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Recent Korean isolates of duck hepatitis virus reveal the presence of a new geno- and serotype when compared to duck hepatitis virus type 1 type strains

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An Erratum to this article was published on 01 January 2008

Summary

Duck hepatitis was first reported in 1985 in Korea. The complete nucleotide sequence of two past Korean isolates, DHV-HS and DHV-HSS, isolated in 1994 and 1995, and four recent Korean isolates, AP-03337, AP-04009, AP-04114 and AP-04203 isolated in 2003 and 2004, were determined. Phylogenetic analysis using the 3D protein sequence confirmed that the previously characterized duck hepatitis virus type 1 strains and the six Korean isolates described here constitute a monophyletic group and form two clades/genotypes in which all except the four recent Korean isolates form one group (A) and the recent Korean isolates of 2003 and 2004 constitute a second group (B). Phylogenetic analysis of the VP1 protein supported the division into two different groups. Antisera raised against viruses of group A showed significant neutralizing cross-reaction against a member of the same genotype but not to a strain of group B and vice versa. These results demonstrated that the two genotypes also could be regarded as two different serotypes.

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References

  • SF Altschul TL Madden AA Schaffer J Zhang Z Zhang W Miller DJ Lipman (1997) ArticleTitleGapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389–3402 Occurrence Handle9254694 Occurrence Handle10.1093/nar/25.17.3389 Occurrence Handle1:CAS:528:DyaK2sXlvFyhu7w%3D

    Article  PubMed  CAS  Google Scholar 

  • SK Bohlander R Espinosa SuffixIII MM Le Beau JD Rowley MO Diaz (1992) ArticleTitleA method for the rapid sequence-independent amplification of microdissected chromosomal material Genomics 13 1322–1324 Occurrence Handle1505965 Occurrence Handle10.1016/0888-7543(92)90057-Y Occurrence Handle1:CAS:528:DyaK3sXhs1Wrtr4%3D

    Article  PubMed  CAS  Google Scholar 

  • B Brown MS Oberste K Maher MA Pallansch (2003) ArticleTitleComplete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region J Virol 77 8973–8984 Occurrence Handle12885914 Occurrence Handle10.1128/JVI.77.16.8973-8984.2003 Occurrence Handle1:CAS:528:DC%2BD3sXmt1Sitb8%3D

    Article  PubMed  CAS  Google Scholar 

  • C Ding D Zhang (2007) ArticleTitleMolecular analysis of duck hepatitis virus type 1 Virology 361 9–17 Occurrence Handle17300822 Occurrence Handle10.1016/j.virol.2007.01.007 Occurrence Handle1:CAS:528:DC%2BD2sXkt1ajtLo%3D

    Article  PubMed  CAS  Google Scholar 

  • E Domingo MG Mateu C Escarmis E Martinez-Salas D Andreu E Giralt N Verdaguer I Fita (1995) ArticleTitleMolecular evolution of aphthoviruses Virus Genes 11 197–207 Occurrence Handle8828146 Occurrence Handle10.1007/BF01728659 Occurrence Handle1:CAS:528:DyaK28Xkt1Wnsb4%3D

    Article  PubMed  CAS  Google Scholar 

  • J Fabricant CG Rickard PP Levine (1957) ArticleTitleThe pathology of duck virus hepatitis Avian Dis 1 256–275 Occurrence Handle10.2307/1587740

    Article  Google Scholar 

  • J Felsenstein (1985) ArticleTitleConfidence limits on phylogenies: an approach using the bootstrap Evolution 39 783–791 Occurrence Handle10.2307/2408678

    Article  Google Scholar 

  • RE Gough MS Collins E Borland IF Keymer (1984) ArticleTitleAstrovirus-like particles associated with hepatitis in ducklings Vet Rec 114 279 Occurrence Handle6424324 Occurrence Handle1:STN:280:DyaL2c7ntl2ktQ%3D%3D

    PubMed  CAS  Google Scholar 

  • M Gromeier E Wimmer AE Gorbalenya (1999) Genetics, pathogenesis and evolution of picornaviruses E Domingo R Webster J Holland (Eds) Origin and evolution of viruses Academic Press San Diego 287–343

