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Molecular characterization of enteroviruses isolated from patients with aseptic meningitis in Korea, 2005

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Summary.

Enteroviruses are the most common causative agents of aseptic meningitis. In 2005, an outbreak of aseptic meningitis occurred in Seoul, Korea, which appeared to be caused by certain enterovirus strains. This study analyzed the clinical isolates from 24 different aseptic meningitis patients at our center from January to September 2005. Serotyping using type-specific antisera, RT-PCR, and direct sequencing of the 5′ noncoding and VP1 regions were carried out. The serotyping study identified 15 coxsackievirus B5 (CBV5), 4 coxsackievirus B1 (CBV1), 1 coxsackievirus B3 (CBV3) and 4 echovirus 9 (ECV9). Phylogenic analysis of the VP1 region revealed CBV5 to be the most predominant strain (15 strains). Twelve of these strains were grouped together with recent strains isolated in China and France. The 12 CBV5 strains contained a novel amino acid change in the BC-loop (the 90th and 91st, AY→GN) compared to the reference strain (1954/UK/85). The amino acid changes in the BC-loop in some recent CBV5 strains tend to be located in the C-terminal part, and these changes suggest some antigenic significance.

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References

  • A Georgopoulou P Markoulatos N Spyrou NC Vamvakopoulos (2000) ArticleTitleImproved genotyping vaccine and wild-type poliovirus strains by restriction fragment length polymorphism analysis: clinical diagnostic implications J Clin Microbiol 38 4337–4342 Occurrence Handle1:CAS:528:DC%2BD3MXislCltLc%3D Occurrence Handle11101561

    CAS  PubMed  Google Scholar 

  • BB Hamby MA Pallansch OM Kew (1987) ArticleTitleReemergence of an epidemic coxsackievirus B5 genotype J Infect Dis 156 288–292 Occurrence Handle1:STN:280:DyaL2s3lt1Chuw%3D%3D Occurrence Handle3036966

    CAS  PubMed  Google Scholar 

  • YT Jung GR Kim SY Paik (1998) ArticleTitleMolecular biological characterization of enterovirus variant isolated from patients with aseptic meningitis Exp Mol Med 30 101–107 Occurrence Handle1:CAS:528:DyaK1cXks1arsLc%3D Occurrence Handle9873830

    CAS  PubMed  Google Scholar 

  • H Kopecka B Brown M Pallansch (1995) ArticleTitleGenotypic variation in coxsackievirus B5 isolates from three different outbreaks in the United States Virus Res 38 125–136 10.1016/0168-1702(95)00055-U Occurrence Handle10.1016/0168-1702(95)00055-U Occurrence Handle1:CAS:528:DyaK2MXosVOktLg%3D Occurrence Handle8578854

    Article  CAS  PubMed  Google Scholar 

  • AM Lindberg C Polacek (2000) ArticleTitleMolecular analysis of the prototype coxsackievirus B5 genome Arch Virol 145 205–221 10.1007/s007050050019 Occurrence Handle10.1007/s007050050019 Occurrence Handle1:CAS:528:DC%2BD3cXitFeksbw%3D Occurrence Handle10752549

    Article  CAS  PubMed  Google Scholar 

  • MG Mateu (1995) ArticleTitleAntibody recognition of picornaviruses and escape from neutralization: a structural view Virus Res 38 1–24 10.1016/0168-1702(95)00048-U Occurrence Handle10.1016/0168-1702(95)00048-U Occurrence Handle1:CAS:528:DyaK2MXotVegurk%3D Occurrence Handle8546007

    Article  CAS  PubMed  Google Scholar 

  • F McPhee R Zell BY Reimann PH Hofschneider R Kandolf (1994) ArticleTitleCharacterization of the N-terminal part of the neutralizing antigenic site I of coxsackievirus B4 by mutation analysis of antigen chimeras Virus Res 34 139–151 10.1016/0168-1702(94)90096-5 Occurrence Handle10.1016/0168-1702(94)90096-5 Occurrence Handle1:CAS:528:DyaK2MXitF2qtr8%3D Occurrence Handle7531922

    Article  CAS  PubMed  Google Scholar 

  • PD Minor P Muir (2004) Principles and practice of clinical virology Wiley Chichester

