Abstract
Calix[n]arenes (abbreviated as CX[n]) are the macro-molecules based on phenol groups with a hydrophobic cavity to encapsulate a gas or small molecules. They are used as molecular vehicles. For instance, these molecules are used in the activation of the solubility of monomers in the specific media and in pharmaceutical drug delivery. The limit of the development of gaseous pollutants will be a vital subject in the future. The polluting gases NO3, NO2, CO2, N2, etc., need cage molecules, such as CX[4], to be encapsulated. In this report, the red shift of the H-bonding interactions of the CX[4]-gas (by adding the gas inside or outside the cavity) is clearly explained by the vibrational analysis. The electronic spectra of the complexes of CX[4] with NO3, NO2, CO2, and N2) exhibit a blue-shift pick in comparison with the ones observed for the CX[4] molecule. The electrophilic and nucleophilic sites of the stable host-guest have been investigated. Additionally, the non-covalent interactions have been calculated based on the reduced density gradient RDG and QTAIM theory.
Similar content being viewed by others
References
Athar M, Lone MY, Jha PC (2018) Recognition of anions using urea and thiourea substituted calixarenes: a density functional theory study of non-covalent interactions. Chem Phys 501:68–77. https://doi.org/10.1016/j.chemphys.2017.12.002
Kumagai S, Hayashi K, Kameda T et al (2018) Identification of number and type of cations in water-soluble Cs+ and Na+ calix[4]arene-bis-crown-6 complexes by using ESI-TOF-MS. Chemosphere 197:181–184. https://doi.org/10.1016/j.chemosphere.2018.01.040
Arena G, Contino A, Gulino FG et al (2000) Complexation of small neutral organic molecules by water soluble calix[4]arenes. Tetrahedron Lett 41:9327–9330. https://doi.org/10.1016/S0040-4039(00)01687-7
Ortolan A, Oestroem I, Caramori G et al (2018) Anion recognition by organometallic calixarenes: analysis from relativistic DFT calculations. Organometallics 37. https://doi.org/10.1021/acs.organomet.8b00292
Erdemir S, Malkondu S, Kocyigit O (2019) A reversible calix[4]arene armed phenolphthalein based fluorescent probe for the detection of Zn2+ and an application in living cells. Luminescence 34:106–112. https://doi.org/10.1002/bio.3585
Haino T, Rudkevich DM, Shivanyuk A et al (2000) Induced-fit molecular recognition with water-soluble cavitands. Chem Eur J 6:3797–3805. https://doi.org/10.1002/1521-3765(20001016)6:20<3797::AID-CHEM3797>3.0.CO;2-1
Suwattanamala A, Magalhães AL, Gomes JANF (2007) Theoretical study on the structure and conformational features of distally dibromo-dipropoxythiacalix[4]arene derivatives and their Zn2+ complexes. Theor Chem Accounts 117:431–440. https://doi.org/10.1007/s00214-006-0173-6
Gassoumi B, Chaabene M, Ghalla H, Chaabane RB (2019) Physicochemical properties of the three-cavity form of calix[n = 4, 6, 8]aren molecules: DFT investigation. Theor Chem Accounts 138:58. https://doi.org/10.1007/s00214-019-2425-2
Atwood JL, Koutsantonis GA, Raston CL (1994) Purification of C60 and C70 by selective complexation with calixarenes. Nature 368:229–231. https://doi.org/10.1038/368229a0
Da Silva E, Lazar AN, Coleman AW (2004) Biopharmaceutical applications of calixarenes. J Drug Deliv Sci Technol 14:3–20. https://doi.org/10.1016/S1773-2247(04)50001-1
Fahmy SA, Ponte F, Abd El-Rahman MK et al (2018) Investigation of the host-guest complexation between 4-sulfocalix[4]arene and nedaplatin for potential use in drug delivery. Spectrochim Acta A Mol Biomol Spectrosc 193:528–536. https://doi.org/10.1016/j.saa.2017.12.070
Schühle DT, Peters JA, Schatz J (2011) Metal binding calixarenes with potential biomimetic and biomedical applications. Coord Chem Rev 255:2727–2745. https://doi.org/10.1016/j.ccr.2011.04.005
Balasaheb Nimse S, Kim T (2013) Biological applications of functionalized calixarenes. Chem Soc Rev 42:366–386. https://doi.org/10.1039/C2CS35233H
Hua B, Shao L, Zhang Z et al (2018) Pillar[6]arene/acridine orange host–guest complexes as colorimetric and fluorescence sensors for choline compounds and further application in monitoring enzymatic reactions. Sensors Actuators B Chem 255:1430–1435. https://doi.org/10.1016/j.snb.2017.08.141
