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Optimization of solid-phase synthesis of difficult peptide sequences via comparison between different improved approaches

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Summary.

Different approaches are applied to avoid the strong aggregation of the difficult peptide sequences, which is considered as the main reason for incomplete acylation and deprotection reactions hindering the synthesis of these sequences.

Temporary protection of amide nitrogen of peptide bond using 2-hydroxy-4-methoxybenzyl (Hmb) and 2,4,6-timethoxybenzyl (Tmob) amino acid derivatives, introduction of D-Ala or Pro residues in the peptide chain sequences and utilization of microwave energy are proved to be useful methods in the enhancement of solubility and in the hindrance of the aggregation during the solid-phase synthesis of oligoalanine. Oligoalanine is chosen to demonstrate the difficult sequences and to compare the efficiencies of these methods.

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Abbreviations

DCM:

Dichloromethane

DIC:

N,N-diisopropylcarbodiimide

DMAP:

4-dimethylaminopyridine

DMF:

dimethylformamide

Fmoc:

9-fluorenylmethoxycarbonyl

Hmb:

2-hydroxy-4-methoxybenzyl

HOBt:

1-hydroxybenzo-triazole

Ps–PEG:

polystyrene–polyethyleneglycol

TFA:

trifluoroacetic acid

Tmob:

2,4,6-timethoxybenzyl

References

  • Abdel Rahman S, Goldammer C, Bayer E (1992) A novel solvent system for the synthesis of long chain oligohomopeptides. Peptides: 300–301

  • N Clausen C Goldammer K Jaunch E Bayer (1996) Synthesis of difficult sequences using N-Tmob-protected amino acid derivatives PT Kaumaya RS Hodeges (Eds) Peptides: chemistry, structure and biology Mayflower Scientific Ltd. Birmingham 71–72

    Google Scholar 

  • H Edelhoch R Berlman M Wilcheck (1969) ArticleTitleFluorescence studies with tyrosyl peptides Biochemistry 7 3893–3900 Occurrence Handle10.1021/bi00851a016

    Article  Google Scholar 

  • M Erdélyi A Gogoll (2002) ArticleTitleRapid microwave-assisted solid phase peptides synthesis Synthesis 11 1592–1596

    Google Scholar 

  • T Haack M Mutter (1992) ArticleTitleSerine derived oxazolidines as secondary structure disrupting, solubilizing building blocks in peptide synthesis Tetrahedron Lett 33 1589–1592 Occurrence Handle10.1016/S0040-4039(00)91681-2 Occurrence Handle1:CAS:528:DyaK38XitlKit78%3D

    Article  CAS  Google Scholar 

  • BL Hayes (2002) Microwave synthesis, chemistry of the speed of light CEM Publishing Matthews, NC

    Google Scholar 

  • T Johnson M Quibell D Owen RC Sheppard (1993) ArticleTitleA reversible protecting group for the amide bond in peptides. Use in the synthesis of difficult sequences J Chem Soc Chem Commun 11 369–372 Occurrence Handle10.1039/c39930000369

    Article  Google Scholar 

  • E Kaiser RL Colescott CD Bossinger PI Cook (1970) ArticleTitleColor test for the detection of free terminal amino groups in the solid phase synthesis of peptides Anal Biochem 34 595–598 Occurrence Handle5443684 Occurrence Handle10.1016/0003-2697(70)90146-6 Occurrence Handle1:CAS:528:DyaE3cXhtVWjur0%3D

    Article  PubMed  CAS  Google Scholar 

  • SB Kent (1992) NoChapterTitle R Epton (Eds) Innovations and perspectives is solid phase synthesis Intercept Ltd. Andover 1

    Google Scholar 

  • Kent SBH (1985) In: Deber CM, Hruby VJ, Kopple KD (eds) Peptides, structure and function. Proceeding of the 9th American Peptide Symposium. Pierce Chemical Co., Rockford, II, USA, pp 407–414

  • Lloyd DH, Petrie GM, Noble RL, Tam JP (1990) In: Rivier LE, Marshall GR (eds) Peptides: Proceeding of the 11th American Peptide Symposium. Escom, Leiden, Netherlands, pp 909–910

  • A Loupy (2002) Microwaves in organic synthesis Wiley-VCH Weinheim

    Google Scholar 

  • J Meinhofer M Waki EP Heimer TJ Lambors R Makofske (1979) ArticleTitleSolid phase synthesis without repetitive acidolysis Int J Pept Prot Res 13 35–39 Occurrence Handle10.1111/j.1399-3011.1979.tb01847.x

    Article  Google Scholar 

  • SCF Milton RC Milton (1990) ArticleTitleAn improved solid-phase synthesis of a difficult sequence peptide using hexafluoro-2-propanol Int J Pept Prot Res 36 193–196 Occurrence Handle1:CAS:528:DyaK3MXnt1ai Occurrence Handle10.1111/j.1399-3011.1990.tb00966.x

    Article  CAS  Google Scholar 

  • M Mutter H Oppliger A Zier (1992) ArticleTitleSolubilizing protecting group in peptide synthesis. Effect of side-chain-attached polyethylene glycol derivatives upon β-sheet formation of model peptides Macromol Chem Rapid Commun 13 151–157 Occurrence Handle10.1002/marc.1992.030130303 Occurrence Handle1:CAS:528:DyaK38XitlKit7o%3D

    Article  CAS  Google Scholar 

  • Mutter M, Pillai VNR, Anzinger H, Bayer E, Toniolo C (1981) In: Brunfeldt K (ed) Peptides: Proceedings of the 16th European Peptide Symposium. Scriptor, Copenhagen, pp 660–665

  • Quibell M, Johnson T (1994) In: Maia HSL (ed) Proceedings of the 23rd European Peptide Symposium. Escom Science Publishers BV, Leiden, Netherlands, 1995, pp 173–174

  • RC Sheppard BJ Williams (1982) ArticleTitleA new base labile anchoring group for solid phase peptide synthesis Int J Pept Prot Res 20 451–454 Occurrence Handle1:CAS:528:DyaL3sXht1Klsrw%3D Occurrence Handle10.1111/j.1399-3011.1982.tb03067.x

    Article  CAS  Google Scholar 

  • C Toniolo M Palumbo (1977) ArticleTitleInfrared conformational analysis of homo-oligopeptides in the solid state and in solution Biopolymers 16 219–221 Occurrence Handle843593 Occurrence Handle10.1002/bip.1977.360160116 Occurrence Handle1:CAS:528:DyaE2sXktl2rsrg%3D

    Article  PubMed  CAS  Google Scholar 

  • T Vojkovsky (1995) ArticleTitleDetection of secondary amines on solid phase Pept Res 4 236–239

    Google Scholar 

  • T Wöhr F Wahl A Nefzi T Sato M Mutter (1996) ArticleTitlePseudo-proline as a solubilizing, structure-disrupting protection technique in peptide synthesis J Am Chem Soc 118 9218–9227 Occurrence Handle10.1021/ja961509q

    Article  Google Scholar 

  • Zhang L (1994) In: Epton R (ed) Innovations and perspectives is solid phase synthesis. Proceedings of the 3rd International Symposium. Mayflower Scientific Ltd., Birmingham, pp 711–713

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Abdel Rahman, S., El-Kafrawy, A., Hattaba, A. et al. Optimization of solid-phase synthesis of difficult peptide sequences via comparison between different improved approaches. Amino Acids 33, 531–536 (2007). https://doi.org/10.1007/s00726-006-0387-x

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