    Google Scholar 

  • S Guindon O Gascuel (2003) ArticleTitleA simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Syst Biol 52 696–704 Occurrence Handle14530136 Occurrence Handle10.1080/10635150390235520

    Article  PubMed  Google Scholar 

  • SA Haider BW Calnek (1979) ArticleTitleIn vitro isolation, propagation, and characterization of duck hepatitis virus type III Avian Dis 23 715–729 Occurrence Handle230809 Occurrence Handle10.2307/1589748 Occurrence Handle1:STN:280:DyaL3c7gvV2rsg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • TA Hall (1999) ArticleTitleBioedit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT Nucleic Acids Symp Ser 41 95–98 Occurrence Handle1:CAS:528:DC%2BD3cXhtVyjs7Y%3D

    CAS  Google Scholar 

  • JA Huang N Ficorilli CA Hartley RS Wilcox M Weiss MJ Studdert (2001) ArticleTitleEquine rhinitis B virus: a new serotype J Gen Virol 82 2641–2645 Occurrence Handle11602775 Occurrence Handle1:CAS:528:DC%2BD3MXotlanurs%3D

    PubMed  CAS  Google Scholar 

  • S Johansson B Niklasson J Maizel AE Gorbalenya AM Lindberg (2002) ArticleTitleMolecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins J Virol 76 8920–8930 Occurrence Handle12163611 Occurrence Handle10.1128/JVI.76.17.8920-8930.2002 Occurrence Handle1:CAS:528:DC%2BD38Xmt1eqsro%3D

    Article  PubMed  CAS  Google Scholar 

  • ES Johansson B Niklasson RB Tesh DR Shafren AP Travassos da Rosa AM Lindberg (2003) ArticleTitleMolecular characterization of M1146, an American isolate of Ljungan virus (LV) reveals the presence of a new LV genotype J Gen Virol 84 837–844 Occurrence Handle12655084 Occurrence Handle10.1099/vir.0.18792-0 Occurrence Handle1:CAS:528:DC%2BD3sXjtVWquro%3D

    Article  PubMed  CAS  Google Scholar 

  • DT Jones WR Taylor JM Thornton (1992) ArticleTitleThe rapid enumeration of mutation data matrices from protein sequences Comput Appl Biosci 8 275–282 Occurrence Handle1633570 Occurrence Handle1:CAS:528:DyaK38Xlt1Okt7w%3D

    PubMed  CAS  Google Scholar 

  • MC Kim YK Kwon SJ Joh AM Lindberg JH Kwon JH Kim SJ Kim (2006) ArticleTitleMolecular analysis of duck hepatitis virus type 1 reveals a novel lineage close to the genus Parechovirus in the family Picornaviridae J Gen Virol 87 3307–3316 Occurrence Handle17030865 Occurrence Handle10.1099/vir.0.81804-0 Occurrence Handle1:CAS:528:DC%2BD28XhtFGhsbnK

    Article  PubMed  CAS  Google Scholar 

  • M Kimura (1980) ArticleTitleA simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences J Mol Evol 16 111–120 Occurrence Handle7463489 Occurrence Handle10.1007/BF01731581 Occurrence Handle1:CAS:528:DyaL3MXmtFSktg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • NJ Knowles AR Samuel (2003) ArticleTitleMolecular epidemiology of foot-and-mouth disease virus Virus Res 91 65–80 Occurrence Handle12527438 Occurrence Handle10.1016/S0168-1702(02)00260-5 Occurrence Handle1:CAS:528:DC%2BD3sXjtF2msg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • H Kopecka B Brown M Pallansch (1995) ArticleTitleGenotypic variation in coxsackievirus B5 isolates from three different outbreaks in the United States Virus Res 38 125–136 Occurrence Handle8578854 Occurrence Handle10.1016/0168-1702(95)00055-U Occurrence Handle1:CAS:528:DyaK2MXosVOktLg%3D

