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Characterization of a new apscaviroid from American persimmon

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Abstract

A unique circular molecule of 358 nucleotides was detected in American persimmon (Diospyros virginiana L.). The molecule was graft-transmissible and had genetic characteristics of members of the genus Apscaviroid. It had the highest sequence similarity (72-73 %) to citrus viroid VI (CVd-VI) and formed a clade with CVd-VI, citrus dwarfing viroid, and apple dimple fruit viroid in a phylogenetic tree. The molecule was not detected in citrus, unlike CVd-VI, which infects citrus and persimmon, and it was genetically distant from persimmon latent viroid, which infects persimmon only. The genetic and biological features indicated that the molecule may be a member of a new apscaviroid species.

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Acknowledgments

The authors thank Dr. A. Kono for persimmons, and Dr. Nakaune for technical advice.

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Correspondence to Takao Ito.

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Ito, T., Suzaki, K., Nakano, M. et al. Characterization of a new apscaviroid from American persimmon. Arch Virol 158, 2629–2631 (2013). https://doi.org/10.1007/s00705-013-1772-x

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  • DOI: https://doi.org/10.1007/s00705-013-1772-x

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