of the enzyme were A-Q-S-V-P-Y-G-I-P-Q-I-K-A-P-A, which are different from that of other known fibrinolytic enzymes. The amidolytic activities of subtilisin FS33 were inhibited completely by 5 mM phenylmethanesulfonyl fluoride (PMSF) and 1 mM soybean trypsin inhibitor (SBTI), but 1,4-dithiothreitol (DTT), β-mercaptoethanol, and p-hydroxymercuribenzoate (PHMB) did not affect the enzyme activity; serine and tryptophan are thus essential in the active site of the enzyme. The highest affinity of subtilisin FS33 was towards N-Succ-Ala-Ala-Pro-Phe-pNA. Therefore, the enzyme was considered to be a subtilisin-like serine protease. The fibrinolytic enzyme had a high degrading activity for the Bβ-chains and Aα-chain of fibrin(ogen), and also acted on thrombotic and fibrinolytic factors of blood, such as plasminogen, urokinase, thrombin, and kallikrein. So subtilisin FS33 was able to degrade fibrin clots in two ways, i.e., (a) by forming active plasmin from plasminogen and (b) by direct fibrinolysis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  1. Mine Y, Wong AHK, Jiang B (2005) Fibrinolytic enzymes in Asian traditional fermented foods. Food Rev In 38:243–250

    Article  CAS  Google Scholar 

  2. Moukhametova LI, Aisina RB, Lomakina GY, Varfolomeev SD (2002) Properties of the urokinase-type plasminogen activator modified with phenylglyoxal. Russ J Bioorg Chem 28(4):278–283

    Article  CAS  Google Scholar 

  3. Bode C, Runge M, Smalling RW (1996) The future of thrombolysis in the treatment of acute myocardial infarction. Eur Heart J 17:55–60

    PubMed  Google Scholar 

  4. Fujita M, Hong K, Ito Y, Fujii R, Kariya K, Nishimuro S (1995) Thrombolytic effect of nattokinase on a chemically induced thrombosis model in rat. Biol Pharm Bull 18:1387–1391

    PubMed  CAS  Google Scholar 

  5. Kim W, Choi K, Kim Y (1996) Purification and characterization of a fibrinolytic enzyme produced from Bacillus sp. strain CK11-4 screened from Chungkook-Jang. Appl Environ Microbiol 62:2482–2488

    PubMed  CAS  Google Scholar 

  6. Zheng ZL, Zuo ZY, Liu ZG (2005) Construction of a 3D model of nattokinase, a novel fibrinolytic enzyme from Bacillus natto: a novel nucleophilic catalytic mechanism for nattokinase. J Mol Graph 23:373–380

    Article  CAS  Google Scholar 

  7. Wang F, Wang C, Li M (2005) Crystal structure of earthworm fibrinolytic enzyme component B: a novel, glycosylated two-chained trypsin. J Mol Biol 348:671–685

    Article  PubMed  CAS  Google Scholar 

  8. Jia YH, Jin Y, Lu QM, Li DS (2003) Jerdonase, a novel serine protease with kinin-releasing and fibrinogenolytic activity from Trimeresurus jerdonii venom. Acta Biochem S 35(8):689–694

    CAS  Google Scholar 

  9. De-Simone SG, Correa-Netto C, Antunes OAC (2005) Biochemical and molecular modeling analysis of the ability of two p-aminobenzamidine-based sorbents to selectively purify serine proteases (fibrinogenases) from snake venoms. J Chromatogr B Analyt Technol Biomed Life Sci 822:1–9

    Article  PubMed  CAS  Google Scholar 

  10. You WK, Sohn YD, Kim KY, Park DH (2004) Purification and molecular cloning of a novel serine protease from the centipede, Scolopendra subspinipes mutilans. Insect Biochem Mol Biol 34:239–250

    Article  PubMed  CAS  Google Scholar 

  11. Ahn MY, Hahn BS, Ryu KS (2003) Purification and characterization of a serine protease with fibrinolytic activity from the dung beetles, Catharsius molossus. Thromb Res 112:339–347

    Article  PubMed  CAS  Google Scholar 

  12. Chudzinski-Tavassi AM, Kelen EM, De Paula Rosa AP (1998) Fibrino(geno)lytic properties of purified hementerin, a metalloprotease from the leech Haementeria depressa. Thromb Haemost 80:155–160

    PubMed  CAS  Google Scholar 

  13. Sumi H, Hamada H, Tsushima H (1987) A novel fibrinolytic enzyme (nattokinase) in the vegetable cheese Natto, a typical and popular soybean food in the Japanese diet. Experientia 43:1110–1111

    Article  PubMed  CAS  Google Scholar 

  14. Sumi H, Hamada H, Nakanishi K, Hiratani H (1990) Enhancement of the fibrinolytic activity in plasma by oral administration of nattokinase. Acta Haematol 84:139–143

    Article  PubMed  CAS  Google Scholar 

  15. Sumi H, Yanagisawa Y, Yatagai C (2004) Natto bacillus as oral fobrinolytic agent: Nattokinase activity and the ingestion effect of Bacillus natto. Food Sci Tec 10(1):17–20