    Article  PubMed  CAS  Google Scholar 

  • PP Levine J Fabricant (1950) ArticleTitleA hitherto-undescribed virus disease of ducks in North America Cornell Vet 40 71–86

    Google Scholar 

  • Levine PP, Hofstad MS (1945) Duck disease investigation. Annual Report of the New York State Veterinary College, Ithaca, pp 55–56

  • KS Lole RC Bollinger RS Paranjape D Gadkari SS Kulkarni NG Novak R Ingersoll HW Sheppard SC Ray (1999) ArticleTitleFull-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination J Virol 73 152–160 Occurrence Handle9847317 Occurrence Handle1:CAS:528:DyaK1cXotFSlu70%3D

    PubMed  CAS  Google Scholar 

  • KB Nicholas HB Nicholas SuffixJr DW Deerfield (1997) ArticleTitleGeneDoc: analysis and visualization of genetic variation EMBNET News 4 1–4

    Google Scholar 

  • MS Oberste K Maher DR Kilpatrick MR Flemister BA Brown MA Pallansch (1999) ArticleTitleTyping of human enteroviruses by partial sequencing of VP1 J Clin Microbiol 37 1288–1293 Occurrence Handle10203472 Occurrence Handle1:CAS:528:DyaK1MXivFyhsbY%3D

    PubMed  CAS  Google Scholar 

  • MS Oberste K Maher MR Flemister G Marchetti DR Kilpatrick MA Pallansch (2000) ArticleTitleComparison of classic and molecular approaches for the identification of untypeable enteroviruses J Clin Microbiol 38 1170–1174 Occurrence Handle10699015 Occurrence Handle1:CAS:528:DC%2BD3cXitVels78%3D

    PubMed  CAS  Google Scholar 

  • MS Oberste WA Nix K Maher MA Pallansch (2003) ArticleTitleImproved molecular identification of enteroviruses by RT-PCR and amplicon sequencing J Clin Virol 26 375–377 Occurrence Handle12637088 Occurrence Handle10.1016/S1386-6532(03)00004-0 Occurrence Handle1:CAS:528:DC%2BD3sXhvFaisLs%3D

    Article  PubMed  CAS  Google Scholar 

  • MS Oberste K Maher MA Pallansch (2004) ArticleTitleEvidence for frequent recombination within species human enterovirus B based on complete genomic sequences of all thirty-seven serotypes J Virol 78 855–867 Occurrence Handle14694117 Occurrence Handle10.1128/JVI.78.2.855-867.2004 Occurrence Handle1:CAS:528:DC%2BD2cXjvFeisA%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • MS Oberste K Maher SM Michele G Belliot M Uddin MA Pallansch (2005) ArticleTitleEnteroviruses 76, 89, 90 and 91 represent a novel group within the species Human enterovirus Am J Gen Virol 86 445–451 Occurrence Handle10.1099/vir.0.80475-0 Occurrence Handle1:CAS:528:DC%2BD2MXhtFeqsr0%3D

    Article  CAS  Google Scholar 

  • G Oprisan M Combiescu S Guillot V Caro A Combiescu F Delpeyroux R Crainic (2002) ArticleTitleNatural genetic recombination between co-circulating heterotypic enteroviruses J Gen Virol 83 2193–2200 Occurrence Handle12185273 Occurrence Handle1:CAS:528:DC%2BD38XntFaisbw%3D

    PubMed  CAS  Google Scholar 

  • NY Park (1985) ArticleTitleOccurrence of duck virus hepatitis in Korea Kor J Vet Res 25 171–174

    Google Scholar 

  • G Perriere M Gouy (1996) ArticleTitleWWW-Query: an on-line retrieval system for biological sequence banks Biochimie 78 364–369 Occurrence Handle8905155 Occurrence Handle10.1016/0300-9084(96)84768-7 Occurrence Handle1:CAS:528:DyaK28XmvVCmuro%3D