    Google Scholar 

  • P Muir U Kammerer K Korn MN Mulders T Poyry B Weissbrich R Kandolf GM Cleator AM van Loon (1998) ArticleTitleMolecular typing of enteroviruses: current status and future requirements. The European Union Concerted Action on Virus Meningitis and Encephalitis Clin Microbiol Rev 11 202–227 Occurrence Handle1:STN:280:DyaK1c7hvVOmuw%3D%3D Occurrence Handle9457433

    CAS  PubMed  Google Scholar 

  • H Norder L Bjerregaard L Magnius B Lina M Aymard JJ Chomel (2003) ArticleTitleSequencing of ‘untypable’ enteroviruses reveals two new types, EV-77 and EV-78, within human enterovirus type B and substitutions in the BC loop of the VP1 protein for known types J Gen Virol 84 827–836 10.1099/vir.0.18647-0 Occurrence Handle10.1099/vir.0.18647-0 Occurrence Handle1:CAS:528:DC%2BD3sXjtVWqur0%3D Occurrence Handle12655083

    Article  CAS  PubMed  Google Scholar 

  • MS Oberste K Maher DR Kilpatrick MR Flemister BA Brown MA Pallansch (1999) ArticleTitleTyping of human enteroviruses by partial sequencing of VP1 J Clin Microbiol 37 1288–1293 Occurrence Handle1:CAS:528:DyaK1MXivFyhsbY%3D Occurrence Handle10203472

    CAS  PubMed  Google Scholar 

  • MS Oberste K Maher DR Kilpatrick MA Pallansch (1999) ArticleTitleMolecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification J Virol 73 1941–1948 Occurrence Handle1:CAS:528:DyaK1MXhvVWns7s%3D Occurrence Handle9971773

    CAS  PubMed  Google Scholar 

  • MS Oberste WA Nix K Maher MA Pallansch (2003) ArticleTitleImproved molecular identification of enteroviruses by RT-PCR and amplicon sequencing J Clin Virol 26 375–377 10.1016/S1386-6532(03)00004-0 Occurrence Handle10.1016/S1386-6532(03)00004-0 Occurrence Handle1:CAS:528:DC%2BD3sXhvFaisLs%3D Occurrence Handle12637088

    Article  CAS  PubMed  Google Scholar 

  • MA Pallansch (1997) ArticleTitleCoxsackievirus B epidemiology and public health concerns Curr Top Microbiol Immunol 223 13–30 Occurrence Handle1:STN:280:DyaK2svktVOhsg%3D%3D Occurrence Handle9294923

    CAS  PubMed  Google Scholar 

  • HA Rotbart MH Sawyer S Fast C Lewinski N Murphy EF Keyser J Spadoro SY Kao M Loeffelholz (1994) ArticleTitleDiagnosis of enteroviral meningitis by using PCR with a colorimetric microwell detection assay J Clin Microbiol 32 2590–2592 Occurrence Handle1:STN:280:DyaK2M7htl2rsA%3D%3D Occurrence Handle7814507

    CAS  PubMed  Google Scholar 

  • HJ Stirk JM Thornton (1994) ArticleTitleThe BC loop in poliovirus coat protein VP1: an ideal acceptor site for major insertions Protein Eng 7 47–56 10.1093/protein/7.1.47 Occurrence Handle10.1093/protein/7.1.47 Occurrence Handle1:CAS:528:DyaK2cXpvFyjtQ%3D%3D Occurrence Handle7511245

    Article  CAS  PubMed  Google Scholar 

  • TA Tatusova TL Madden (1999) ArticleTitleBLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences FEMS Microbiol Lett 174 247–250 10.1111/j.1574-6968.1999.tb13575.x Occurrence Handle10.1111/j.1574-6968.1999.tb13575.x Occurrence Handle1:CAS:528:DyaK1MXjtlOlu74%3D Occurrence Handle10339815

    Article  CAS  PubMed  Google Scholar 

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Lee, ST., Ki, CS. & Lee, N. Molecular characterization of enteroviruses isolated from patients with aseptic meningitis in Korea, 2005. Arch Virol 152, 963–970 (2007). https://doi.org/10.1007/s00705-006-0901-1

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