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Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1

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Abstract

Members of the YABBY gene family have a general role that promotes abaxial cell fate in a model eudicot, Arabidopsis thaliana. To understand the function of YABBY genes in monocots, we have isolated all YABBY genes in Oryza sativa (rice), and revealed the spatial and temporal expression pattern of one of these genes, OsYABBY1. In rice, eight YABBY genes constitute a small gene family and are classified into four groups according to sequence similarity, exon–intron structure, and organ-specific expression patterns. OsYABBY1 shows unique spatial expression patterns that have not previously been reported for other YABBY genes, so far. OsYABBY1 is expressed in putative precursor cells of both the mestome sheath in the large vascular bundle and the abaxial sclerenchyma in the leaves. In the flower, OsYABBY1 is specifically expressed in the palea and lemma from their inception, and is confined to several cell layers of these organs in the later developmental stages. The OsYABBY1-expressing domains are closely associated with cells that subsequently differentiate into sclerenchymatous cells. These findings suggest that the function of OsYABBY1 is involved in regulating the differentiation of a few specific cell types and is unrelated to polar regulation of lateral organ development.

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Acknowledgments

We thank K. Ohsawa for technical assistance. This research was partly supported by Grants-in-Aid for Scientific Research (14036265, 17027009, 17208002) from the Ministry of Education, Culture, Sports, Science and Technology.

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Authors and Affiliations

  1. Graduate School of Science, University of Tokyo, Bunkyo-ku, Tokyo, 113-8654, Japan

    Taiyo Toriba, Takuya Suzaki & Hiro-Yuki Hirano

  2. Graduate School of Agricultural and Life Sciences, University of Tokyo, Bunkyo-ku, Tokyo, 113-8657, Japan

    Kohsuke Harada, Atsushi Takamura & Hiro-Yuki Hirano

  3. National Institute of Agrobiological Sciences, Kannondai, Tsukuba, 305-0856, Japan

    Hidemitsu Nakamura & Hiroaki Ichikawa

Authors
  1. Taiyo Toriba
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  2. Kohsuke Harada
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  3. Atsushi Takamura
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  4. Hidemitsu Nakamura
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  5. Hiroaki Ichikawa
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  6. Takuya Suzaki
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  7. Hiro-Yuki Hirano
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Correspondence to Hiro-Yuki Hirano.

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Communicated by R. Hagemann.

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Toriba, T., Harada, K., Takamura, A. et al. Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1 . Mol Genet Genomics 277, 457–468 (2007). https://doi.org/10.1007/s00438-006-0202-0

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  • DOI: https://doi.org/10.1007/s00438-006-0202-0

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