    Article  Google Scholar 

  16. Fujita M, Hong K, Ito Y (1995) Transport of NK across of the rat intestinal tract. Biol Pharm Bull 18(9):1194–1196

    PubMed  CAS  Google Scholar 

  17. Wang CT, Ji BP, Li B, Ji H (2003) Isolation of Douchi fibrinolytic enzyme producing strain DC33 from Chinese Douchi and primary analysis of the enzyme property. Food Sci (China) 6:34–38

    Google Scholar 

  18. Krieg Nr, Holt JG (1984) Bergey’s manual of systematic bacteriology, Williams and Wilkins, Baltimore 1:1104–1139

  19. Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–254

    Article  PubMed  CAS  Google Scholar 

  20. Astrup T, MuEllertz S (1952) The fibrin plate method for estimating fibrinolytic activity. Arch Biochem Biophys 40:346–351

    Article  PubMed  CAS  Google Scholar 

  21. Price Nc, Stevens L (1989) Fundamentals of enzimology 2nd edn. Oxford university press, Oxford

    Google Scholar 

  22. Peng Y, Huang Q, Zhang RH, Zhang YZ (2003) Purification and characterization of a fibrinolytic enzyme produced by Bacillus amyloliquefaciens DC-4. Comp Biochem Physiol B Biochem Mol Biol 134:45–52

    Article  PubMed  Google Scholar 

  23. Glazer AN (1967) Esteratic reactions catalyzed by subtilisins. J Biol Chem 242(3):433–436

    PubMed  CAS  Google Scholar 

  24. Laemmli UK (1970) Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature 227:680–685

    Article  PubMed  CAS  Google Scholar 

  25. Kim HK, Kim GT, Kim DK, Choi WA (1997) Purification and characterization of a novel fibrinolytic enzyme from Bacillus sp. KA38 originated from fermented fish. J Ferment Bioen 84:307–312

    Article  CAS  Google Scholar 

  26. Wong SL, Price CW, Goldfarb DS, Doi RH (1984) The subtilisin E gene of Bacillus subtilis is transcribed from a sigma-37 promoter in vivo. Proc Natl Acad Sci USA 81:1184–1188

    Article  PubMed  CAS  Google Scholar 

  27. Peng Y, Yang XJ, Zhang YZ (2005) Microbial fibrinolytic enzymes: an overview of source, production, properties and thrombolytic activity in vivo. Appl Microbiol Biotechnol 0175–7598, 1432–0614 (Online). DOI: 10.1007/s00253-005-0159-7

  28. Matsuo O, Rijken DC, Collen D (1981) Thrombolysis by human tissue plasminogen activator and urokinase in rabbits with experimental pulmonary embolus. Nature 291(5816):590–591

    Article  PubMed  CAS  Google Scholar 

  29. Wiman B, Wallen P (1975) On the primary structure of human plasminogen and plasmin. Purification and characterization of cyanogen-bromide fragments. Eur J Biochem 57:387–394

    Article  PubMed  CAS  Google Scholar 

  30. Lijnen HR, Cock FD, Hoef BV, Schlott B, Collen D (1994) Characterization of the interaction between plasminogen and staphylokinase. Eur J Biochem 224:143–149

    Article  PubMed  CAS  Google Scholar 

  31. Fujita M, Nomura K, Hong K, Ito Y, Asada A (1993) Purification and characterization of a strong fibrinolytic enzyme (nattokinase) in the vegetable cheese natto, a popular soybean fermented food in Japan. Biochem Biophys Res Commun 197:1340–1347

    Article  PubMed  CAS  Google Scholar 

  32. Takahashi M, Sekine T, Kuba N, Nakamori S, Yasuda M (2004) The production of recombinant APRP, an alkaline protease derived from Bacillus pumilus TYO-67, by in vitro refolding of pro-enzyme fixed on a solid surface. J Biochem 136(4):549–556

    Article  PubMed  CAS  Google Scholar 

  33. Chang CT, Fan MH, Kuo FC, Sung HY (2000) Potent fibrinolytic enzyme from a mutant of Bacillus subtilis IMR-NK1. J Agric Food Chem 48:3210–3216

    Article  PubMed  CAS  Google Scholar 

  34. Seo JH, Lee SP (2004) Production of fibrinolytic enzyme(KK) from soybean grits fermented by Bacillus firmus NA-1. J Med Food 7(4):442–449

    Article  PubMed  CAS  Google Scholar 

  35. Kim JH, Kim YS (1999) A fibrinolytic metalloprotease from the fruiting bodies of an edible mushroom, Armillariella mellea. Biosci Biotechnol Biochem 63:2130–2136

    Article  PubMed  CAS  Google Scholar 

  36. Smith EL, Delange RJ, Evans WH, Landon M (1968) Subtilisin Carlsberg V. The complete sequence, comparison with subtilisin BPN’, evolutionary relationships. J Biol Chem 243:2184–2191

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Bao Ping Ji.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wang, C.T., Ji, B.P., Li, B. et al. Purification and characterization of a fibrinolytic enzyme of Bacillus subtilis DC33, isolated from Chinese traditional Douchi . J IND MICROBIOL BIOTECHNOL 33, 750–758 (2006). https://doi.org/10.1007/s10295-006-0111-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10295-006-0111-6

Keywords

Navigation