    Article  PubMed  CAS  Google Scholar 

  • T Pöyry L Kinnunen T Hyypiä B Brown C Horsnell T Hovi G Stanway (1996) ArticleTitleGenetic and phylogenetic clustering of enteroviruses J Gen Virol 77 1699–1717 Occurrence Handle8760417

    PubMed  Google Scholar 

  • SBV Rao BR Gupta (1967) ArticleTitleStudies on a filterable agent causing hepatitis in duckling, and biliary cirrhosis and blood dyscrasia in adults Indian J Poult Sci 2 18–30

    Google Scholar 

  • LJ Reed H Muench (1938) ArticleTitleA simple method for estimating fifty percent endpoints Am J Hyg 27 493–497

    Google Scholar 

  • BH Robertson RW Jansen B Khanna A Totsuka OV Nainan G Siegl A Widell HS Margolis S Isomura K Ito T Ishizu Y Moritsugu SM Lemon (1992) ArticleTitleGenetic relatedness of hepatitis A virus strains recovered from different geographical regions J Gen Virol 73 1365–1377 Occurrence Handle1318940 Occurrence Handle1:CAS:528:DyaK38XksVCgtLs%3D Occurrence Handle10.1099/0022-1317-73-6-1365

    Article  PubMed  CAS  Google Scholar 

  • MJ Rodrigo J Dopazo (1995) ArticleTitleEvolutionary analysis of the picornavirus family J Mol Evol 40 362–371 Occurrence Handle7769613 Occurrence Handle10.1007/BF00164022 Occurrence Handle1:CAS:528:DyaK2MXltVeksbo%3D

    Article  PubMed  CAS  Google Scholar 

  • MG Rossmann E Arnold JW Erickson EA Frankenberger JP Griffith HJ Hecht JE Johnson G Kamer M Luo AG Mosser RR Rueckert B Sherry G Vriend (1985) ArticleTitleStructure of a human common cold virus and functional relationship to other picornaviruses Nature 317 145–153 Occurrence Handle2993920 Occurrence Handle10.1038/317145a0 Occurrence Handle1:CAS:528:DyaL2MXlsFOjsr0%3D

    Article  PubMed  CAS  Google Scholar 

  • MM Rweyemamu JC Booth M Head TW Pay (1978) ArticleTitleMicroneutralization tests for serological typing and subtyping of foot-and-mouth disease virus strains J Hyg 81 107–123 Occurrence Handle1:STN:280:DyaE1M%2Fgs1egtA%3D%3D Occurrence Handle10.1017/S002217240005381X

    Article  CAS  Google Scholar 

  • TS Sandhu BW Calnek L Zeman (1992) ArticleTitlePathology and serologic characterization of a variant of duck hepatitis type I virus Avian Dis 36 932–936 Occurrence Handle1485876 Occurrence Handle10.2307/1591552 Occurrence Handle1:STN:280:DyaK3s7jsFOgsA%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • J Santti H Harvala L Kinnunen T Hyypia (2000) ArticleTitleMolecular epidemiology and evolution of coxsackievirus A9 J Gen Virol 81 1361–1372 Occurrence Handle10769080 Occurrence Handle1:CAS:528:DC%2BD3cXjtFWks7c%3D

    PubMed  CAS  Google Scholar 

  • C Savolainen S Blomqvist MN Mulders T Hovi (2002) ArticleTitleGenetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70 J Gen Virol 83 333–340 Occurrence Handle11807226 Occurrence Handle1:CAS:528:DC%2BD38XhtFGhsbY%3D

    PubMed  CAS  Google Scholar 

  • MA Shalaby MNK Ayoub IM Reda (1978) ArticleTitleA study on a new isolate of duck hepatitis virus and its relationship to other duck hepatitis virus strains Vet Med J Cairo Univ 26 215–221

    Google Scholar 

  • HW Sung JH Kim (2000) ArticleTitleIsolation of duck hepatitis virus and its attenuation in chicken embryos Kor J Vet Res 40 101–109

    Google Scholar 

  • HW Sung JH Kim CS Song MK Han YJ Lee IP Mo KS Kim (2000) ArticleTitleDevelopment of a live vaccine strain of duck viral hepatitis using a Korean isolate Kor J Vet Res 40 110–106