Kaneko S, Inokuchi Y, Ebata T et al (2011) Laser spectroscopic and theoretical studies of encapsulation complexes of calix[4]arene. J Phys Chem A 115:10846–10853. https://doi.org/10.1021/jp204577j
Cabral BJC, Coutinho K, Canuto S (2014) Dynamics of endo- vs. exo-complexation and electronic absorption of calix[4]arene-Ar2. Chemical Physics Letters 612:266–272. https://doi.org/10.1016/j.cplett.2014.08.036
Gassoumi B, Ghalla H, Chaabane RBen (2019) DFT and TD-DFT investigation of calix[4]arene interactions with TFSI− ion. Heliyon 5:e02822. https://doi.org/10.1016/j.heliyon.2019.e02822
Athar M, Das S, Jha PC, Jha AM (2018) Conformational equilibrium study of calix[4]tetrolarenes using density functional theory (DFT) and molecular dynamics simulations. Supramol Chem 30:982–993. https://doi.org/10.1080/10610278.2018.1517876
Zare K, Shadmani N, Pournamdari E (2013) DFT/NBO study of nanotube and calixarene with anti-cancer drug. J Nanostruct Chem 3:75. https://doi.org/10.1186/2193-8865-3-75
Masoumi S, Nadimi E, Hossein-Babaei F (2018) Electronic properties of Ag-doped ZnO: DFT hybrid functional study. Phys Chem Chem Phys 20:14688–14693. https://doi.org/10.1039/C8CP01578C
Mazzone G, Alberto ME, Ponte F et al (2018) Anion-π weak interactions in a heteroaromatic calixarene receptor. A theoretical investigation. Inorg Chim Acta 470:379–384. https://doi.org/10.1016/j.ica.2017.05.033
Evans JD, Hollis CA, Hack S et al (2012) Anion−π interactions of hexaaryl[3]radialenes. J Phys Chem A 116:8001–8007. https://doi.org/10.1021/jp301464s
Dennington RI, Keith T, Millam J, GaussView Version 5.0.8. Semichem Inc
Boys SF, Bernardi F (1970) The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors. Mol Phys 19:553–566. https://doi.org/10.1080/00268977000101561
Allouche A-R (2011) Gabedit—a graphical user interface for computational chemistry softwares. J Comput Chem 32:174–182. https://doi.org/10.1002/jcc.21600
Biegler-Konig JSF, Bayles D (2001) Software news and updates AIM 2000. J Comput Chem 22
Johnson ER, Keinan S, Mori-Sánchez P et al (2010) Revealing noncovalent interactions. J Am Chem Soc 132:6498–6506. https://doi.org/10.1021/ja100936w
Furer VL, Potapova LI, Kovalenko VI (2017) DFT study of hydrogen bonding and IR spectra of calix[6]arene. J Mol Struct 1128:439–447. https://doi.org/10.1016/j.molstruc.2016.09.010
Mchedlov-Petrossyan NO, Vilkova LN, Vodolazkaya NA et al (2006) The nature of aqueous solutions of a cationic calix[4]arene: a comparative study of dye–calixarene and dye–surfactant interactions. Sensors 6:962–977. https://doi.org/10.3390/s6080962
Furer VL, Vandyukov AE, Zaripov SR et al (2018) FT-IR and FT-Raman study of hydrogen bonding in p-alkylcalix[8]arenes. Vib Spectrosc 95:38–43. https://doi.org/10.1016/j.vibspec.2018.01.006
Israr M, Faheem F, Minhas FT, Rau A, Rauf S, Sha MR, Rahim F, Shah K, Bhanger MI (2016) Extraction properties of calix[4]arenes towards sulphonated dyes. Am J Anal Chem 07. https://doi.org/10.4236/ajac.2016.72019
Bhatt M, Maity D, Hingu V et al (2017) Functionalized calix[4]arene as a colorimetric dual sensor for Cu(II) and cysteine in aqueous media: experimental and computational study. New J Chem 41:12541–12553. https://doi.org/10.1039/C7NJ02537H
Acknowledgments
In this work, we were granted access to the HPC resources of the FLMSN, “Fédération Lyonnaise de Modélisation et Sciences Numériques,” partner of EQUIPEX EQUIP@MESO and to the “Centre de calcul CC-IN2P3” at Villeurbanne, France.
Funding
The authors were financially supported by the Tunisian Ministry of High Education and Scientific Research.
Author information
Authors and Affiliations
Corresponding authors
Additional information
Publisher’s note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Electronic supplementary material
ESM 1
(DOCX 646 kb)
Rights and permissions
About this article
Cite this article
Gassoumi, B., Ghalla, H. & Chaabane, R.B. Host-guest complexation studies of NO3, NO2, CO2, and N2 gas with the calix[4]arene molecule. J Mol Model 26, 149 (2020). https://doi.org/10.1007/s00894-020-04416-2
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s00894-020-04416-2