Computational Analysis of Cysteine Substitutions Modelled on the α- and β-domains of Cd₅,Zn₂-Metallothionein 2

Abstract

Several mutant forms of rat liver Cd₅,Zn₂-metallothionein 2 (Cd₅,Zn₂-MT 2) [1] have been computationally modelled and analysed. All terminal cysteines (5, 13, 19, 21, 26, 29, 33, 36, 41, 48, 57 and 59, Figure 1) have been independently substituted by three other co-ordinating amino-acids (aspartate, glutamate and histidine), and the side-chains of the mutated residues have been modelled to co-ordinate the seven metal ions while minimizing the conformational variations with respect to the wild type protein. We have compared the ability of the putative mutant forms to maintain the MT binding properties. Substitution by aspartate residue best preserves the 3D MT structure. In addition, the mutations C5H plus C21H/E/D show neighbouring impairments that prevent their simultaneous substitution. Although replacement of cysteine by aspartate is feasible in all cases, to our knowledge there is no example of aspartate and cysteine residues co-ordinating to the same zinc atom. Accordingly, the use of histidine or glutamate instead of aspartate cannot be ruled out. The mutant forms in the β-domain of Cd₅,Zn₂-MT 2 have yielded more neighbouring contacts than those in the α-domain, which is corroborated by the accessible surface areas [2] of the sulfur atoms [3] in the native form.