    Google Scholar 

  • NM Tauraso GE Coghill MJ Klutch (1969) ArticleTitleProperties of the attenuated vaccine strain of duck hepatitis virus Avian Dis 13 321–329 Occurrence Handle5796731 Occurrence Handle10.2307/1588500 Occurrence Handle1:STN:280:DyaF1M3ktFemsg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • E Tempel J Beer (1968) Die virushepatitis der enten H Rohrer (Eds) Handbuch der Virusinfektionen bei Tieren Fischer Jena, Germany 1019–1032

    Google Scholar 

  • TE Toth (1970) ArticleTitleImmunologic and serologic response of white Pekin ducklings inoculated with single and combined duck virus hepatitis and duck virus enteritis modified-live-virus vaccines Avian Dis 14 697–705 Occurrence Handle4323096 Occurrence Handle10.2307/1588641 Occurrence Handle1:STN:280:DyaE3M7jtF2isQ%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • CH Tseng NJ Knowles HJ Tsai (2007) ArticleTitleMolecular analysis of duck hepatitis virus type 1 indicates that it should be assigned to a new genus Virus Res 123 190–203 Occurrence Handle17067712 Occurrence Handle10.1016/j.virusres.2006.09.007 Occurrence Handle1:CAS:528:DC%2BD2sXkvFGrsg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • CH Tseng HJ Tsai (2007) ArticleTitleMolecular characterization of a new serotype of duck hepatitis virus Virus Res 126 19–31 Occurrence Handle17292992 Occurrence Handle10.1016/j.virusres.2007.01.012 Occurrence Handle1:CAS:528:DC%2BD2sXlsFGrtbc%3D

    Article  PubMed  CAS  Google Scholar 

  • A Varrasso HE Drummer JA Huang RA Stevenson N Ficorilli MJ Studdert CA Hartley (2001) ArticleTitleSequence conservation and antigenic variation of the structural proteins of equine rhinitis A virus J Virol 75 10550–10556 Occurrence Handle11581430 Occurrence Handle10.1128/JVI.75.21.10550-10556.2001 Occurrence Handle1:CAS:528:DC%2BD3MXns1Whu74%3D

    Article  PubMed  CAS  Google Scholar 

  • D Wang L Coscoy M Zylberberg PC Avila HA Boushey D Ganem JL DeRisi (1992) ArticleTitleMicroarray-based detection and genotyping of viral pathogens Proc Natl Acad Sci 99 15678–15692

    Google Scholar 

  • P Wildy (1971) ArticleTitleClassification and nomenclature of viruses Monogr Virol 5 1–118

    Google Scholar 

  • Woolcock PR, Fabricant F (1991) Duck virus hepatitis. In: Calnek BW, Barnes HJ, Beard CW, Reed WM, Yoder HW (9th eds) Disease of poultry. Iowa State University Press, Iowa, pp. 597–608

  • Woolcock PR (2003) Duck hepatitis. In: Saif YM, Barnes HJ, Glisson JR, Fadly AM, McDougald LR, Swayne DE (11th eds) Disease of poultry. Iowa State University Press, Iowa, pp. 342–354

  • G Wutz H Auer N Nowotny B Grosse T Skern E Kuechler (1996) ArticleTitleEquine rhinoviruses serotypes 1 and 2: relationship to each other and to aphthoviruses and cardioviruses J Gen Virol 77 1719–1730 Occurrence Handle8760418 Occurrence Handle1:CAS:528:DyaK28Xks1Omsb4%3D

    PubMed  CAS  Google Scholar 

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An erratum to this article is available at http://dx.doi.org/10.1007/s00705-007-1104-0.

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Kim, MC., Kwon, YK., Joh, SJ. et al. Recent Korean isolates of duck hepatitis virus reveal the presence of a new geno- and serotype when compared to duck hepatitis virus type 1 type strains. Arch Virol 152, 2059–2072 (2007). https://doi.org/10.1007/s00705-007-1023-0

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